RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 ANKRD36BQ8N2N9 1353 aa29.93■■■□□ 2.38
LRP3-202ENST00000590275 HSPA5P11021 654 aaKnown RBP29.91■■■□□ 2.38
LRP3-202ENST00000590275 BARGINQ6ZT62 677 aa29.89■■■□□ 2.38
LRP3-202ENST00000590275 FBLN1P23142 703 aa29.88■■■□□ 2.37
LRP3-202ENST00000590275 TCP11L2Q8N4U5 519 aa29.88■■■□□ 2.37
LRP3-202ENST00000590275 CARD14Q9BXL6 1004 aa29.87■■■□□ 2.37
LRP3-202ENST00000590275 CRB1P82279 1406 aa29.87■■■□□ 2.37
LRP3-202ENST00000590275 MYOM1P52179 1685 aa29.85■■■□□ 2.37
LRP3-202ENST00000590275 WDR17Q8IZU2 1322 aa29.84■■■□□ 2.37
LRP3-202ENST00000590275 BLMP54132 1417 aaPredicted RBP29.83■■■□□ 2.37
LRP3-202ENST00000590275 EIF4G2P78344 907 aaKnown RBP eCLIP29.83■■■□□ 2.37
LRP3-202ENST00000590275 FYB1O15117 783 aa29.82■■■□□ 2.36
LRP3-202ENST00000590275 CDCA8Q53HL2 280 aa29.82■■■□□ 2.36
LRP3-202ENST00000590275 RGPD5Q99666 1765 aa29.82■■■□□ 2.36
LRP3-202ENST00000590275 TOM1L2Q6ZVM7 507 aa29.81■■■□□ 2.36
LRP3-202ENST00000590275 DEFB132Q7Z7B7 95 aa29.81■■■□□ 2.36
LRP3-202ENST00000590275 C11orf95C9JLR9 678 aaPredicted RBP29.8■■■□□ 2.36
LRP3-202ENST00000590275 THRAP3Q9Y2W1 955 aaKnown RBP29.8■■■□□ 2.36
LRP3-202ENST00000590275 CCDC125Q86Z20 511 aa29.79■■■□□ 2.36
LRP3-202ENST00000590275 GGNBP2Q9H3C7 697 aa29.79■■■□□ 2.36
LRP3-202ENST00000590275 ABCC6O95255 1503 aa29.76■■■□□ 2.36
LRP3-202ENST00000590275 COG3Q96JB2 828 aa29.76■■■□□ 2.35
LRP3-202ENST00000590275 ERBB3P21860 1342 aa29.74■■■□□ 2.35
LRP3-202ENST00000590275 CARD10Q9BWT7 1032 aa29.74■■■□□ 2.35
LRP3-202ENST00000590275 MAP3K19Q56UN5 1328 aa29.73■■■□□ 2.35
LRP3-202ENST00000590275 DISP2A7MBM2 1401 aa29.73■■■□□ 2.35
LRP3-202ENST00000590275 NSD3Q9BZ95 1437 aa29.73■■■□□ 2.35
LRP3-202ENST00000590275 LTN1O94822 1766 aa29.73■■■□□ 2.35
LRP3-202ENST00000590275 CSB-PGBD3P0DP91 1061 aa29.73■■■□□ 2.35
LRP3-202ENST00000590275 POLR3GLQ9BT43 218 aa29.73■■■□□ 2.35
LRP3-202ENST00000590275 ANKRD24Q8TF21 1146 aa29.71■■■□□ 2.35
LRP3-202ENST00000590275 PARP4Q9UKK3 1724 aaKnown RBP29.71■■■□□ 2.35
LRP3-202ENST00000590275 IP6K1Q92551 441 aa29.7■■■□□ 2.35
LRP3-202ENST00000590275 PDE3BQ13370 1112 aa29.69■■■□□ 2.34
LRP3-202ENST00000590275 RRS1Q15050 365 aaKnown RBP29.69■■■□□ 2.34
LRP3-202ENST00000590275 LRRC37A3O60309 1634 aa29.68■■■□□ 2.34
LRP3-202ENST00000590275 TRIM37O94972 964 aa29.66■■■□□ 2.34
LRP3-202ENST00000590275 HOXC9P31274 260 aa29.66■■■□□ 2.34
LRP3-202ENST00000590275 FAM196AQ6ZSG2 479 aa29.66■■■□□ 2.34
LRP3-202ENST00000590275 NLRP2Q9NX02 1062 aa29.64■■■□□ 2.34
LRP3-202ENST00000590275 WNK3Q9BYP7 1800 aa29.64■■■□□ 2.33
LRP3-202ENST00000590275 SF3B2Q13435 895 aaKnown RBP29.63■■■□□ 2.33
LRP3-202ENST00000590275 DDB1Q16531 1140 aa29.63■■■□□ 2.33
LRP3-202ENST00000590275 MARCH10Q8NA82 808 aaPredicted RBP29.63■■■□□ 2.33
LRP3-202ENST00000590275 LTV1Q96GA3 475 aaPredicted RBP29.63■■■□□ 2.33
LRP3-202ENST00000590275 CCDC7Q96M83 1385 aa29.63■■■□□ 2.33
LRP3-202ENST00000590275 PEAK1Q9H792 1746 aa29.62■■■□□ 2.33
LRP3-202ENST00000590275 TNS1Q9HBL0 1735 aaKnown RBP29.62■■■□□ 2.33
LRP3-202ENST00000590275 EN1Q05925 392 aaPredicted RBP29.62■■■□□ 2.33
LRP3-202ENST00000590275 PANK3Q9H999 370 aa29.61■■■□□ 2.33
LRP3-202ENST00000590275 KIF20BQ96Q89 1820 aa29.61■■■□□ 2.33
LRP3-202ENST00000590275 PTF1AQ7RTS3 328 aa29.6■■■□□ 2.33
LRP3-202ENST00000590275 AMPHP49418 695 aa29.59■■■□□ 2.33
LRP3-202ENST00000590275 CDCA7Q9BWT1 371 aaPredicted RBP29.58■■■□□ 2.33
LRP3-202ENST00000590275 RGPD1P0DJD0 1748 aa29.57■■■□□ 2.32
LRP3-202ENST00000590275 BAG6P46379 1132 aa29.57■■■□□ 2.32
LRP3-202ENST00000590275 SRCAPQ6ZRS2 3230 aa29.57■■■□□ 2.32
LRP3-202ENST00000590275 KIF7Q2M1P5 1343 aa29.56■■■□□ 2.32
LRP3-202ENST00000590275 EMILIN1Q9Y6C2 1016 aa29.56■■■□□ 2.32
LRP3-202ENST00000590275 OVOS2A0A0G2JMS6 1433 aa29.55■■■□□ 2.32
LRP3-202ENST00000590275 EZH2Q15910 746 aaKnown RBP29.55■■■□□ 2.32
LRP3-202ENST00000590275 HSP90AB2PQ58FF8 381 aa29.55■■■□□ 2.32
LRP3-202ENST00000590275 RTL1A6NKG5 1358 aa29.54■■■□□ 2.32
LRP3-202ENST00000590275 CGNL1Q0VF96 1302 aa29.54■■■□□ 2.32
LRP3-202ENST00000590275 CAMKK2Q96RR4 588 aa29.54■■■□□ 2.32
LRP3-202ENST00000590275 TNS2Q63HR2 1409 aa29.54■■■□□ 2.32
LRP3-202ENST00000590275 EXOC5O00471 708 aa29.52■■■□□ 2.32
LRP3-202ENST00000590275 APBA3O96018 575 aa29.52■■■□□ 2.32
LRP3-202ENST00000590275 IL2RBP14784 551 aa29.52■■■□□ 2.32
LRP3-202ENST00000590275 NBPF6Q5VWK0 638 aa29.51■■■□□ 2.31
LRP3-202ENST00000590275 NBPF4Q96M43 638 aa29.51■■■□□ 2.31
LRP3-202ENST00000590275 FAM208AQ9UK61 1670 aaKnown RBP29.5■■■□□ 2.31
LRP3-202ENST00000590275 BCL9O00512 1426 aa29.48■■■□□ 2.31
LRP3-202ENST00000590275 USHBP1Q8N6Y0 703 aa29.48■■■□□ 2.31
LRP3-202ENST00000590275 RGPD2P0DJD1 1756 aa29.48■■■□□ 2.31
LRP3-202ENST00000590275 INSRP06213 1382 aa29.48■■■□□ 2.31
LRP3-202ENST00000590275 FLT4P35916 1363 aa29.47■■■□□ 2.31
LRP3-202ENST00000590275 POLKQ9UBT6 870 aa29.46■■■□□ 2.31
LRP3-202ENST00000590275 MEGF6O75095 1541 aa29.45■■■□□ 2.31
LRP3-202ENST00000590275 KCNQ2O43526 872 aa29.44■■■□□ 2.3
LRP3-202ENST00000590275 TNNT2P45379 298 aaPredicted RBP29.44■■■□□ 2.3
LRP3-202ENST00000590275 KIF24Q5T7B8 1368 aa29.43■■■□□ 2.3
LRP3-202ENST00000590275 SBF2Q86WG5 1849 aa29.43■■■□□ 2.3
LRP3-202ENST00000590275 BCL11BQ9C0K0 894 aaPredicted RBP29.42■■■□□ 2.3
LRP3-202ENST00000590275 PPM1GO15355 546 aaPredicted RBP29.41■■■□□ 2.3
LRP3-202ENST00000590275 ANKRD26Q9UPS8 1709 aa29.4■■■□□ 2.3
LRP3-202ENST00000590275 PSDA5PKW4 1024 aaPredicted RBP29.4■■■□□ 2.3
LRP3-202ENST00000590275 WASHC2AQ641Q2 1341 aa29.4■■■□□ 2.3
LRP3-202ENST00000590275 ACSBG1Q96GR2 724 aa29.39■■■□□ 2.3
LRP3-202ENST00000590275 AMER1Q5JTC6 1135 aaPredicted RBP29.38■■■□□ 2.29
LRP3-202ENST00000590275 PER1O15534 1290 aaPredicted RBP29.37■■■□□ 2.29
LRP3-202ENST00000590275 PROM2Q8N271 834 aa29.37■■■□□ 2.29
LRP3-202ENST00000590275 DDX54Q8TDD1 881 aaKnown RBP29.36■■■□□ 2.29
LRP3-202ENST00000590275 RREB1Q92766 1687 aa29.36■■■□□ 2.29
LRP3-202ENST00000590275 PARD3Q8TEW0 1356 aa29.35■■■□□ 2.29
LRP3-202ENST00000590275 SMG6Q86US8 1419 aaKnown RBP29.35■■■□□ 2.29
LRP3-202ENST00000590275 NSD2O96028 1365 aa29.34■■■□□ 2.29
LRP3-202ENST00000590275 NCAPD2Q15021 1401 aa29.34■■■□□ 2.29
LRP3-202ENST00000590275 PLSCR1O15162 318 aa29.33■■■□□ 2.29
LRP3-202ENST00000590275 R3HDM1Q15032 1099 aaKnown RBP29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms