RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 CRYBG1Q9Y4K1 1723 aa12.59□□□□□ -0.39
ZNF440-206ENST00000588954 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
ZNF440-206ENST00000588954 CC2D1BQ5T0F9 858 aaKnown RBP12.58□□□□□ -0.4
ZNF440-206ENST00000588954 UNC5CLQ8IV45 518 aa12.58□□□□□ -0.4
ZNF440-206ENST00000588954 TRPC5Q9UL62 973 aaPredicted RBP12.58□□□□□ -0.4
ZNF440-206ENST00000588954 MARF1Q9Y4F3 1742 aaKnown RBP12.58□□□□□ -0.4
ZNF440-206ENST00000588954 AATKQ6ZMQ8 1374 aa12.57□□□□□ -0.4
ZNF440-206ENST00000588954 COL14A1Q05707 1796 aaKnown RBP12.57□□□□□ -0.4
ZNF440-206ENST00000588954 TNNT2P45379 298 aaPredicted RBP12.57□□□□□ -0.4
ZNF440-206ENST00000588954 AMPHP49418 695 aa12.57□□□□□ -0.4
ZNF440-206ENST00000588954 CNGB1Q14028 1251 aaPredicted RBP12.57□□□□□ -0.4
ZNF440-206ENST00000588954 QTRT2Q9H974 415 aaKnown RBP12.57□□□□□ -0.4
ZNF440-206ENST00000588954 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
ZNF440-206ENST00000588954 STRN4Q9NRL3 753 aa12.56□□□□□ -0.4
ZNF440-206ENST00000588954 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
ZNF440-206ENST00000588954 SLIT2O94813 1529 aa12.56□□□□□ -0.4
ZNF440-206ENST00000588954 NFAT5O94916 1531 aa12.56□□□□□ -0.4
ZNF440-206ENST00000588954 RRS1Q15050 365 aaKnown RBP12.55□□□□□ -0.4
ZNF440-206ENST00000588954 RGS17Q9UGC6 210 aaPredicted RBP12.55□□□□□ -0.4
ZNF440-206ENST00000588954 MAP3K19Q56UN5 1328 aa12.55□□□□□ -0.4
ZNF440-206ENST00000588954 BCL9LQ86UU0 1499 aa12.54□□□□□ -0.4
ZNF440-206ENST00000588954 PPM1GO15355 546 aaPredicted RBP12.54□□□□□ -0.4
ZNF440-206ENST00000588954 CSB-PGBD3P0DP91 1061 aa12.54□□□□□ -0.4
ZNF440-206ENST00000588954 FBLN1P23142 703 aa12.54□□□□□ -0.4
ZNF440-206ENST00000588954 VPS72Q15906 364 aa12.54□□□□□ -0.4
ZNF440-206ENST00000588954 IP6K1Q92551 441 aa12.54□□□□□ -0.4
ZNF440-206ENST00000588954 RXRBP28702 533 aa12.53□□□□□ -0.4
ZNF440-206ENST00000588954 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
ZNF440-206ENST00000588954 NWD2Q9ULI1 1742 aa12.53□□□□□ -0.4
ZNF440-206ENST00000588954 RTL1A6NKG5 1358 aa12.53□□□□□ -0.4
ZNF440-206ENST00000588954 ABCC6O95255 1503 aa12.52□□□□□ -0.4
ZNF440-206ENST00000588954 PLCH1Q4KWH8 1693 aa12.52□□□□□ -0.4
ZNF440-206ENST00000588954 ANKRD26Q9UPS8 1709 aa12.52□□□□□ -0.41
ZNF440-206ENST00000588954 HOXC9P31274 260 aa12.52□□□□□ -0.41
ZNF440-206ENST00000588954 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
ZNF440-206ENST00000588954 POTEAQ6S8J7 498 aa12.52□□□□□ -0.41
ZNF440-206ENST00000588954 GJD4Q96KN9 370 aaPredicted RBP12.52□□□□□ -0.41
ZNF440-206ENST00000588954 KIF24Q5T7B8 1368 aa12.52□□□□□ -0.41
ZNF440-206ENST00000588954 BLMP54132 1417 aaPredicted RBP12.52□□□□□ -0.41
ZNF440-206ENST00000588954 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
ZNF440-206ENST00000588954 TOM1L2Q6ZVM7 507 aa12.51□□□□□ -0.41
ZNF440-206ENST00000588954 ANKRD24Q8TF21 1146 aa12.51□□□□□ -0.41
ZNF440-206ENST00000588954 POLKQ9UBT6 870 aa12.51□□□□□ -0.41
ZNF440-206ENST00000588954 EMILIN1Q9Y6C2 1016 aa12.51□□□□□ -0.41
ZNF440-206ENST00000588954 FLT4P35916 1363 aa12.51□□□□□ -0.41
ZNF440-206ENST00000588954 ATRNO75882 1429 aa12.51□□□□□ -0.41
ZNF440-206ENST00000588954 LARP1Q6PKG0 1096 aaKnown RBP12.5□□□□□ -0.41
ZNF440-206ENST00000588954 LTV1Q96GA3 475 aaPredicted RBP12.5□□□□□ -0.41
ZNF440-206ENST00000588954 WDR17Q8IZU2 1322 aa12.5□□□□□ -0.41
ZNF440-206ENST00000588954 SMG6Q86US8 1419 aaKnown RBP12.5□□□□□ -0.41
ZNF440-206ENST00000588954 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
ZNF440-206ENST00000588954 LTN1O94822 1766 aa12.5□□□□□ -0.41
ZNF440-206ENST00000588954 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.49□□□□□ -0.41
ZNF440-206ENST00000588954 LMO7Q8WWI1 1683 aa12.49□□□□□ -0.41
ZNF440-206ENST00000588954 SPATA31A5Q5VU36 1347 aa12.49□□□□□ -0.41
ZNF440-206ENST00000588954 SPATA31A7Q8IWB4 1347 aa12.49□□□□□ -0.41
ZNF440-206ENST00000588954 CAPN15O75808 1086 aa12.49□□□□□ -0.41
ZNF440-206ENST00000588954 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
ZNF440-206ENST00000588954 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
ZNF440-206ENST00000588954 COL18A1P39060 1754 aa12.48□□□□□ -0.41
ZNF440-206ENST00000588954 INSRP06213 1382 aa12.48□□□□□ -0.41
ZNF440-206ENST00000588954 ERBB3P21860 1342 aa12.48□□□□□ -0.41
ZNF440-206ENST00000588954 RALBP1Q15311 655 aa12.48□□□□□ -0.41
ZNF440-206ENST00000588954 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
ZNF440-206ENST00000588954 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
ZNF440-206ENST00000588954 CRB1P82279 1406 aa12.47□□□□□ -0.41
ZNF440-206ENST00000588954 SPATA31A1Q5TZJ5 1347 aa12.47□□□□□ -0.41
ZNF440-206ENST00000588954 A0A0G2JS52 829 aa12.47□□□□□ -0.41
ZNF440-206ENST00000588954 MTHFSP49914 203 aa12.47□□□□□ -0.41
ZNF440-206ENST00000588954 MYT1Q01538 1121 aa12.47□□□□□ -0.41
ZNF440-206ENST00000588954 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
ZNF440-206ENST00000588954 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
ZNF440-206ENST00000588954 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.41
ZNF440-206ENST00000588954 NRAPQ86VF7 1730 aa12.46□□□□□ -0.41
ZNF440-206ENST00000588954 CFAP53Q96M91 514 aa12.46□□□□□ -0.41
ZNF440-206ENST00000588954 PPP2R1AP30153 589 aa12.45□□□□□ -0.42
ZNF440-206ENST00000588954 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
ZNF440-206ENST00000588954 FAM98CQ17RN3 349 aaKnown RBP12.45□□□□□ -0.42
ZNF440-206ENST00000588954 BARGINQ6ZT62 677 aa12.45□□□□□ -0.42
ZNF440-206ENST00000588954 CDCA7Q9BWT1 371 aaPredicted RBP12.45□□□□□ -0.42
ZNF440-206ENST00000588954 PARD3Q8TEW0 1356 aa12.44□□□□□ -0.42
ZNF440-206ENST00000588954 RGPD5Q99666 1765 aa12.44□□□□□ -0.42
ZNF440-206ENST00000588954 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
ZNF440-206ENST00000588954 CDK12Q9NYV4 1490 aaPredicted RBP12.43□□□□□ -0.42
ZNF440-206ENST00000588954 ANP32CO43423 234 aa12.43□□□□□ -0.42
ZNF440-206ENST00000588954 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
ZNF440-206ENST00000588954 EIF4A2Q14240 407 aaKnown RBP12.43□□□□□ -0.42
ZNF440-206ENST00000588954 SEPT12Q8IYM1 358 aa12.43□□□□□ -0.42
ZNF440-206ENST00000588954 PEAK1Q9H792 1746 aa12.42□□□□□ -0.42
ZNF440-206ENST00000588954 DIAPH1O60610 1272 aaKnown RBP12.42□□□□□ -0.42
ZNF440-206ENST00000588954 GLI3P10071 1580 aa12.42□□□□□ -0.42
ZNF440-206ENST00000588954 MYBBP1AQ9BQG0 1328 aaKnown RBP12.41□□□□□ -0.42
ZNF440-206ENST00000588954 IL2RBP14784 551 aa12.41□□□□□ -0.42
ZNF440-206ENST00000588954 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
ZNF440-206ENST00000588954 RAPGEF4Q8WZA2 1011 aa12.41□□□□□ -0.42
ZNF440-206ENST00000588954 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
ZNF440-206ENST00000588954 PRKRIP1Q9H875 184 aaPredicted RBP12.41□□□□□ -0.42
ZNF440-206ENST00000588954 NUDCQ9Y266 331 aa12.41□□□□□ -0.42
ZNF440-206ENST00000588954 EYA1Q99502 592 aa12.4□□□□□ -0.42
ZNF440-206ENST00000588954 FAM208AQ9UK61 1670 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms