RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 IP6K1Q92551 441 aa19.79■□□□□ 0.76
CNN1-208ENST00000588935 RGS17Q9UGC6 210 aaPredicted RBP19.79■□□□□ 0.76
CNN1-208ENST00000588935 AATKQ6ZMQ8 1374 aa19.79■□□□□ 0.76
CNN1-208ENST00000588935 PLCH1Q4KWH8 1693 aa19.78■□□□□ 0.76
CNN1-208ENST00000588935 HOXC9P31274 260 aa19.78■□□□□ 0.76
CNN1-208ENST00000588935 UNC5CLQ8IV45 518 aa19.78■□□□□ 0.76
CNN1-208ENST00000588935 QTRT2Q9H974 415 aaKnown RBP19.78■□□□□ 0.76
CNN1-208ENST00000588935 CAMTA1Q9Y6Y1 1673 aa19.78■□□□□ 0.76
CNN1-208ENST00000588935 HSP90AB2PQ58FF8 381 aa19.77■□□□□ 0.76
CNN1-208ENST00000588935 COL18A1P39060 1754 aa19.77■□□□□ 0.76
CNN1-208ENST00000588935 MTHFSP49914 203 aa19.76■□□□□ 0.75
CNN1-208ENST00000588935 ZNF772Q68DY9 489 aaPredicted RBP19.76■□□□□ 0.75
CNN1-208ENST00000588935 USP35Q9P2H5 1018 aa19.76■□□□□ 0.75
CNN1-208ENST00000588935 SLIT2O94813 1529 aa19.76■□□□□ 0.75
CNN1-208ENST00000588935 BCL9LQ86UU0 1499 aa19.75■□□□□ 0.75
CNN1-208ENST00000588935 LARP1Q6PKG0 1096 aaKnown RBP19.75■□□□□ 0.75
CNN1-208ENST00000588935 ANKRD24Q8TF21 1146 aa19.75■□□□□ 0.75
CNN1-208ENST00000588935 PPP2R1AP30153 589 aa19.74■□□□□ 0.75
CNN1-208ENST00000588935 POTEAQ6S8J7 498 aa19.74■□□□□ 0.75
CNN1-208ENST00000588935 PEAK1Q9H792 1746 aa19.73■□□□□ 0.75
CNN1-208ENST00000588935 TOM1L2Q6ZVM7 507 aa19.73■□□□□ 0.75
CNN1-208ENST00000588935 TRPC5Q9UL62 973 aaPredicted RBP19.73■□□□□ 0.75
CNN1-208ENST00000588935 LMO7Q8WWI1 1683 aa19.72■□□□□ 0.75
CNN1-208ENST00000588935 NLRP2Q9NX02 1062 aa19.72■□□□□ 0.75
CNN1-208ENST00000588935 NWD2Q9ULI1 1742 aa19.72■□□□□ 0.75
CNN1-208ENST00000588935 FLT4P35916 1363 aa19.71■□□□□ 0.75
CNN1-208ENST00000588935 RALBP1Q15311 655 aa19.71■□□□□ 0.75
CNN1-208ENST00000588935 ANP32CO43423 234 aa19.7■□□□□ 0.74
CNN1-208ENST00000588935 VPS72Q15906 364 aa19.7■□□□□ 0.74
CNN1-208ENST00000588935 PRKRIP1Q9H875 184 aaPredicted RBP19.7■□□□□ 0.74
CNN1-208ENST00000588935 COL5A2P05997 1499 aaPredicted RBP19.7■□□□□ 0.74
CNN1-208ENST00000588935 NRAPQ86VF7 1730 aa19.7■□□□□ 0.74
CNN1-208ENST00000588935 PARD3Q8TEW0 1356 aa19.7■□□□□ 0.74
CNN1-208ENST00000588935 GJD4Q96KN9 370 aaPredicted RBP19.69■□□□□ 0.74
CNN1-208ENST00000588935 RTL1A6NKG5 1358 aa19.69■□□□□ 0.74
CNN1-208ENST00000588935 WDR17Q8IZU2 1322 aa19.68■□□□□ 0.74
CNN1-208ENST00000588935 INSRP06213 1382 aa19.68■□□□□ 0.74
CNN1-208ENST00000588935 BLMP54132 1417 aaPredicted RBP19.68■□□□□ 0.74
CNN1-208ENST00000588935 RXRBP28702 533 aa19.67■□□□□ 0.74
CNN1-208ENST00000588935 EIF4A2Q14240 407 aaKnown RBP19.67■□□□□ 0.74
CNN1-208ENST00000588935 USHBP1Q8N6Y0 703 aa19.67■□□□□ 0.74
CNN1-208ENST00000588935 ERBB3P21860 1342 aa19.67■□□□□ 0.74
CNN1-208ENST00000588935 RGPD2P0DJD1 1756 aa19.67■□□□□ 0.74
CNN1-208ENST00000588935 ATRNO75882 1429 aa19.67■□□□□ 0.74
CNN1-208ENST00000588935 A0A0G2JS52 829 aa19.66■□□□□ 0.74
CNN1-208ENST00000588935 MYT1Q01538 1121 aa19.66■□□□□ 0.74
CNN1-208ENST00000588935 SPATA31A5Q5VU36 1347 aa19.66■□□□□ 0.74
CNN1-208ENST00000588935 SPATA31A7Q8IWB4 1347 aa19.66■□□□□ 0.74
CNN1-208ENST00000588935 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.65■□□□□ 0.74
CNN1-208ENST00000588935 RBM6P78332 1123 aaKnown RBP19.65■□□□□ 0.74
CNN1-208ENST00000588935 FAM98CQ17RN3 349 aaKnown RBP19.65■□□□□ 0.74
CNN1-208ENST00000588935 NBPF6Q5VWK0 638 aa19.65■□□□□ 0.74
CNN1-208ENST00000588935 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
CNN1-208ENST00000588935 NBPF4Q96M43 638 aa19.65■□□□□ 0.74
CNN1-208ENST00000588935 CFAP53Q96M91 514 aa19.65■□□□□ 0.74
CNN1-208ENST00000588935 SPATA31A1Q5TZJ5 1347 aa19.65■□□□□ 0.74
CNN1-208ENST00000588935 KIF24Q5T7B8 1368 aa19.65■□□□□ 0.74
CNN1-208ENST00000588935 MYBBP1AQ9BQG0 1328 aaKnown RBP19.64■□□□□ 0.73
CNN1-208ENST00000588935 ABCC6O95255 1503 aa19.63■□□□□ 0.73
CNN1-208ENST00000588935 CRB1P82279 1406 aa19.63■□□□□ 0.73
CNN1-208ENST00000588935 SMG6Q86US8 1419 aaKnown RBP19.63■□□□□ 0.73
CNN1-208ENST00000588935 DIAPH1O60610 1272 aaKnown RBP19.63■□□□□ 0.73
CNN1-208ENST00000588935 TCP11L2Q8N4U5 519 aa19.63■□□□□ 0.73
CNN1-208ENST00000588935 CARD10Q9BWT7 1032 aa19.63■□□□□ 0.73
CNN1-208ENST00000588935 EYA1Q99502 592 aa19.62■□□□□ 0.73
CNN1-208ENST00000588935 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
CNN1-208ENST00000588935 U2SURPO15042 1029 aaKnown RBP19.61■□□□□ 0.73
CNN1-208ENST00000588935 IL13P35225 146 aa19.61■□□□□ 0.73
CNN1-208ENST00000588935 GLI3P10071 1580 aa19.6■□□□□ 0.73
CNN1-208ENST00000588935 SEPT12Q8IYM1 358 aa19.58■□□□□ 0.72
CNN1-208ENST00000588935 HMOX1P09601 288 aa19.57■□□□□ 0.72
CNN1-208ENST00000588935 CCDC184Q52MB2 194 aa19.57■□□□□ 0.72
CNN1-208ENST00000588935 SULT6B1Q6IMI4 303 aa19.56■□□□□ 0.72
CNN1-208ENST00000588935 AEBP1Q8IUX7 1158 aa19.56■□□□□ 0.72
CNN1-208ENST00000588935 NUDCQ9Y266 331 aa19.56■□□□□ 0.72
CNN1-208ENST00000588935 THRAP3Q9Y2W1 955 aaKnown RBP19.56■□□□□ 0.72
CNN1-208ENST00000588935 IL2RBP14784 551 aa19.55■□□□□ 0.72
CNN1-208ENST00000588935 BARGINQ6ZT62 677 aa19.55■□□□□ 0.72
CNN1-208ENST00000588935 FAM208AQ9UK61 1670 aaKnown RBP19.55■□□□□ 0.72
CNN1-208ENST00000588935 U2AF1L5P0DN76 240 aaPredicted RBP19.54■□□□□ 0.72
CNN1-208ENST00000588935 U2AF1Q01081 240 aaKnown RBP eCLIP19.54■□□□□ 0.72
CNN1-208ENST00000588935 RAPGEF4Q8WZA2 1011 aa19.54■□□□□ 0.72
CNN1-208ENST00000588935 COL3A1P02461 1466 aaPredicted RBP19.54■□□□□ 0.72
CNN1-208ENST00000588935 IGSF1Q8N6C5 1336 aa19.52■□□□□ 0.72
CNN1-208ENST00000588935 ONECUT3O60422 494 aaPredicted RBP19.52■□□□□ 0.72
CNN1-208ENST00000588935 TATP17735 454 aaPredicted RBP19.52■□□□□ 0.72
CNN1-208ENST00000588935 EXOC5O00471 708 aa19.51■□□□□ 0.71
CNN1-208ENST00000588935 FAM182BQ5T319 152 aa19.51■□□□□ 0.71
CNN1-208ENST00000588935 ILDR2Q71H61 639 aa19.51■□□□□ 0.71
CNN1-208ENST00000588935 MRS2Q9HD23 443 aa19.51■□□□□ 0.71
CNN1-208ENST00000588935 PDE3BQ13370 1112 aa19.5■□□□□ 0.71
CNN1-208ENST00000588935 DDB1Q16531 1140 aa19.5■□□□□ 0.71
CNN1-208ENST00000588935 MIER1Q8N108 512 aa19.5■□□□□ 0.71
CNN1-208ENST00000588935 RGS12O14924 1447 aa19.5■□□□□ 0.71
CNN1-208ENST00000588935 BRWD3Q6RI45 1802 aa19.49■□□□□ 0.71
CNN1-208ENST00000588935 DDX54Q8TDD1 881 aaKnown RBP19.49■□□□□ 0.71
CNN1-208ENST00000588935 CDCA7Q9BWT1 371 aaPredicted RBP19.49■□□□□ 0.71
CNN1-208ENST00000588935 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
CNN1-208ENST00000588935 MEGF6O75095 1541 aa19.47■□□□□ 0.71
CNN1-208ENST00000588935 WNK3Q9BYP7 1800 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms