RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
CIRBP-227ENST00000590188 TOM1L2Q6ZVM7 507 aa25.15■■□□□ 1.62
CIRBP-227ENST00000590188 CRB1P82279 1406 aa25.14■■□□□ 1.62
CIRBP-227ENST00000590188 USP54Q70EL1 1684 aa25.13■■□□□ 1.61
CIRBP-227ENST00000590188 RGPD5Q99666 1765 aa25.13■■□□□ 1.61
CIRBP-227ENST00000590188 CSB-PGBD3P0DP91 1061 aa25.13■■□□□ 1.61
CIRBP-227ENST00000590188 HSPA5P11021 654 aaKnown RBP25.13■■□□□ 1.61
CIRBP-227ENST00000590188 BARGINQ6ZT62 677 aa25.13■■□□□ 1.61
CIRBP-227ENST00000590188 OVOS2A0A0J9YW53 1432 aa25.12■■□□□ 1.61
CIRBP-227ENST00000590188 BLMP54132 1417 aaPredicted RBP25.12■■□□□ 1.61
CIRBP-227ENST00000590188 OVOS2Q6IE36 1432 aa25.12■■□□□ 1.61
CIRBP-227ENST00000590188 EIF4G2P78344 907 aaKnown RBP eCLIP25.11■■□□□ 1.61
CIRBP-227ENST00000590188 CCDC125Q86Z20 511 aa25.11■■□□□ 1.61
CIRBP-227ENST00000590188 WDR17Q8IZU2 1322 aa25.11■■□□□ 1.61
CIRBP-227ENST00000590188 SF3B2Q13435 895 aaKnown RBP25.1■■□□□ 1.61
CIRBP-227ENST00000590188 DEFB132Q7Z7B7 95 aa25.09■■□□□ 1.61
CIRBP-227ENST00000590188 COG3Q96JB2 828 aa25.09■■□□□ 1.61
CIRBP-227ENST00000590188 THRAP3Q9Y2W1 955 aaKnown RBP25.09■■□□□ 1.61
CIRBP-227ENST00000590188 MYOM1P52179 1685 aa25.08■■□□□ 1.61
CIRBP-227ENST00000590188 LTN1O94822 1766 aa25.08■■□□□ 1.6
CIRBP-227ENST00000590188 FBLN1P23142 703 aa25.07■■□□□ 1.6
CIRBP-227ENST00000590188 PDE3BQ13370 1112 aa25.07■■□□□ 1.6
CIRBP-227ENST00000590188 GGNBP2Q9H3C7 697 aa25.07■■□□□ 1.6
CIRBP-227ENST00000590188 FYB1O15117 783 aa25.03■■□□□ 1.6
CIRBP-227ENST00000590188 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
CIRBP-227ENST00000590188 ABCC6O95255 1503 aa25.02■■□□□ 1.6
CIRBP-227ENST00000590188 CARD14Q9BXL6 1004 aa25.02■■□□□ 1.6
CIRBP-227ENST00000590188 ANKRD24Q8TF21 1146 aa25.01■■□□□ 1.59
CIRBP-227ENST00000590188 LTV1Q96GA3 475 aaPredicted RBP25.01■■□□□ 1.59
CIRBP-227ENST00000590188 CARD10Q9BWT7 1032 aa25.01■■□□□ 1.59
CIRBP-227ENST00000590188 PARP4Q9UKK3 1724 aaKnown RBP25■■□□□ 1.59
CIRBP-227ENST00000590188 TRIM37O94972 964 aa25■■□□□ 1.59
CIRBP-227ENST00000590188 FAM196AQ6ZSG2 479 aa25■■□□□ 1.59
CIRBP-227ENST00000590188 NLRP2Q9NX02 1062 aa25■■□□□ 1.59
CIRBP-227ENST00000590188 ERBB3P21860 1342 aa25■■□□□ 1.59
CIRBP-227ENST00000590188 LRRC37A3O60309 1634 aa24.99■■□□□ 1.59
CIRBP-227ENST00000590188 DDB1Q16531 1140 aa24.99■■□□□ 1.59
CIRBP-227ENST00000590188 MAP3K19Q56UN5 1328 aa24.99■■□□□ 1.59
CIRBP-227ENST00000590188 KIF20BQ96Q89 1820 aa24.99■■□□□ 1.59
CIRBP-227ENST00000590188 WNK3Q9BYP7 1800 aa24.98■■□□□ 1.59
CIRBP-227ENST00000590188 BAG6P46379 1132 aa24.98■■□□□ 1.59
CIRBP-227ENST00000590188 RRS1Q15050 365 aaKnown RBP24.98■■□□□ 1.59
CIRBP-227ENST00000590188 RGPD1P0DJD0 1748 aa24.98■■□□□ 1.59
CIRBP-227ENST00000590188 AMPHP49418 695 aa24.97■■□□□ 1.59
CIRBP-227ENST00000590188 IP6K1Q92551 441 aa24.97■■□□□ 1.59
CIRBP-227ENST00000590188 EN1Q05925 392 aaPredicted RBP24.96■■□□□ 1.59
CIRBP-227ENST00000590188 CCDC7Q96M83 1385 aa24.95■■□□□ 1.59
CIRBP-227ENST00000590188 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
CIRBP-227ENST00000590188 HOXC9P31274 260 aa24.94■■□□□ 1.58
CIRBP-227ENST00000590188 TNS1Q9HBL0 1735 aaKnown RBP24.94■■□□□ 1.58
CIRBP-227ENST00000590188 DISP2A7MBM2 1401 aa24.94■■□□□ 1.58
CIRBP-227ENST00000590188 CDCA7Q9BWT1 371 aaPredicted RBP24.93■■□□□ 1.58
CIRBP-227ENST00000590188 OVOS2A0A0G2JMS6 1433 aa24.9■■□□□ 1.58
CIRBP-227ENST00000590188 APBA3O96018 575 aa24.9■■□□□ 1.58
CIRBP-227ENST00000590188 MARCH10Q8NA82 808 aaPredicted RBP24.9■■□□□ 1.58
CIRBP-227ENST00000590188 EXOC5O00471 708 aa24.89■■□□□ 1.58
CIRBP-227ENST00000590188 EZH2Q15910 746 aaKnown RBP24.89■■□□□ 1.58
CIRBP-227ENST00000590188 PANK3Q9H999 370 aa24.88■■□□□ 1.57
CIRBP-227ENST00000590188 CGNL1Q0VF96 1302 aa24.87■■□□□ 1.57
CIRBP-227ENST00000590188 PEAK1Q9H792 1746 aa24.87■■□□□ 1.57
CIRBP-227ENST00000590188 IL2RBP14784 551 aa24.87■■□□□ 1.57
CIRBP-227ENST00000590188 RTL1A6NKG5 1358 aa24.86■■□□□ 1.57
CIRBP-227ENST00000590188 TNS2Q63HR2 1409 aa24.86■■□□□ 1.57
CIRBP-227ENST00000590188 EMILIN1Q9Y6C2 1016 aa24.85■■□□□ 1.57
CIRBP-227ENST00000590188 RGPD2P0DJD1 1756 aa24.83■■□□□ 1.57
CIRBP-227ENST00000590188 FAM208AQ9UK61 1670 aaKnown RBP24.83■■□□□ 1.57
CIRBP-227ENST00000590188 PPM1GO15355 546 aaPredicted RBP24.83■■□□□ 1.57
CIRBP-227ENST00000590188 TNNT2P45379 298 aaPredicted RBP24.83■■□□□ 1.57
CIRBP-227ENST00000590188 HSP90AB2PQ58FF8 381 aa24.83■■□□□ 1.57
CIRBP-227ENST00000590188 USHBP1Q8N6Y0 703 aa24.83■■□□□ 1.57
CIRBP-227ENST00000590188 PTF1AQ7RTS3 328 aa24.82■■□□□ 1.56
CIRBP-227ENST00000590188 CAMKK2Q96RR4 588 aa24.82■■□□□ 1.56
CIRBP-227ENST00000590188 KIF7Q2M1P5 1343 aa24.82■■□□□ 1.56
CIRBP-227ENST00000590188 PSDA5PKW4 1024 aaPredicted RBP24.81■■□□□ 1.56
CIRBP-227ENST00000590188 FLT4P35916 1363 aa24.8■■□□□ 1.56
CIRBP-227ENST00000590188 SMG6Q86US8 1419 aaKnown RBP24.8■■□□□ 1.56
CIRBP-227ENST00000590188 NBPF6Q5VWK0 638 aa24.79■■□□□ 1.56
CIRBP-227ENST00000590188 NBPF4Q96M43 638 aa24.79■■□□□ 1.56
CIRBP-227ENST00000590188 SBF2Q86WG5 1849 aa24.79■■□□□ 1.56
CIRBP-227ENST00000590188 ACSBG1Q96GR2 724 aa24.78■■□□□ 1.56
CIRBP-227ENST00000590188 INSRP06213 1382 aa24.78■■□□□ 1.56
CIRBP-227ENST00000590188 DDX54Q8TDD1 881 aaKnown RBP24.76■■□□□ 1.55
CIRBP-227ENST00000590188 ANKRD26Q9UPS8 1709 aa24.75■■□□□ 1.55
CIRBP-227ENST00000590188 BCL11BQ9C0K0 894 aaPredicted RBP24.75■■□□□ 1.55
CIRBP-227ENST00000590188 MEGF6O75095 1541 aa24.75■■□□□ 1.55
CIRBP-227ENST00000590188 KCNQ2O43526 872 aa24.74■■□□□ 1.55
CIRBP-227ENST00000590188 KIF24Q5T7B8 1368 aa24.74■■□□□ 1.55
CIRBP-227ENST00000590188 BCL9O00512 1426 aa24.73■■□□□ 1.55
CIRBP-227ENST00000590188 R3HDM1Q15032 1099 aaKnown RBP24.73■■□□□ 1.55
CIRBP-227ENST00000590188 POLKQ9UBT6 870 aa24.73■■□□□ 1.55
CIRBP-227ENST00000590188 KNSTRNQ9Y448 316 aa24.73■■□□□ 1.55
CIRBP-227ENST00000590188 MAP2P11137 1827 aaKnown RBP24.72■■□□□ 1.55
CIRBP-227ENST00000590188 PARD3Q8TEW0 1356 aa24.72■■□□□ 1.55
CIRBP-227ENST00000590188 RREB1Q92766 1687 aa24.72■■□□□ 1.55
CIRBP-227ENST00000590188 MORC1Q86VD1 984 aa24.7■■□□□ 1.54
CIRBP-227ENST00000590188 RAPGEF4Q8WZA2 1011 aa24.7■■□□□ 1.54
CIRBP-227ENST00000590188 NUP188Q5SRE5 1749 aa24.69■■□□□ 1.54
CIRBP-227ENST00000590188 ZCRB1Q8TBF4 217 aaKnown RBP24.69■■□□□ 1.54
CIRBP-227ENST00000590188 NSD2O96028 1365 aa24.68■■□□□ 1.54
CIRBP-227ENST00000590188 WASHC2AQ641Q2 1341 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms