RNA–Protein interactions for RNA: ENST00000589925.1

SAFB2-204, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-204ENST00000589925 CRB1P82279 1406 aa23.33■■□□□ 1.33
SAFB2-204ENST00000589925 BRWD3Q6RI45 1802 aa23.33■■□□□ 1.33
SAFB2-204ENST00000589925 A0A0G2JS52 829 aa23.33■■□□□ 1.33
SAFB2-204ENST00000589925 MYT1Q01538 1121 aa23.33■■□□□ 1.33
SAFB2-204ENST00000589925 CARD14Q9BXL6 1004 aa23.33■■□□□ 1.33
SAFB2-204ENST00000589925 USP35Q9P2H5 1018 aa23.33■■□□□ 1.33
SAFB2-204ENST00000589925 FYB1O15117 783 aa23.32■■□□□ 1.32
SAFB2-204ENST00000589925 BARGINQ6ZT62 677 aa23.32■■□□□ 1.32
SAFB2-204ENST00000589925 KRT27Q7Z3Y8 459 aa23.32■■□□□ 1.32
SAFB2-204ENST00000589925 COG3Q96JB2 828 aa23.32■■□□□ 1.32
SAFB2-204ENST00000589925 WDR17Q8IZU2 1322 aa23.31■■□□□ 1.32
SAFB2-204ENST00000589925 TCP11L2Q8N4U5 519 aa23.3■■□□□ 1.32
SAFB2-204ENST00000589925 THRAP3Q9Y2W1 955 aaKnown RBP23.3■■□□□ 1.32
SAFB2-204ENST00000589925 NSD3Q9BZ95 1437 aa23.3■■□□□ 1.32
SAFB2-204ENST00000589925 C11orf95C9JLR9 678 aaPredicted RBP23.29■■□□□ 1.32
SAFB2-204ENST00000589925 POLR3GLQ9BT43 218 aa23.28■■□□□ 1.32
SAFB2-204ENST00000589925 GGNBP2Q9H3C7 697 aa23.28■■□□□ 1.32
SAFB2-204ENST00000589925 TOM1L2Q6ZVM7 507 aa23.27■■□□□ 1.32
SAFB2-204ENST00000589925 LTN1O94822 1766 aa23.27■■□□□ 1.32
SAFB2-204ENST00000589925 ERBB3P21860 1342 aa23.25■■□□□ 1.31
SAFB2-204ENST00000589925 RGPD5Q99666 1765 aa23.24■■□□□ 1.31
SAFB2-204ENST00000589925 FBLN1P23142 703 aa23.23■■□□□ 1.31
SAFB2-204ENST00000589925 CCDC125Q86Z20 511 aa23.23■■□□□ 1.31
SAFB2-204ENST00000589925 KIF20BQ96Q89 1820 aa23.23■■□□□ 1.31
SAFB2-204ENST00000589925 MAP3K19Q56UN5 1328 aa23.23■■□□□ 1.31
SAFB2-204ENST00000589925 BLMP54132 1417 aaPredicted RBP23.23■■□□□ 1.31
SAFB2-204ENST00000589925 CSB-PGBD3P0DP91 1061 aa23.22■■□□□ 1.31
SAFB2-204ENST00000589925 IP6K1Q92551 441 aa23.22■■□□□ 1.31
SAFB2-204ENST00000589925 CARD10Q9BWT7 1032 aa23.22■■□□□ 1.31
SAFB2-204ENST00000589925 FAM182BQ5T319 152 aa23.21■■□□□ 1.31
SAFB2-204ENST00000589925 PARP4Q9UKK3 1724 aaKnown RBP23.2■■□□□ 1.3
SAFB2-204ENST00000589925 CGNL1Q0VF96 1302 aa23.2■■□□□ 1.3
SAFB2-204ENST00000589925 KIF7Q2M1P5 1343 aa23.2■■□□□ 1.3
SAFB2-204ENST00000589925 ANKRD24Q8TF21 1146 aa23.19■■□□□ 1.3
SAFB2-204ENST00000589925 PANK3Q9H999 370 aa23.19■■□□□ 1.3
SAFB2-204ENST00000589925 RTL1A6NKG5 1358 aa23.18■■□□□ 1.3
SAFB2-204ENST00000589925 HOXC9P31274 260 aa23.18■■□□□ 1.3
SAFB2-204ENST00000589925 DISP2A7MBM2 1401 aa23.17■■□□□ 1.3
SAFB2-204ENST00000589925 CCDC7Q96M83 1385 aa23.17■■□□□ 1.3
SAFB2-204ENST00000589925 RRS1Q15050 365 aaKnown RBP23.17■■□□□ 1.3
SAFB2-204ENST00000589925 LRRC37A3O60309 1634 aa23.16■■□□□ 1.3
SAFB2-204ENST00000589925 PDE3BQ13370 1112 aa23.16■■□□□ 1.3
SAFB2-204ENST00000589925 WNK3Q9BYP7 1800 aa23.15■■□□□ 1.3
SAFB2-204ENST00000589925 AMPHP49418 695 aa23.15■■□□□ 1.3
SAFB2-204ENST00000589925 CDCA7Q9BWT1 371 aaPredicted RBP23.15■■□□□ 1.3
SAFB2-204ENST00000589925 NLRP2Q9NX02 1062 aa23.14■■□□□ 1.29
SAFB2-204ENST00000589925 FAM196AQ6ZSG2 479 aa23.13■■□□□ 1.29
SAFB2-204ENST00000589925 DDB1Q16531 1140 aa23.12■■□□□ 1.29
SAFB2-204ENST00000589925 KIF24Q5T7B8 1368 aa23.12■■□□□ 1.29
SAFB2-204ENST00000589925 PEAK1Q9H792 1746 aa23.11■■□□□ 1.29
SAFB2-204ENST00000589925 FAM208AQ9UK61 1670 aaKnown RBP23.1■■□□□ 1.29
SAFB2-204ENST00000589925 SF3B2Q13435 895 aaKnown RBP23.1■■□□□ 1.29
SAFB2-204ENST00000589925 LTV1Q96GA3 475 aaPredicted RBP23.1■■□□□ 1.29
SAFB2-204ENST00000589925 FLT4P35916 1363 aa23.1■■□□□ 1.29
SAFB2-204ENST00000589925 NSD2O96028 1365 aa23.09■■□□□ 1.29
SAFB2-204ENST00000589925 WASHC2AQ641Q2 1341 aa23.08■■□□□ 1.29
SAFB2-204ENST00000589925 HSP90AB2PQ58FF8 381 aa23.08■■□□□ 1.29
SAFB2-204ENST00000589925 DEFB132Q7Z7B7 95 aa23.08■■□□□ 1.29
SAFB2-204ENST00000589925 EMILIN1Q9Y6C2 1016 aa23.08■■□□□ 1.29
SAFB2-204ENST00000589925 INSRP06213 1382 aa23.08■■□□□ 1.29
SAFB2-204ENST00000589925 ANKRD26Q9UPS8 1709 aa23.08■■□□□ 1.28
SAFB2-204ENST00000589925 OVOS2A0A0G2JMS6 1433 aa23.08■■□□□ 1.28
SAFB2-204ENST00000589925 RGPD1P0DJD0 1748 aa23.07■■□□□ 1.28
SAFB2-204ENST00000589925 TNS2Q63HR2 1409 aa23.07■■□□□ 1.28
SAFB2-204ENST00000589925 IL2RBP14784 551 aa23.06■■□□□ 1.28
SAFB2-204ENST00000589925 TNS1Q9HBL0 1735 aaKnown RBP23.05■■□□□ 1.28
SAFB2-204ENST00000589925 EXOC5O00471 708 aa23.05■■□□□ 1.28
SAFB2-204ENST00000589925 TRIM37O94972 964 aa23.05■■□□□ 1.28
SAFB2-204ENST00000589925 MARCH10Q8NA82 808 aaPredicted RBP23.05■■□□□ 1.28
SAFB2-204ENST00000589925 KNSTRNQ9Y448 316 aa23.05■■□□□ 1.28
SAFB2-204ENST00000589925 SMG6Q86US8 1419 aaKnown RBP23.05■■□□□ 1.28
SAFB2-204ENST00000589925 BCL9O00512 1426 aa23.04■■□□□ 1.28
SAFB2-204ENST00000589925 BAG6P46379 1132 aa23.03■■□□□ 1.28
SAFB2-204ENST00000589925 POLKQ9UBT6 870 aa23.03■■□□□ 1.28
SAFB2-204ENST00000589925 PER1O15534 1290 aaPredicted RBP23.02■■□□□ 1.28
SAFB2-204ENST00000589925 TNNT2P45379 298 aaPredicted RBP23.02■■□□□ 1.28
SAFB2-204ENST00000589925 AMER1Q5JTC6 1135 aaPredicted RBP23.02■■□□□ 1.28
SAFB2-204ENST00000589925 NBPF6Q5VWK0 638 aa23.02■■□□□ 1.28
SAFB2-204ENST00000589925 NBPF4Q96M43 638 aa23.02■■□□□ 1.28
SAFB2-204ENST00000589925 SRCAPQ6ZRS2 3230 aa23.01■■□□□ 1.27
SAFB2-204ENST00000589925 PPM1GO15355 546 aaPredicted RBP23.01■■□□□ 1.27
SAFB2-204ENST00000589925 RGPD2P0DJD1 1756 aa22.99■■□□□ 1.27
SAFB2-204ENST00000589925 MEGF6O75095 1541 aa22.98■■□□□ 1.27
SAFB2-204ENST00000589925 EN1Q05925 392 aaPredicted RBP22.98■■□□□ 1.27
SAFB2-204ENST00000589925 MORC1Q86VD1 984 aa22.98■■□□□ 1.27
SAFB2-204ENST00000589925 USHBP1Q8N6Y0 703 aa22.97■■□□□ 1.27
SAFB2-204ENST00000589925 APBA3O96018 575 aa22.96■■□□□ 1.27
SAFB2-204ENST00000589925 MAP2P11137 1827 aaKnown RBP22.96■■□□□ 1.27
SAFB2-204ENST00000589925 NCAPD2Q15021 1401 aa22.95■■□□□ 1.26
SAFB2-204ENST00000589925 CAMKK2Q96RR4 588 aa22.95■■□□□ 1.26
SAFB2-204ENST00000589925 PARD3Q8TEW0 1356 aa22.93■■□□□ 1.26
SAFB2-204ENST00000589925 EZH2Q15910 746 aaKnown RBP22.93■■□□□ 1.26
SAFB2-204ENST00000589925 PTF1AQ7RTS3 328 aa22.93■■□□□ 1.26
SAFB2-204ENST00000589925 BCL11BQ9C0K0 894 aaPredicted RBP22.93■■□□□ 1.26
SAFB2-204ENST00000589925 SBF2Q86WG5 1849 aa22.92■■□□□ 1.26
SAFB2-204ENST00000589925 NPC1L1Q9UHC9 1359 aa22.91■■□□□ 1.26
SAFB2-204ENST00000589925 EIF4A2Q14240 407 aaKnown RBP22.91■■□□□ 1.26
SAFB2-204ENST00000589925 RAPGEF4Q8WZA2 1011 aa22.91■■□□□ 1.26
SAFB2-204ENST00000589925 ZCRB1Q8TBF4 217 aaKnown RBP22.9■■□□□ 1.26
SAFB2-204ENST00000589925 SHANK3Q9BYB0 1731 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms