RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 MYOM1P52179 1685 aa21.97■■□□□ 1.11
SF3A2-204ENST00000589118 SOX12O15370 315 aa21.96■■□□□ 1.11
SF3A2-204ENST00000589118 NINLQ9Y2I6 1382 aa21.96■■□□□ 1.11
SF3A2-204ENST00000589118 QRICH2Q9H0J4 1663 aa21.95■■□□□ 1.1
SF3A2-204ENST00000589118 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
SF3A2-204ENST00000589118 PIK3C2AO00443 1686 aa21.95■■□□□ 1.1
SF3A2-204ENST00000589118 RGPD3A6NKT7 1758 aaPredicted RBP21.94■■□□□ 1.1
SF3A2-204ENST00000589118 AKAP12Q02952 1782 aa21.94■■□□□ 1.1
SF3A2-204ENST00000589118 RGPD4Q7Z3J3 1758 aa21.94■■□□□ 1.1
SF3A2-204ENST00000589118 CENPJQ9HC77 1338 aaPredicted RBP21.94■■□□□ 1.1
SF3A2-204ENST00000589118 AATKQ6ZMQ8 1374 aa21.94■■□□□ 1.1
SF3A2-204ENST00000589118 USP6P35125 1406 aa21.94■■□□□ 1.1
SF3A2-204ENST00000589118 SLIT3O75094 1523 aa21.94■■□□□ 1.1
SF3A2-204ENST00000589118 PTGER2P43116 358 aa21.92■■□□□ 1.1
SF3A2-204ENST00000589118 WDR17Q8IZU2 1322 aa21.9■■□□□ 1.1
SF3A2-204ENST00000589118 TXNRD1Q16881 649 aa21.89■■□□□ 1.09
SF3A2-204ENST00000589118 C11orf95C9JLR9 678 aaPredicted RBP21.88■■□□□ 1.09
SF3A2-204ENST00000589118 CSB-PGBD3P0DP91 1061 aa21.87■■□□□ 1.09
SF3A2-204ENST00000589118 ARHGEF25Q86VW2 580 aa21.86■■□□□ 1.09
SF3A2-204ENST00000589118 ZNF784Q8NCA9 323 aaPredicted RBP21.86■■□□□ 1.09
SF3A2-204ENST00000589118 FHDC1Q9C0D6 1143 aaPredicted RBP21.86■■□□□ 1.09
SF3A2-204ENST00000589118 STK32BQ9NY57 414 aa21.86■■□□□ 1.09
SF3A2-204ENST00000589118 CPSF1Q10570 1443 aaKnown RBP21.86■■□□□ 1.09
SF3A2-204ENST00000589118 SLC15A2Q16348 729 aa21.85■■□□□ 1.09
SF3A2-204ENST00000589118 ACSBG1Q96GR2 724 aa21.85■■□□□ 1.09
SF3A2-204ENST00000589118 SYT17Q9BSW7 474 aa21.85■■□□□ 1.09
SF3A2-204ENST00000589118 BRD4O60885 1362 aaPredicted RBP21.84■■□□□ 1.09
SF3A2-204ENST00000589118 TTC21BQ7Z4L5 1316 aa21.83■■□□□ 1.09
SF3A2-204ENST00000589118 EXOC5O00471 708 aa21.83■■□□□ 1.09
SF3A2-204ENST00000589118 CARD10Q9BWT7 1032 aa21.83■■□□□ 1.09
SF3A2-204ENST00000589118 UTRNP46939 3433 aa21.8■■□□□ 1.08
SF3A2-204ENST00000589118 SGIP1Q9BQI5 828 aa21.79■■□□□ 1.08
SF3A2-204ENST00000589118 CDCA7Q9BWT1 371 aaPredicted RBP21.79■■□□□ 1.08
SF3A2-204ENST00000589118 KAT6BQ8WYB5 2073 aa21.79■■□□□ 1.08
SF3A2-204ENST00000589118 BCL9O00512 1426 aa21.79■■□□□ 1.08
SF3A2-204ENST00000589118 EVC2Q86UK5 1308 aa21.78■■□□□ 1.08
SF3A2-204ENST00000589118 NFAT5O94916 1531 aa21.77■■□□□ 1.08
SF3A2-204ENST00000589118 CHD4Q14839 1912 aa21.77■■□□□ 1.08
SF3A2-204ENST00000589118 KCNH5Q8NCM2 988 aa21.77■■□□□ 1.08
SF3A2-204ENST00000589118 L3MBTL2Q969R5 705 aa21.77■■□□□ 1.08
SF3A2-204ENST00000589118 MTFR1LQ9H019 292 aa21.77■■□□□ 1.08
SF3A2-204ENST00000589118 NHSQ6T4R5 1651 aa21.76■■□□□ 1.07
SF3A2-204ENST00000589118 TRPM1Q7Z4N2 1603 aa21.76■■□□□ 1.07
SF3A2-204ENST00000589118 BTAF1O14981 1849 aa21.75■■□□□ 1.07
SF3A2-204ENST00000589118 ZNF827Q17R98 1081 aa21.74■■□□□ 1.07
SF3A2-204ENST00000589118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.74■■□□□ 1.07
SF3A2-204ENST00000589118 TNS2Q63HR2 1409 aa21.73■■□□□ 1.07
SF3A2-204ENST00000589118 ARXQ96QS3 562 aa21.73■■□□□ 1.07
SF3A2-204ENST00000589118 SIN3AQ96ST3 1273 aa21.73■■□□□ 1.07
SF3A2-204ENST00000589118 ZNF692Q9BU19 519 aaPredicted RBP21.73■■□□□ 1.07
SF3A2-204ENST00000589118 NLRP2Q9NX02 1062 aa21.73■■□□□ 1.07
SF3A2-204ENST00000589118 KTN1Q86UP2 1357 aaKnown RBP21.73■■□□□ 1.07
SF3A2-204ENST00000589118 SENP3-EIF4A1A0A087X0R7 540 aa21.72■■□□□ 1.07
SF3A2-204ENST00000589118 LRRC4BQ9NT99 713 aa21.72■■□□□ 1.07
SF3A2-204ENST00000589118 PAPPAQ13219 1627 aa21.72■■□□□ 1.07
SF3A2-204ENST00000589118 CCDC7Q96M83 1385 aa21.72■■□□□ 1.07
SF3A2-204ENST00000589118 LTN1O94822 1766 aa21.71■■□□□ 1.07
SF3A2-204ENST00000589118 KCNQ4P56696 695 aa21.7■■□□□ 1.06
SF3A2-204ENST00000589118 NME9Q86XW9 330 aa21.7■■□□□ 1.06
SF3A2-204ENST00000589118 KLHL34Q8N239 644 aa21.7■■□□□ 1.06
SF3A2-204ENST00000589118 TTC21AQ8NDW8 1320 aa21.7■■□□□ 1.06
SF3A2-204ENST00000589118 MON2Q7Z3U7 1717 aa21.69■■□□□ 1.06
SF3A2-204ENST00000589118 C1QTNF8P60827 252 aa21.67■■□□□ 1.06
SF3A2-204ENST00000589118 ABCC6O95255 1503 aa21.66■■□□□ 1.06
SF3A2-204ENST00000589118 ERBB3P21860 1342 aa21.66■■□□□ 1.06
SF3A2-204ENST00000589118 IL2RBP14784 551 aa21.66■■□□□ 1.06
SF3A2-204ENST00000589118 NEUROD1Q13562 356 aa21.66■■□□□ 1.06
SF3A2-204ENST00000589118 GPR162Q16538 588 aa21.66■■□□□ 1.06
SF3A2-204ENST00000589118 ANKRD24Q8TF21 1146 aa21.66■■□□□ 1.06
SF3A2-204ENST00000589118 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
SF3A2-204ENST00000589118 ROCK2O75116 1388 aaKnown RBP21.64■■□□□ 1.06
SF3A2-204ENST00000589118 TUBGCP6Q96RT7 1819 aa21.64■■□□□ 1.05
SF3A2-204ENST00000589118 DDX54Q8TDD1 881 aaKnown RBP21.63■■□□□ 1.05
SF3A2-204ENST00000589118 AKT1S1Q96B36 256 aa21.62■■□□□ 1.05
SF3A2-204ENST00000589118 LTV1Q96GA3 475 aaPredicted RBP21.62■■□□□ 1.05
SF3A2-204ENST00000589118 CD163L1Q9NR16 1453 aa21.62■■□□□ 1.05
SF3A2-204ENST00000589118 NLGN2Q8NFZ4 835 aa21.61■■□□□ 1.05
SF3A2-204ENST00000589118 TMC1Q8TDI8 760 aa21.61■■□□□ 1.05
SF3A2-204ENST00000589118 USP31Q70CQ4 1352 aa21.61■■□□□ 1.05
SF3A2-204ENST00000589118 SBNO2Q9Y2G9 1366 aa21.61■■□□□ 1.05
SF3A2-204ENST00000589118 SLC12A5Q9H2X9 1139 aa21.6■■□□□ 1.05
SF3A2-204ENST00000589118 USP54Q70EL1 1684 aa21.6■■□□□ 1.05
SF3A2-204ENST00000589118 PNPLA7Q6ZV29 1317 aa21.59■■□□□ 1.05
SF3A2-204ENST00000589118 FBLN1P23142 703 aa21.59■■□□□ 1.05
SF3A2-204ENST00000589118 RGPD2P0DJD1 1756 aa21.58■■□□□ 1.04
SF3A2-204ENST00000589118 MAP3K5Q99683 1374 aa21.58■■□□□ 1.04
SF3A2-204ENST00000589118 SYTL4Q96C24 671 aaPredicted RBP21.57■■□□□ 1.04
SF3A2-204ENST00000589118 COL24A1Q17RW2 1714 aa21.56■■□□□ 1.04
SF3A2-204ENST00000589118 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
SF3A2-204ENST00000589118 QSER1Q2KHR3 1735 aa21.55■■□□□ 1.04
SF3A2-204ENST00000589118 TFCP2L1Q9NZI6 479 aa21.55■■□□□ 1.04
SF3A2-204ENST00000589118 DOT1LQ8TEK3 1739 aa21.55■■□□□ 1.04
SF3A2-204ENST00000589118 POLD1P28340 1107 aa21.53■■□□□ 1.04
SF3A2-204ENST00000589118 SHANK3Q9BYB0 1731 aa21.52■■□□□ 1.04
SF3A2-204ENST00000589118 GIGYF1O75420 1035 aaPredicted RBP21.52■■□□□ 1.04
SF3A2-204ENST00000589118 YBX3P16989 372 aaKnown RBP eCLIP21.52■■□□□ 1.041e-9■■□□□ 13.3
SF3A2-204ENST00000589118 HDGFL2Q7Z4V5 671 aaPredicted RBP21.51■■□□□ 1.03
SF3A2-204ENST00000589118 SLC16A10Q8TF71 515 aa21.51■■□□□ 1.03
SF3A2-204ENST00000589118 IP6K1Q92551 441 aa21.51■■□□□ 1.03
SF3A2-204ENST00000589118 LY75O60449 1722 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms