RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 TRIM37O94972 964 aa14.96□□□□□ -0.01
RETREG3-209ENST00000590035 EZH2Q15910 746 aaKnown RBP14.96□□□□□ -0.01
RETREG3-209ENST00000590035 RGPD3A6NKT7 1758 aaPredicted RBP14.96□□□□□ -0.02
RETREG3-209ENST00000590035 RGPD4Q7Z3J3 1758 aa14.96□□□□□ -0.02
RETREG3-209ENST00000590035 PSDA5PKW4 1024 aaPredicted RBP14.95□□□□□ -0.02
RETREG3-209ENST00000590035 EVA1CP58658 441 aa14.95□□□□□ -0.02
RETREG3-209ENST00000590035 NLRP6P59044 892 aa14.95□□□□□ -0.02
RETREG3-209ENST00000590035 ARHGEF25Q86VW2 580 aa14.95□□□□□ -0.02
RETREG3-209ENST00000590035 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
RETREG3-209ENST00000590035 USP35Q9P2H5 1018 aa14.95□□□□□ -0.02
RETREG3-209ENST00000590035 AXIN2Q9Y2T1 843 aa14.95□□□□□ -0.02
RETREG3-209ENST00000590035 TTC21AQ8NDW8 1320 aa14.94□□□□□ -0.02
RETREG3-209ENST00000590035 SBF2Q86WG5 1849 aa14.94□□□□□ -0.02
RETREG3-209ENST00000590035 BCL9O00512 1426 aa14.94□□□□□ -0.02
RETREG3-209ENST00000590035 USP31Q70CQ4 1352 aa14.93□□□□□ -0.02
RETREG3-209ENST00000590035 RGPD5Q99666 1765 aa14.93□□□□□ -0.02
RETREG3-209ENST00000590035 WDR17Q8IZU2 1322 aa14.92□□□□□ -0.02
RETREG3-209ENST00000590035 PDE3BQ13370 1112 aa14.92□□□□□ -0.02
RETREG3-209ENST00000590035 NEUROD1Q13562 356 aa14.92□□□□□ -0.02
RETREG3-209ENST00000590035 OVOS2A0A0G2JMS6 1433 aa14.92□□□□□ -0.02
RETREG3-209ENST00000590035 OVOS2A0A0J9YW53 1432 aa14.92□□□□□ -0.02
RETREG3-209ENST00000590035 OVOS2Q6IE36 1432 aa14.92□□□□□ -0.02
RETREG3-209ENST00000590035 R3HDM1Q15032 1099 aaKnown RBP14.91□□□□□ -0.02
RETREG3-209ENST00000590035 C11orf95C9JLR9 678 aaPredicted RBP14.9□□□□□ -0.02
RETREG3-209ENST00000590035 APBA3O96018 575 aa14.9□□□□□ -0.02
RETREG3-209ENST00000590035 KCNH5Q8NCM2 988 aa14.9□□□□□ -0.02
RETREG3-209ENST00000590035 KTN1Q86UP2 1357 aaKnown RBP14.89□□□□□ -0.03
RETREG3-209ENST00000590035 CARD10Q9BWT7 1032 aa14.88□□□□□ -0.03
RETREG3-209ENST00000590035 PUS7Q96PZ0 661 aaKnown RBP14.87□□□□□ -0.03
RETREG3-209ENST00000590035 PLSCR1O15162 318 aa14.86□□□□□ -0.03
RETREG3-209ENST00000590035 DDB1Q16531 1140 aa14.86□□□□□ -0.03
RETREG3-209ENST00000590035 MARCH10Q8NA82 808 aaPredicted RBP14.86□□□□□ -0.03
RETREG3-209ENST00000590035 CDCA7Q9BWT1 371 aaPredicted RBP14.86□□□□□ -0.03
RETREG3-209ENST00000590035 EDC4Q6P2E9 1401 aaKnown RBP14.85□□□□□ -0.03
RETREG3-209ENST00000590035 TOM1L2Q6ZVM7 507 aa14.85□□□□□ -0.03
RETREG3-209ENST00000590035 PTF1AQ7RTS3 328 aa14.85□□□□□ -0.03
RETREG3-209ENST00000590035 CARD11Q9BXL7 1154 aa14.85□□□□□ -0.03
RETREG3-209ENST00000590035 LTN1O94822 1766 aa14.84□□□□□ -0.03
RETREG3-209ENST00000590035 TESK2Q96S53 571 aa14.84□□□□□ -0.03
RETREG3-209ENST00000590035 CCDC7Q96M83 1385 aa14.84□□□□□ -0.03
RETREG3-209ENST00000590035 TNS2Q63HR2 1409 aa14.83□□□□□ -0.03
RETREG3-209ENST00000590035 CASZ1Q86V15 1759 aa14.83□□□□□ -0.03
RETREG3-209ENST00000590035 ZBTB7CA1YPR0 619 aa14.83□□□□□ -0.04
RETREG3-209ENST00000590035 BCL11BQ9C0K0 894 aaPredicted RBP14.83□□□□□ -0.04
RETREG3-209ENST00000590035 ERBB3P21860 1342 aa14.83□□□□□ -0.04
RETREG3-209ENST00000590035 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
RETREG3-209ENST00000590035 NME9Q86XW9 330 aa14.82□□□□□ -0.04
RETREG3-209ENST00000590035 PROM2Q8N271 834 aa14.82□□□□□ -0.04
RETREG3-209ENST00000590035 SLC12A5Q9H2X9 1139 aa14.82□□□□□ -0.04
RETREG3-209ENST00000590035 TONSLQ96HA7 1378 aa14.81□□□□□ -0.04
RETREG3-209ENST00000590035 NHSQ6T4R5 1651 aa14.81□□□□□ -0.04
RETREG3-209ENST00000590035 ANO8Q9HCE9 1232 aaPredicted RBP14.8□□□□□ -0.04
RETREG3-209ENST00000590035 NINLQ9Y2I6 1382 aa14.8□□□□□ -0.04
RETREG3-209ENST00000590035 NBPF14Q5TI25 921 aa14.79□□□□□ -0.04
RETREG3-209ENST00000590035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.79□□□□□ -0.04
RETREG3-209ENST00000590035 SOX12O15370 315 aa14.78□□□□□ -0.04
RETREG3-209ENST00000590035 PAPPAQ13219 1627 aa14.77□□□□□ -0.04
RETREG3-209ENST00000590035 HDGFL2Q7Z4V5 671 aaPredicted RBP14.77□□□□□ -0.05
RETREG3-209ENST00000590035 FAM208AQ9UK61 1670 aaKnown RBP14.77□□□□□ -0.05
RETREG3-209ENST00000590035 ST20-MTHFSA0A0A6YYL1 179 aa14.76□□□□□ -0.05
RETREG3-209ENST00000590035 EXOC5O00471 708 aa14.76□□□□□ -0.05
RETREG3-209ENST00000590035 CSB-PGBD3P0DP91 1061 aa14.76□□□□□ -0.05
RETREG3-209ENST00000590035 TERF2IPQ9NYB0 399 aa14.76□□□□□ -0.05
RETREG3-209ENST00000590035 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
RETREG3-209ENST00000590035 KCNQ2O43526 872 aa14.74□□□□□ -0.05
RETREG3-209ENST00000590035 ANKRD24Q8TF21 1146 aa14.74□□□□□ -0.05
RETREG3-209ENST00000590035 TXNRD1Q16881 649 aa14.73□□□□□ -0.05
RETREG3-209ENST00000590035 IP6K1Q92551 441 aa14.73□□□□□ -0.05
RETREG3-209ENST00000590035 SPON1Q9HCB6 807 aa14.73□□□□□ -0.05
RETREG3-209ENST00000590035 BTAF1O14981 1849 aa14.73□□□□□ -0.05
RETREG3-209ENST00000590035 ANKRD36BQ8N2N9 1353 aa14.73□□□□□ -0.05
RETREG3-209ENST00000590035 SHANK3Q9BYB0 1731 aa14.72□□□□□ -0.05
RETREG3-209ENST00000590035 IL2RBP14784 551 aa14.72□□□□□ -0.05
RETREG3-209ENST00000590035 PDGFDQ9GZP0 370 aaPredicted RBP14.72□□□□□ -0.05
RETREG3-209ENST00000590035 NLRP2Q9NX02 1062 aa14.72□□□□□ -0.05
RETREG3-209ENST00000590035 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
RETREG3-209ENST00000590035 UTRNP46939 3433 aa14.71□□□□□ -0.05
RETREG3-209ENST00000590035 MAP3K19Q56UN5 1328 aa14.7□□□□□ -0.06
RETREG3-209ENST00000590035 PTGER2P43116 358 aa14.7□□□□□ -0.06
RETREG3-209ENST00000590035 SGIP1Q9BQI5 828 aa14.69□□□□□ -0.06
RETREG3-209ENST00000590035 RGPD2P0DJD1 1756 aa14.69□□□□□ -0.06
RETREG3-209ENST00000590035 RTL1A6NKG5 1358 aa14.69□□□□□ -0.06
RETREG3-209ENST00000590035 USP47Q96K76 1375 aa14.69□□□□□ -0.06
RETREG3-209ENST00000590035 MYOM1P52179 1685 aa14.68□□□□□ -0.06
RETREG3-209ENST00000590035 DCAF8L1A6NGE4 600 aa14.68□□□□□ -0.06
RETREG3-209ENST00000590035 HOXC9P31274 260 aa14.68□□□□□ -0.06
RETREG3-209ENST00000590035 SLC15A2Q16348 729 aa14.68□□□□□ -0.06
RETREG3-209ENST00000590035 COL24A1Q17RW2 1714 aa14.67□□□□□ -0.06
RETREG3-209ENST00000590035 MEGF6O75095 1541 aa14.66□□□□□ -0.06
RETREG3-209ENST00000590035 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
RETREG3-209ENST00000590035 NSD2O96028 1365 aa14.66□□□□□ -0.06
RETREG3-209ENST00000590035 FYB1O15117 783 aa14.66□□□□□ -0.06
RETREG3-209ENST00000590035 FBLN1P23142 703 aa14.66□□□□□ -0.06
RETREG3-209ENST00000590035 TRIM26Q12899 539 aaPredicted RBP14.66□□□□□ -0.06
RETREG3-209ENST00000590035 ACSBG1Q96GR2 724 aa14.66□□□□□ -0.06
RETREG3-209ENST00000590035 COG3Q96JB2 828 aa14.66□□□□□ -0.06
RETREG3-209ENST00000590035 LRRC4BQ9NT99 713 aa14.65□□□□□ -0.06
RETREG3-209ENST00000590035 STK32BQ9NY57 414 aa14.65□□□□□ -0.06
RETREG3-209ENST00000590035 LY75O60449 1722 aa14.65□□□□□ -0.06
RETREG3-209ENST00000590035 KIF20BQ96Q89 1820 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms