RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 KCNH5Q8NCM2 988 aa25.59■■□□□ 1.69
H3F3B-209ENST00000589949 RGPD5Q99666 1765 aa25.59■■□□□ 1.69
H3F3B-209ENST00000589949 TOM1L2Q6ZVM7 507 aa25.58■■□□□ 1.69
H3F3B-209ENST00000589949 NME9Q86XW9 330 aa25.58■■□□□ 1.69
H3F3B-209ENST00000589949 WDR17Q8IZU2 1322 aa25.58■■□□□ 1.69
H3F3B-209ENST00000589949 TESK2Q96S53 571 aa25.57■■□□□ 1.68
H3F3B-209ENST00000589949 LRRC37A3O60309 1634 aa25.56■■□□□ 1.68
H3F3B-209ENST00000589949 R3HDM1Q15032 1099 aaKnown RBP25.56■■□□□ 1.68
H3F3B-209ENST00000589949 TMC1Q8TDI8 760 aa25.56■■□□□ 1.68
H3F3B-209ENST00000589949 PEAK1Q9H792 1746 aa25.56■■□□□ 1.68
H3F3B-209ENST00000589949 USP31Q70CQ4 1352 aa25.56■■□□□ 1.68
H3F3B-209ENST00000589949 LRP5O75197 1615 aa25.53■■□□□ 1.68
H3F3B-209ENST00000589949 ST20-MTHFSA0A0A6YYL1 179 aa25.53■■□□□ 1.68
H3F3B-209ENST00000589949 PTF1AQ7RTS3 328 aa25.52■■□□□ 1.68
H3F3B-209ENST00000589949 A0A1W2PP64 1363 aa25.52■■□□□ 1.68
H3F3B-209ENST00000589949 USP54Q70EL1 1684 aa25.52■■□□□ 1.68
H3F3B-209ENST00000589949 DDB1Q16531 1140 aa25.51■■□□□ 1.67
H3F3B-209ENST00000589949 WNK3Q9BYP7 1800 aa25.51■■□□□ 1.67
H3F3B-209ENST00000589949 CARD10Q9BWT7 1032 aa25.5■■□□□ 1.67
H3F3B-209ENST00000589949 RREB1Q92766 1687 aa25.49■■□□□ 1.67
H3F3B-209ENST00000589949 EDC4Q6P2E9 1401 aaKnown RBP25.49■■□□□ 1.67
H3F3B-209ENST00000589949 PARD3Q8TEW0 1356 aa25.49■■□□□ 1.67
H3F3B-209ENST00000589949 HDGFL2Q7Z4V5 671 aaPredicted RBP25.49■■□□□ 1.67
H3F3B-209ENST00000589949 MARCH10Q8NA82 808 aaPredicted RBP25.49■■□□□ 1.67
H3F3B-209ENST00000589949 PUS7Q96PZ0 661 aaKnown RBP25.49■■□□□ 1.67
H3F3B-209ENST00000589949 OVOS2A0A0G2JMS6 1433 aa25.48■■□□□ 1.67
H3F3B-209ENST00000589949 OVOS2A0A0J9YW53 1432 aa25.48■■□□□ 1.67
H3F3B-209ENST00000589949 OVOS2Q6IE36 1432 aa25.48■■□□□ 1.67
H3F3B-209ENST00000589949 CSB-PGBD3P0DP91 1061 aa25.48■■□□□ 1.67
H3F3B-209ENST00000589949 NUP188Q5SRE5 1749 aa25.47■■□□□ 1.67
H3F3B-209ENST00000589949 ABCC6O95255 1503 aa25.46■■□□□ 1.67
H3F3B-209ENST00000589949 SBF2Q86WG5 1849 aa25.46■■□□□ 1.67
H3F3B-209ENST00000589949 TERF2IPQ9NYB0 399 aa25.45■■□□□ 1.66
H3F3B-209ENST00000589949 CDCA7Q9BWT1 371 aaPredicted RBP25.43■■□□□ 1.66
H3F3B-209ENST00000589949 ERBB3P21860 1342 aa25.42■■□□□ 1.66
H3F3B-209ENST00000589949 LTN1O94822 1766 aa25.42■■□□□ 1.66
H3F3B-209ENST00000589949 C11orf95C9JLR9 678 aaPredicted RBP25.41■■□□□ 1.66
H3F3B-209ENST00000589949 CCDC7Q96M83 1385 aa25.4■■□□□ 1.66
H3F3B-209ENST00000589949 BCL9O00512 1426 aa25.39■■□□□ 1.66
H3F3B-209ENST00000589949 BCL11BQ9C0K0 894 aaPredicted RBP25.39■■□□□ 1.66
H3F3B-209ENST00000589949 FBLN1P23142 703 aa25.38■■□□□ 1.65
H3F3B-209ENST00000589949 NLRP2Q9NX02 1062 aa25.38■■□□□ 1.65
H3F3B-209ENST00000589949 USP47Q96K76 1375 aa25.37■■□□□ 1.65
H3F3B-209ENST00000589949 EXOC5O00471 708 aa25.37■■□□□ 1.65
H3F3B-209ENST00000589949 PLSCR1O15162 318 aa25.37■■□□□ 1.65
H3F3B-209ENST00000589949 PROM2Q8N271 834 aa25.37■■□□□ 1.65
H3F3B-209ENST00000589949 ANKRD24Q8TF21 1146 aa25.37■■□□□ 1.65
H3F3B-209ENST00000589949 NINLQ9Y2I6 1382 aa25.36■■□□□ 1.65
H3F3B-209ENST00000589949 TNS2Q63HR2 1409 aa25.36■■□□□ 1.65
H3F3B-209ENST00000589949 RGPD3A6NKT7 1758 aaPredicted RBP25.33■■□□□ 1.65
H3F3B-209ENST00000589949 RGPD4Q7Z3J3 1758 aa25.33■■□□□ 1.65
H3F3B-209ENST00000589949 KCNQ2O43526 872 aa25.33■■□□□ 1.65
H3F3B-209ENST00000589949 NBPF14Q5TI25 921 aa25.33■■□□□ 1.65
H3F3B-209ENST00000589949 ANO8Q9HCE9 1232 aaPredicted RBP25.33■■□□□ 1.65
H3F3B-209ENST00000589949 IP6K1Q92551 441 aa25.32■■□□□ 1.64
H3F3B-209ENST00000589949 ANKRD36BQ8N2N9 1353 aa25.31■■□□□ 1.64
H3F3B-209ENST00000589949 IL2RBP14784 551 aa25.31■■□□□ 1.64
H3F3B-209ENST00000589949 MAP3K19Q56UN5 1328 aa25.31■■□□□ 1.64
H3F3B-209ENST00000589949 SLC24A1O60721 1099 aa25.29■■□□□ 1.64
H3F3B-209ENST00000589949 TMF1P82094 1093 aa25.29■■□□□ 1.64
H3F3B-209ENST00000589949 LTV1Q96GA3 475 aaPredicted RBP25.29■■□□□ 1.64
H3F3B-209ENST00000589949 COG3Q96JB2 828 aa25.29■■□□□ 1.64
H3F3B-209ENST00000589949 FYB1O15117 783 aa25.27■■□□□ 1.64
H3F3B-209ENST00000589949 ACSBG1Q96GR2 724 aa25.27■■□□□ 1.64
H3F3B-209ENST00000589949 PDGFDQ9GZP0 370 aaPredicted RBP25.27■■□□□ 1.64
H3F3B-209ENST00000589949 HOXC9P31274 260 aa25.26■■□□□ 1.63
H3F3B-209ENST00000589949 GGNBP2Q9H3C7 697 aa25.26■■□□□ 1.63
H3F3B-209ENST00000589949 TXNRD1Q16881 649 aa25.25■■□□□ 1.63
H3F3B-209ENST00000589949 NHSQ6T4R5 1651 aa25.24■■□□□ 1.63
H3F3B-209ENST00000589949 PCGF6Q9BYE7 350 aa25.24■■□□□ 1.63
H3F3B-209ENST00000589949 RRS1Q15050 365 aaKnown RBP25.23■■□□□ 1.63
H3F3B-209ENST00000589949 FAM208AQ9UK61 1670 aaKnown RBP25.21■■□□□ 1.63
H3F3B-209ENST00000589949 AMPHP49418 695 aa25.21■■□□□ 1.63
H3F3B-209ENST00000589949 CARD14Q9BXL6 1004 aa25.21■■□□□ 1.63
H3F3B-209ENST00000589949 RGPD2P0DJD1 1756 aa25.21■■□□□ 1.63
H3F3B-209ENST00000589949 CASZ1Q86V15 1759 aa25.2■■□□□ 1.62
H3F3B-209ENST00000589949 TIMELESSQ9UNS1 1208 aa25.19■■□□□ 1.62
H3F3B-209ENST00000589949 MYOM1P52179 1685 aa25.19■■□□□ 1.62
H3F3B-209ENST00000589949 SPON1Q9HCB6 807 aa25.18■■□□□ 1.62
H3F3B-209ENST00000589949 DDX54Q8TDD1 881 aaKnown RBP25.17■■□□□ 1.62
H3F3B-209ENST00000589949 NBPF6Q5VWK0 638 aa25.16■■□□□ 1.62
H3F3B-209ENST00000589949 NBPF4Q96M43 638 aa25.16■■□□□ 1.62
H3F3B-209ENST00000589949 BTAF1O14981 1849 aa25.16■■□□□ 1.62
H3F3B-209ENST00000589949 MEGF6O75095 1541 aa25.16■■□□□ 1.62
H3F3B-209ENST00000589949 CLSPNQ9HAW4 1339 aa25.15■■□□□ 1.62
H3F3B-209ENST00000589949 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
H3F3B-209ENST00000589949 RTL1A6NKG5 1358 aa25.15■■□□□ 1.62
H3F3B-209ENST00000589949 SHANK3Q9BYB0 1731 aa25.13■■□□□ 1.61
H3F3B-209ENST00000589949 SLC15A2Q16348 729 aa25.13■■□□□ 1.61
H3F3B-209ENST00000589949 USHBP1Q8N6Y0 703 aa25.13■■□□□ 1.61
H3F3B-209ENST00000589949 KIF20BQ96Q89 1820 aa25.13■■□□□ 1.61
H3F3B-209ENST00000589949 ZBTB7AO95365 584 aa25.12■■□□□ 1.61
H3F3B-209ENST00000589949 HSP90AB2PQ58FF8 381 aa25.12■■□□□ 1.61
H3F3B-209ENST00000589949 LRRC4BQ9NT99 713 aa25.12■■□□□ 1.61
H3F3B-209ENST00000589949 PAPPAQ13219 1627 aa25.12■■□□□ 1.61
H3F3B-209ENST00000589949 STK32BQ9NY57 414 aa25.11■■□□□ 1.61
H3F3B-209ENST00000589949 NSD3Q9BZ95 1437 aa25.11■■□□□ 1.61
H3F3B-209ENST00000589949 PTGER2P43116 358 aa25.09■■□□□ 1.61
H3F3B-209ENST00000589949 ZCRB1Q8TBF4 217 aaKnown RBP25.09■■□□□ 1.61
H3F3B-209ENST00000589949 KAT6BQ8WYB5 2073 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms