RNA–Protein interactions for RNA: ENST00000590262.1

SAFB2-206, Transcript of scaffold attachment factor B2, human

TSL 4

Gene SAFB2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB2-206	ENST00000590262	LRP6	O75581	1613 aa		12.15	□□□□□ -0.46
SAFB2-206	ENST00000590262	MAP3K19	Q56UN5	1328 aa		12.15	□□□□□ -0.46
SAFB2-206	ENST00000590262	SPATA31A6	Q5VVP1	1343 aa		12.15	□□□□□ -0.46
SAFB2-206	ENST00000590262	MIER1	Q8N108	512 aa		12.15	□□□□□ -0.46
SAFB2-206	ENST00000590262	CFAP53	Q96M91	514 aa		12.15	□□□□□ -0.46
SAFB2-206	ENST00000590262	CAMTA1	Q9Y6Y1	1673 aa		12.15	□□□□□ -0.46
SAFB2-206	ENST00000590262	DLG5	Q8TDM6	1919 aa		12.15	□□□□□ -0.46
SAFB2-206	ENST00000590262	PARP4	Q9UKK3	1724 aa	Known RBP	12.14	□□□□□ -0.47
SAFB2-206	ENST00000590262	ADAMTS2	O95450	1211 aa		12.14	□□□□□ -0.47
SAFB2-206	ENST00000590262	MTHFS	P49914	203 aa		12.14	□□□□□ -0.47
SAFB2-206	ENST00000590262	MEX3C	Q5U5Q3	659 aa	Known RBP	12.14	□□□□□ -0.47
SAFB2-206	ENST00000590262	PRDM11	Q9NQV5	511 aa		12.14	□□□□□ -0.47
SAFB2-206	ENST00000590262	CPD	O75976	1380 aa		12.14	□□□□□ -0.47
SAFB2-206	ENST00000590262	COL3A1	P02461	1466 aa	Predicted RBP	12.14	□□□□□ -0.47
SAFB2-206	ENST00000590262	BLM	P54132	1417 aa	Predicted RBP	12.13	□□□□□ -0.47
SAFB2-206	ENST00000590262	CHRNA2	Q15822	529 aa		12.13	□□□□□ -0.47
SAFB2-206	ENST00000590262	MRS2	Q9HD23	443 aa		12.13	□□□□□ -0.47
SAFB2-206	ENST00000590262	POLK	Q9UBT6	870 aa		12.13	□□□□□ -0.47
SAFB2-206	ENST00000590262	KIF24	Q5T7B8	1368 aa		12.13	□□□□□ -0.47
SAFB2-206	ENST00000590262	ARHGEF25	Q86VW2	580 aa		12.12	□□□□□ -0.47
SAFB2-206	ENST00000590262	HOXC9	P31274	260 aa		12.11	□□□□□ -0.47
SAFB2-206	ENST00000590262	LTV1	Q96GA3	475 aa	Predicted RBP	12.11	□□□□□ -0.47
SAFB2-206	ENST00000590262	COL5A2	P05997	1499 aa	Predicted RBP	12.1	□□□□□ -0.47
SAFB2-206	ENST00000590262	INSR	P06213	1382 aa		12.09	□□□□□ -0.47
SAFB2-206	ENST00000590262	CCER2	I3L3R5	266 aa		12.09	□□□□□ -0.47
SAFB2-206	ENST00000590262	HSP90AB2P	Q58FF8	381 aa		12.09	□□□□□ -0.47
SAFB2-206	ENST00000590262	IP6K1	Q92551	441 aa		12.09	□□□□□ -0.47
SAFB2-206	ENST00000590262	C8orf37	Q96NL8	207 aa		12.09	□□□□□ -0.47
SAFB2-206	ENST00000590262	KAT6B	Q8WYB5	2073 aa		12.09	□□□□□ -0.47
SAFB2-206	ENST00000590262	DIAPH1	O60610	1272 aa	Known RBP	12.08	□□□□□ -0.48
SAFB2-206	ENST00000590262	CSB-PGBD3	P0DP91	1061 aa		12.08	□□□□□ -0.48
SAFB2-206	ENST00000590262	WDR43	Q15061	677 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
SAFB2-206	ENST00000590262	U2SURP	O15042	1029 aa	Known RBP	12.07	□□□□□ -0.48
SAFB2-206	ENST00000590262	EVA1C	P58658	441 aa		12.07	□□□□□ -0.48
SAFB2-206	ENST00000590262	CCDC184	Q52MB2	194 aa		12.07	□□□□□ -0.48
SAFB2-206	ENST00000590262	ANKRD24	Q8TF21	1146 aa		12.07	□□□□□ -0.48
SAFB2-206	ENST00000590262	NGLY1	Q96IV0	654 aa		12.07	□□□□□ -0.48
SAFB2-206	ENST00000590262	STRN4	Q9NRL3	753 aa		12.07	□□□□□ -0.48
SAFB2-206	ENST00000590262	BTG4	Q9NY30	223 aa		12.07	□□□□□ -0.48
SAFB2-206	ENST00000590262	NUDC	Q9Y266	331 aa		12.07	□□□□□ -0.48
SAFB2-206	ENST00000590262	SLIT2	O94813	1529 aa		12.06	□□□□□ -0.48
SAFB2-206	ENST00000590262	PKD1L3	Q7Z443	1732 aa		12.06	□□□□□ -0.48
SAFB2-206	ENST00000590262	SHANK3	Q9BYB0	1731 aa		12.06	□□□□□ -0.48
SAFB2-206	ENST00000590262	FAM83G	A6ND36	823 aa		12.06	□□□□□ -0.48
SAFB2-206	ENST00000590262	EIF4A2	Q14240	407 aa	Known RBP	12.06	□□□□□ -0.48
SAFB2-206	ENST00000590262	ERBB3	P21860	1342 aa		12.06	□□□□□ -0.48
SAFB2-206	ENST00000590262	AXIN2	Q9Y2T1	843 aa		12.05	□□□□□ -0.48
SAFB2-206	ENST00000590262	BRWD3	Q6RI45	1802 aa		12.04	□□□□□ -0.48
SAFB2-206	ENST00000590262	FAM9B	Q8IZU0	186 aa		12.04	□□□□□ -0.48
SAFB2-206	ENST00000590262	CRB1	P82279	1406 aa		12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	TOM1L2	Q6ZVM7	507 aa		12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	ILDR1	Q86SU0	546 aa	Predicted RBP	12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	NLRP2	Q9NX02	1062 aa		12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	CCDC9	Q9Y3X0	531 aa	Known RBP	12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	AFF2	P51816	1311 aa		12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	WDR17	Q8IZU2	1322 aa		12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	LRRC37A3	O60309	1634 aa		12.03	□□□□□ -0.48
SAFB2-206	ENST00000590262	IL13	P35225	146 aa		12.02	□□□□□ -0.49
SAFB2-206	ENST00000590262	USHBP1	Q8N6Y0	703 aa		12.02	□□□□□ -0.49
SAFB2-206	ENST00000590262	USP21	Q9UK80	565 aa		12.02	□□□□□ -0.49
SAFB2-206	ENST00000590262	GLI3	P10071	1580 aa		12.01	□□□□□ -0.49
SAFB2-206	ENST00000590262	SCN11A	Q9UI33	1791 aa		12.01	□□□□□ -0.49
SAFB2-206	ENST00000590262	HMOX1	P09601	288 aa		12.01	□□□□□ -0.49
SAFB2-206	ENST00000590262	USP35	Q9P2H5	1018 aa		12.01	□□□□□ -0.49
SAFB2-206	ENST00000590262	IGSF1	Q8N6C5	1336 aa		12.01	□□□□□ -0.49
SAFB2-206	ENST00000590262	NEFM	P07197	916 aa		12	□□□□□ -0.49
SAFB2-206	ENST00000590262	SULT6B1	Q6IMI4	303 aa		12	□□□□□ -0.49
SAFB2-206	ENST00000590262	LARP1	Q6PKG0	1096 aa	Known RBP	12	□□□□□ -0.49
SAFB2-206	ENST00000590262	UNC5CL	Q8IV45	518 aa		12	□□□□□ -0.49
SAFB2-206	ENST00000590262	EYA1	Q99502	592 aa		12	□□□□□ -0.49
SAFB2-206	ENST00000590262	BCL9L	Q86UU0	1499 aa		12	□□□□□ -0.49
SAFB2-206	ENST00000590262	ITGB4	P16144	1822 aa		12	□□□□□ -0.49
SAFB2-206	ENST00000590262	NBPF6	Q5VWK0	638 aa		11.99	□□□□□ -0.49
SAFB2-206	ENST00000590262	PNISR	Q8TF01	805 aa	Known RBP	11.99	□□□□□ -0.49
SAFB2-206	ENST00000590262	NBPF4	Q96M43	638 aa		11.99	□□□□□ -0.49
SAFB2-206	ENST00000590262	PHF23	Q9BUL5	403 aa	Predicted RBP	11.99	□□□□□ -0.49
SAFB2-206	ENST00000590262	MAPK8IP3	Q9UPT6	1336 aa		11.99	□□□□□ -0.49
SAFB2-206	ENST00000590262	DOT1L	Q8TEK3	1739 aa		11.99	□□□□□ -0.49
SAFB2-206	ENST00000590262	THSD7A	Q9UPZ6	1657 aa		11.98	□□□□□ -0.49
SAFB2-206	ENST00000590262	MEGF6	O75095	1541 aa		11.98	□□□□□ -0.49
SAFB2-206	ENST00000590262	NCAPD2	Q15021	1401 aa		11.98	□□□□□ -0.49
SAFB2-206	ENST00000590262	AEBP1	Q8IUX7	1158 aa		11.98	□□□□□ -0.49
SAFB2-206	ENST00000590262	CCDC146	Q8IYE0	955 aa		11.98	□□□□□ -0.49
SAFB2-206	ENST00000590262	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.98	□□□□□ -0.49
SAFB2-206	ENST00000590262	PNN	Q9H307	717 aa	Known RBP	11.98	□□□□□ -0.49
SAFB2-206	ENST00000590262	KDR	P35968	1356 aa		11.97	□□□□□ -0.49
SAFB2-206	ENST00000590262	RAPGEF4	Q8WZA2	1011 aa		11.97	□□□□□ -0.49
SAFB2-206	ENST00000590262	CARD10	Q9BWT7	1032 aa		11.97	□□□□□ -0.49
SAFB2-206	ENST00000590262	ADAMTS8	Q9UP79	889 aa		11.97	□□□□□ -0.49
SAFB2-206	ENST00000590262	SBF2	Q86WG5	1849 aa		11.97	□□□□□ -0.49
SAFB2-206	ENST00000590262	ATRN	O75882	1429 aa		11.96	□□□□□ -0.49
SAFB2-206	ENST00000590262		A0A0G2JS52	829 aa		11.96	□□□□□ -0.49
SAFB2-206	ENST00000590262	PRKAR2B	P31323	418 aa		11.96	□□□□□ -0.49
SAFB2-206	ENST00000590262	MYT1	Q01538	1121 aa		11.96	□□□□□ -0.49
SAFB2-206	ENST00000590262	RSPH6A	Q9H0K4	717 aa		11.96	□□□□□ -0.49
SAFB2-206	ENST00000590262	TRPC5	Q9UL62	973 aa	Predicted RBP	11.96	□□□□□ -0.49
SAFB2-206	ENST00000590262	SIPA1L3	O60292	1781 aa	Predicted RBP	11.95	□□□□□ -0.5
SAFB2-206	ENST00000590262	SPATA31A1	Q5TZJ5	1347 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms