RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 RRS1Q15050 365 aaKnown RBP22.96■■□□□ 1.27
LSM14A-208ENST00000590416 CC2D1BQ5T0F9 858 aaKnown RBP22.96■■□□□ 1.27
LSM14A-208ENST00000590416 COL18A1P39060 1754 aa22.96■■□□□ 1.27
LSM14A-208ENST00000590416 PER1O15534 1290 aaPredicted RBP22.95■■□□□ 1.26
LSM14A-208ENST00000590416 ATRNO75882 1429 aa22.95■■□□□ 1.26
LSM14A-208ENST00000590416 MAP2P11137 1827 aaKnown RBP22.95■■□□□ 1.26
LSM14A-208ENST00000590416 DDX10Q13206 875 aaKnown RBP22.95■■□□□ 1.26
LSM14A-208ENST00000590416 CAMTA1Q9Y6Y1 1673 aa22.95■■□□□ 1.26
LSM14A-208ENST00000590416 AMER1Q5JTC6 1135 aaPredicted RBP22.94■■□□□ 1.26
LSM14A-208ENST00000590416 MAP3K19Q56UN5 1328 aa22.93■■□□□ 1.26
LSM14A-208ENST00000590416 CSB-PGBD3P0DP91 1061 aa22.92■■□□□ 1.26
LSM14A-208ENST00000590416 RXRBP28702 533 aa22.92■■□□□ 1.26
LSM14A-208ENST00000590416 ABCC6O95255 1503 aa22.92■■□□□ 1.26
LSM14A-208ENST00000590416 COL5A2P05997 1499 aaPredicted RBP22.92■■□□□ 1.26
LSM14A-208ENST00000590416 PPM1GO15355 546 aaPredicted RBP22.91■■□□□ 1.26
LSM14A-208ENST00000590416 VPS72Q15906 364 aa22.91■■□□□ 1.26
LSM14A-208ENST00000590416 AXIN2Q9Y2T1 843 aa22.91■■□□□ 1.26
LSM14A-208ENST00000590416 RBM6P78332 1123 aaKnown RBP22.9■■□□□ 1.26
LSM14A-208ENST00000590416 GJD4Q96KN9 370 aaPredicted RBP22.89■■□□□ 1.25
LSM14A-208ENST00000590416 HOXC9P31274 260 aa22.88■■□□□ 1.25
LSM14A-208ENST00000590416 LARP1Q6PKG0 1096 aaKnown RBP22.88■■□□□ 1.25
LSM14A-208ENST00000590416 IP6K1Q92551 441 aa22.88■■□□□ 1.25
LSM14A-208ENST00000590416 LTV1Q96GA3 475 aaPredicted RBP22.88■■□□□ 1.25
LSM14A-208ENST00000590416 USP35Q9P2H5 1018 aa22.88■■□□□ 1.25
LSM14A-208ENST00000590416 EMILIN1Q9Y6C2 1016 aa22.88■■□□□ 1.25
LSM14A-208ENST00000590416 RTL1A6NKG5 1358 aa22.88■■□□□ 1.25
LSM14A-208ENST00000590416 TOM1L2Q6ZVM7 507 aa22.87■■□□□ 1.25
LSM14A-208ENST00000590416 NPC1L1Q9UHC9 1359 aa22.87■■□□□ 1.25
LSM14A-208ENST00000590416 PEAK1Q9H792 1746 aa22.86■■□□□ 1.25
LSM14A-208ENST00000590416 GLI3P10071 1580 aa22.86■■□□□ 1.25
LSM14A-208ENST00000590416 BLMP54132 1417 aaPredicted RBP22.86■■□□□ 1.25
LSM14A-208ENST00000590416 A0A0G2JS52 829 aa22.86■■□□□ 1.25
LSM14A-208ENST00000590416 MYT1Q01538 1121 aa22.86■■□□□ 1.25
LSM14A-208ENST00000590416 ANKRD24Q8TF21 1146 aa22.86■■□□□ 1.25
LSM14A-208ENST00000590416 FLT4P35916 1363 aa22.86■■□□□ 1.25
LSM14A-208ENST00000590416 SPATA31A5Q5VU36 1347 aa22.84■■□□□ 1.25
LSM14A-208ENST00000590416 SPATA31A7Q8IWB4 1347 aa22.84■■□□□ 1.25
LSM14A-208ENST00000590416 WDR17Q8IZU2 1322 aa22.84■■□□□ 1.25
LSM14A-208ENST00000590416 CRB1P82279 1406 aa22.84■■□□□ 1.25
LSM14A-208ENST00000590416 POLKQ9UBT6 870 aa22.83■■□□□ 1.25
LSM14A-208ENST00000590416 ERBB3P21860 1342 aa22.82■■□□□ 1.24
LSM14A-208ENST00000590416 SPATA31A1Q5TZJ5 1347 aa22.82■■□□□ 1.24
LSM14A-208ENST00000590416 SMG6Q86US8 1419 aaKnown RBP22.82■■□□□ 1.24
LSM14A-208ENST00000590416 KIF24Q5T7B8 1368 aa22.82■■□□□ 1.24
LSM14A-208ENST00000590416 FAM98CQ17RN3 349 aaKnown RBP22.81■■□□□ 1.24
LSM14A-208ENST00000590416 ILDR2Q71H61 639 aa22.81■■□□□ 1.24
LSM14A-208ENST00000590416 NLRP2Q9NX02 1062 aa22.81■■□□□ 1.24
LSM14A-208ENST00000590416 FAM208AQ9UK61 1670 aaKnown RBP22.81■■□□□ 1.24
LSM14A-208ENST00000590416 HSP90AB2PQ58FF8 381 aa22.8■■□□□ 1.24
LSM14A-208ENST00000590416 RGPD2P0DJD1 1756 aa22.79■■□□□ 1.24
LSM14A-208ENST00000590416 TCP11L2Q8N4U5 519 aa22.79■■□□□ 1.24
LSM14A-208ENST00000590416 RGS12O14924 1447 aa22.79■■□□□ 1.24
LSM14A-208ENST00000590416 INSRP06213 1382 aa22.78■■□□□ 1.24
LSM14A-208ENST00000590416 CDK12Q9NYV4 1490 aaPredicted RBP22.78■■□□□ 1.24
LSM14A-208ENST00000590416 CARD10Q9BWT7 1032 aa22.76■■□□□ 1.23
LSM14A-208ENST00000590416 THRAP3Q9Y2W1 955 aaKnown RBP22.76■■□□□ 1.23
LSM14A-208ENST00000590416 WNK3Q9BYP7 1800 aa22.75■■□□□ 1.23
LSM14A-208ENST00000590416 MTHFSP49914 203 aa22.75■■□□□ 1.23
LSM14A-208ENST00000590416 SEPT12Q8IYM1 358 aa22.75■■□□□ 1.23
LSM14A-208ENST00000590416 BARGINQ6ZT62 677 aa22.73■■□□□ 1.23
LSM14A-208ENST00000590416 BRWD3Q6RI45 1802 aa22.73■■□□□ 1.23
LSM14A-208ENST00000590416 THSD7AQ9UPZ6 1657 aa22.71■■□□□ 1.23
LSM14A-208ENST00000590416 EIF4A2Q14240 407 aaKnown RBP22.7■■□□□ 1.22
LSM14A-208ENST00000590416 USHBP1Q8N6Y0 703 aa22.7■■□□□ 1.22
LSM14A-208ENST00000590416 PARD3Q8TEW0 1356 aa22.7■■□□□ 1.22
LSM14A-208ENST00000590416 PPP2R1AP30153 589 aa22.69■■□□□ 1.22
LSM14A-208ENST00000590416 NBPF6Q5VWK0 638 aa22.69■■□□□ 1.22
LSM14A-208ENST00000590416 NBPF4Q96M43 638 aa22.69■■□□□ 1.22
LSM14A-208ENST00000590416 ONECUT3O60422 494 aaPredicted RBP22.68■■□□□ 1.22
LSM14A-208ENST00000590416 RALBP1Q15311 655 aa22.68■■□□□ 1.22
LSM14A-208ENST00000590416 PARP4Q9UKK3 1724 aaKnown RBP22.68■■□□□ 1.22
LSM14A-208ENST00000590416 IL2RBP14784 551 aa22.67■■□□□ 1.22
LSM14A-208ENST00000590416 CFAP53Q96M91 514 aa22.67■■□□□ 1.22
LSM14A-208ENST00000590416 CDCA7Q9BWT1 371 aaPredicted RBP22.67■■□□□ 1.22
LSM14A-208ENST00000590416 LRRC37A3O60309 1634 aa22.65■■□□□ 1.22
LSM14A-208ENST00000590416 PDE3BQ13370 1112 aa22.65■■□□□ 1.22
LSM14A-208ENST00000590416 KRT27Q7Z3Y8 459 aa22.65■■□□□ 1.22
LSM14A-208ENST00000590416 DIAPH1O60610 1272 aaKnown RBP22.64■■□□□ 1.21
LSM14A-208ENST00000590416 DDB1Q16531 1140 aa22.64■■□□□ 1.21
LSM14A-208ENST00000590416 EYA1Q99502 592 aa22.64■■□□□ 1.21
LSM14A-208ENST00000590416 DISP2A7MBM2 1401 aa22.64■■□□□ 1.21
LSM14A-208ENST00000590416 RAPGEF4Q8WZA2 1011 aa22.63■■□□□ 1.21
LSM14A-208ENST00000590416 EXOC5O00471 708 aa22.61■■□□□ 1.21
LSM14A-208ENST00000590416 TATP17735 454 aaPredicted RBP22.61■■□□□ 1.21
LSM14A-208ENST00000590416 MYBBP1AQ9BQG0 1328 aaKnown RBP22.6■■□□□ 1.21
LSM14A-208ENST00000590416 IL13P35225 146 aa22.6■■□□□ 1.21
LSM14A-208ENST00000590416 PRKRIP1Q9H875 184 aaPredicted RBP22.6■■□□□ 1.21
LSM14A-208ENST00000590416 IGSF1Q8N6C5 1336 aa22.59■■□□□ 1.21
LSM14A-208ENST00000590416 MEGF6O75095 1541 aa22.59■■□□□ 1.21
LSM14A-208ENST00000590416 U2SURPO15042 1029 aaKnown RBP22.59■■□□□ 1.21
LSM14A-208ENST00000590416 COL3A1P02461 1466 aaPredicted RBP22.59■■□□□ 1.21
LSM14A-208ENST00000590416 TNS2Q63HR2 1409 aa22.58■■□□□ 1.21
LSM14A-208ENST00000590416 ANP32CO43423 234 aa22.58■■□□□ 1.21
LSM14A-208ENST00000590416 FAM182BQ5T319 152 aa22.58■■□□□ 1.21
LSM14A-208ENST00000590416 RGPD1P0DJD0 1748 aa22.57■■□□□ 1.2
LSM14A-208ENST00000590416 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
LSM14A-208ENST00000590416 SULT6B1Q6IMI4 303 aa22.56■■□□□ 1.2
LSM14A-208ENST00000590416 OVOS2A0A0G2JMS6 1433 aa22.56■■□□□ 1.2
LSM14A-208ENST00000590416 NCAPD2Q15021 1401 aa22.56■■□□□ 1.2
LSM14A-208ENST00000590416 HMOX1P09601 288 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms