RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 MON2Q7Z3U7 1717 aa28.97■■■□□ 2.23
MBD3-205ENST00000589064 CRB1P82279 1406 aa28.95■■■□□ 2.22
MBD3-205ENST00000589064 DEFB132Q7Z7B7 95 aa28.95■■■□□ 2.22
MBD3-205ENST00000589064 EP400Q96L91 3159 aa28.94■■■□□ 2.22
MBD3-205ENST00000589064 PDE3BQ13370 1112 aa28.94■■■□□ 2.22
MBD3-205ENST00000589064 CSB-PGBD3P0DP91 1061 aa28.93■■■□□ 2.22
MBD3-205ENST00000589064 WDR17Q8IZU2 1322 aa28.93■■■□□ 2.22
MBD3-205ENST00000589064 ANKRD36BQ8N2N9 1353 aa28.93■■■□□ 2.22
MBD3-205ENST00000589064 THSD7AQ9UPZ6 1657 aa28.92■■■□□ 2.22
MBD3-205ENST00000589064 NFAT5O94916 1531 aa28.92■■■□□ 2.22
MBD3-205ENST00000589064 COG3Q96JB2 828 aa28.9■■■□□ 2.22
MBD3-205ENST00000589064 FAM196AQ6ZSG2 479 aa28.89■■■□□ 2.22
MBD3-205ENST00000589064 COL18A1P39060 1754 aa28.88■■■□□ 2.21
MBD3-205ENST00000589064 EIF4G2P78344 907 aaKnown RBP eCLIP28.88■■■□□ 2.21
MBD3-205ENST00000589064 OVOS2A0A0J9YW53 1432 aa28.87■■■□□ 2.21
MBD3-205ENST00000589064 OVOS2Q6IE36 1432 aa28.87■■■□□ 2.21
MBD3-205ENST00000589064 CARD10Q9BWT7 1032 aa28.87■■■□□ 2.21
MBD3-205ENST00000589064 HSPA5P11021 654 aaKnown RBP28.86■■■□□ 2.21
MBD3-205ENST00000589064 FYB1O15117 783 aa28.85■■■□□ 2.21
MBD3-205ENST00000589064 FBLN1P23142 703 aa28.85■■■□□ 2.21
MBD3-205ENST00000589064 GGNBP2Q9H3C7 697 aa28.85■■■□□ 2.21
MBD3-205ENST00000589064 TRIM37O94972 964 aa28.84■■■□□ 2.21
MBD3-205ENST00000589064 BAG6P46379 1132 aa28.84■■■□□ 2.21
MBD3-205ENST00000589064 POLR3GLQ9BT43 218 aa28.84■■■□□ 2.21
MBD3-205ENST00000589064 CARD14Q9BXL6 1004 aa28.83■■■□□ 2.21
MBD3-205ENST00000589064 DDB1Q16531 1140 aa28.81■■■□□ 2.2
MBD3-205ENST00000589064 ANKRD24Q8TF21 1146 aa28.81■■■□□ 2.2
MBD3-205ENST00000589064 NLRP2Q9NX02 1062 aa28.81■■■□□ 2.2
MBD3-205ENST00000589064 IP6K1Q92551 441 aa28.8■■■□□ 2.2
MBD3-205ENST00000589064 EN1Q05925 392 aaPredicted RBP28.79■■■□□ 2.2
MBD3-205ENST00000589064 CDCA7Q9BWT1 371 aaPredicted RBP28.79■■■□□ 2.2
MBD3-205ENST00000589064 ERBB3P21860 1342 aa28.79■■■□□ 2.2
MBD3-205ENST00000589064 USP54Q70EL1 1684 aa28.79■■■□□ 2.2
MBD3-205ENST00000589064 MAP3K19Q56UN5 1328 aa28.77■■■□□ 2.2
MBD3-205ENST00000589064 LTV1Q96GA3 475 aaPredicted RBP28.76■■■□□ 2.19
MBD3-205ENST00000589064 CCDC7Q96M83 1385 aa28.75■■■□□ 2.19
MBD3-205ENST00000589064 AMPHP49418 695 aa28.75■■■□□ 2.19
MBD3-205ENST00000589064 ABCC6O95255 1503 aa28.75■■■□□ 2.19
MBD3-205ENST00000589064 EXOC5O00471 708 aa28.74■■■□□ 2.19
MBD3-205ENST00000589064 APBA3O96018 575 aa28.74■■■□□ 2.19
MBD3-205ENST00000589064 RRS1Q15050 365 aaKnown RBP28.73■■■□□ 2.19
MBD3-205ENST00000589064 HOXC9P31274 260 aa28.72■■■□□ 2.19
MBD3-205ENST00000589064 MARCH10Q8NA82 808 aaPredicted RBP28.72■■■□□ 2.19
MBD3-205ENST00000589064 RGPD5Q99666 1765 aa28.72■■■□□ 2.19
MBD3-205ENST00000589064 NSD3Q9BZ95 1437 aa28.71■■■□□ 2.19
MBD3-205ENST00000589064 C11orf95C9JLR9 678 aaPredicted RBP28.71■■■□□ 2.19
MBD3-205ENST00000589064 EZH2Q15910 746 aaKnown RBP28.71■■■□□ 2.19
MBD3-205ENST00000589064 DISP2A7MBM2 1401 aa28.7■■■□□ 2.19
MBD3-205ENST00000589064 CAMKK2Q96RR4 588 aa28.69■■■□□ 2.18
MBD3-205ENST00000589064 PARP4Q9UKK3 1724 aaKnown RBP28.68■■■□□ 2.18
MBD3-205ENST00000589064 IL2RBP14784 551 aa28.67■■■□□ 2.18
MBD3-205ENST00000589064 OVOS2A0A0G2JMS6 1433 aa28.66■■■□□ 2.18
MBD3-205ENST00000589064 LTN1O94822 1766 aa28.64■■■□□ 2.18
MBD3-205ENST00000589064 PANK3Q9H999 370 aa28.64■■■□□ 2.17
MBD3-205ENST00000589064 CGNL1Q0VF96 1302 aa28.63■■■□□ 2.17
MBD3-205ENST00000589064 RGPD1P0DJD0 1748 aa28.63■■■□□ 2.17
MBD3-205ENST00000589064 MYOM1P52179 1685 aa28.62■■■□□ 2.17
MBD3-205ENST00000589064 LRRC37A3O60309 1634 aa28.62■■■□□ 2.17
MBD3-205ENST00000589064 PTF1AQ7RTS3 328 aa28.62■■■□□ 2.17
MBD3-205ENST00000589064 PSDA5PKW4 1024 aaPredicted RBP28.59■■■□□ 2.17
MBD3-205ENST00000589064 HSP90AB2PQ58FF8 381 aa28.59■■■□□ 2.17
MBD3-205ENST00000589064 BCL11BQ9C0K0 894 aaPredicted RBP28.59■■■□□ 2.17
MBD3-205ENST00000589064 RTL1A6NKG5 1358 aa28.59■■■□□ 2.17
MBD3-205ENST00000589064 EMILIN1Q9Y6C2 1016 aa28.59■■■□□ 2.17
MBD3-205ENST00000589064 NBPF6Q5VWK0 638 aa28.58■■■□□ 2.17
MBD3-205ENST00000589064 NBPF4Q96M43 638 aa28.58■■■□□ 2.17
MBD3-205ENST00000589064 TNS1Q9HBL0 1735 aaKnown RBP28.57■■■□□ 2.16
MBD3-205ENST00000589064 TNS2Q63HR2 1409 aa28.56■■■□□ 2.16
MBD3-205ENST00000589064 BCL9O00512 1426 aa28.55■■■□□ 2.16
MBD3-205ENST00000589064 PEAK1Q9H792 1746 aa28.55■■■□□ 2.16
MBD3-205ENST00000589064 PPM1GO15355 546 aaPredicted RBP28.55■■■□□ 2.16
MBD3-205ENST00000589064 PARD3Q8TEW0 1356 aa28.54■■■□□ 2.16
MBD3-205ENST00000589064 INSRP06213 1382 aa28.53■■■□□ 2.16
MBD3-205ENST00000589064 R3HDM1Q15032 1099 aaKnown RBP28.53■■■□□ 2.16
MBD3-205ENST00000589064 USHBP1Q8N6Y0 703 aa28.53■■■□□ 2.16
MBD3-205ENST00000589064 DDX54Q8TDD1 881 aaKnown RBP28.53■■■□□ 2.16
MBD3-205ENST00000589064 FLT4P35916 1363 aa28.53■■■□□ 2.16
MBD3-205ENST00000589064 PLSCR1O15162 318 aa28.53■■■□□ 2.16
MBD3-205ENST00000589064 KCNQ2O43526 872 aa28.53■■■□□ 2.16
MBD3-205ENST00000589064 TNNT2P45379 298 aaPredicted RBP28.53■■■□□ 2.16
MBD3-205ENST00000589064 ACSBG1Q96GR2 724 aa28.53■■■□□ 2.16
MBD3-205ENST00000589064 WNK3Q9BYP7 1800 aa28.52■■■□□ 2.16
MBD3-205ENST00000589064 KIF24Q5T7B8 1368 aa28.51■■■□□ 2.15
MBD3-205ENST00000589064 POLKQ9UBT6 870 aa28.5■■■□□ 2.15
MBD3-205ENST00000589064 KIF20BQ96Q89 1820 aa28.5■■■□□ 2.15
MBD3-205ENST00000589064 KIF7Q2M1P5 1343 aa28.5■■■□□ 2.15
MBD3-205ENST00000589064 SMG6Q86US8 1419 aaKnown RBP28.49■■■□□ 2.15
MBD3-205ENST00000589064 ZCRB1Q8TBF4 217 aaKnown RBP28.48■■■□□ 2.15
MBD3-205ENST00000589064 NBPF14Q5TI25 921 aa28.46■■■□□ 2.15
MBD3-205ENST00000589064 WASHC2AQ641Q2 1341 aa28.46■■■□□ 2.15
MBD3-205ENST00000589064 PROM2Q8N271 834 aa28.46■■■□□ 2.15
MBD3-205ENST00000589064 RAPGEF4Q8WZA2 1011 aa28.46■■■□□ 2.15
MBD3-205ENST00000589064 KNSTRNQ9Y448 316 aa28.46■■■□□ 2.15
MBD3-205ENST00000589064 TATP17735 454 aaPredicted RBP28.42■■■□□ 2.14
MBD3-205ENST00000589064 MORC1Q86VD1 984 aa28.42■■■□□ 2.14
MBD3-205ENST00000589064 MEGF6O75095 1541 aa28.42■■■□□ 2.14
MBD3-205ENST00000589064 FAM208AQ9UK61 1670 aaKnown RBP28.41■■■□□ 2.14
MBD3-205ENST00000589064 SBF2Q86WG5 1849 aa28.4■■■□□ 2.14
MBD3-205ENST00000589064 SRCAPQ6ZRS2 3230 aa28.39■■■□□ 2.14
MBD3-205ENST00000589064 TXNRD1Q16881 649 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms