RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 NUTM2AQ8IVF1 878 aaPredicted RBP22.78■■□□□ 1.24
SCAMP4-211ENST00000588907 LMO7Q8WWI1 1683 aa22.77■■□□□ 1.24
SCAMP4-211ENST00000588907 COL18A1P39060 1754 aa22.77■■□□□ 1.24
SCAMP4-211ENST00000588907 MIER1Q8N108 512 aa22.77■■□□□ 1.24
SCAMP4-211ENST00000588907 ZBTB7CA1YPR0 619 aa22.76■■□□□ 1.23
SCAMP4-211ENST00000588907 NWD2Q9ULI1 1742 aa22.75■■□□□ 1.23
SCAMP4-211ENST00000588907 FAM208AQ9UK61 1670 aaKnown RBP22.74■■□□□ 1.23
SCAMP4-211ENST00000588907 COL3A1P02461 1466 aaPredicted RBP22.74■■□□□ 1.23
SCAMP4-211ENST00000588907 ADAMTS2O95450 1211 aa22.74■■□□□ 1.23
SCAMP4-211ENST00000588907 LRP6O75581 1613 aa22.74■■□□□ 1.23
SCAMP4-211ENST00000588907 DIAPH1O60610 1272 aaKnown RBP22.73■■□□□ 1.23
SCAMP4-211ENST00000588907 MEX3CQ5U5Q3 659 aaKnown RBP22.73■■□□□ 1.23
SCAMP4-211ENST00000588907 MRS2Q9HD23 443 aa22.73■■□□□ 1.23
SCAMP4-211ENST00000588907 NUDCQ9Y266 331 aa22.73■■□□□ 1.23
SCAMP4-211ENST00000588907 PLCH1Q4KWH8 1693 aa22.72■■□□□ 1.23
SCAMP4-211ENST00000588907 FAM83GA6ND36 823 aa22.72■■□□□ 1.23
SCAMP4-211ENST00000588907 HSP90AB2PQ58FF8 381 aa22.72■■□□□ 1.23
SCAMP4-211ENST00000588907 CHRNA2Q15822 529 aa22.71■■□□□ 1.23
SCAMP4-211ENST00000588907 ERBB3P21860 1342 aa22.7■■□□□ 1.22
SCAMP4-211ENST00000588907 COL5A2P05997 1499 aaPredicted RBP22.7■■□□□ 1.22
SCAMP4-211ENST00000588907 SLIT2O94813 1529 aa22.7■■□□□ 1.22
SCAMP4-211ENST00000588907 CAMTA1Q9Y6Y1 1673 aa22.7■■□□□ 1.22
SCAMP4-211ENST00000588907 RGPD5Q99666 1765 aa22.68■■□□□ 1.22
SCAMP4-211ENST00000588907 ANKRD24Q8TF21 1146 aa22.68■■□□□ 1.22
SCAMP4-211ENST00000588907 BTG4Q9NY30 223 aa22.68■■□□□ 1.22
SCAMP4-211ENST00000588907 AXIN2Q9Y2T1 843 aa22.68■■□□□ 1.22
SCAMP4-211ENST00000588907 IL13P35225 146 aa22.67■■□□□ 1.22
SCAMP4-211ENST00000588907 EIF4A2Q14240 407 aaKnown RBP22.67■■□□□ 1.22
SCAMP4-211ENST00000588907 WDR43Q15061 677 aaKnown RBP eCLIP22.67■■□□□ 1.22
SCAMP4-211ENST00000588907 FNBP4Q8N3X1 1017 aaPredicted RBP22.67■■□□□ 1.22
SCAMP4-211ENST00000588907 NGLY1Q96IV0 654 aa22.67■■□□□ 1.22
SCAMP4-211ENST00000588907 C8orf37Q96NL8 207 aa22.67■■□□□ 1.22
SCAMP4-211ENST00000588907 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.67■■□□□ 1.22
SCAMP4-211ENST00000588907 EVA1CP58658 441 aa22.66■■□□□ 1.22
SCAMP4-211ENST00000588907 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
SCAMP4-211ENST00000588907 WDR17Q8IZU2 1322 aa22.65■■□□□ 1.22
SCAMP4-211ENST00000588907 RGPD1P0DJD0 1748 aa22.65■■□□□ 1.22
SCAMP4-211ENST00000588907 CSB-PGBD3P0DP91 1061 aa22.64■■□□□ 1.21
SCAMP4-211ENST00000588907 IGSF1Q8N6C5 1336 aa22.62■■□□□ 1.21
SCAMP4-211ENST00000588907 UNC5CLQ8IV45 518 aa22.62■■□□□ 1.21
SCAMP4-211ENST00000588907 LTV1Q96GA3 475 aaPredicted RBP22.62■■□□□ 1.21
SCAMP4-211ENST00000588907 PNNQ9H307 717 aaKnown RBP22.62■■□□□ 1.21
SCAMP4-211ENST00000588907 CRB1P82279 1406 aa22.62■■□□□ 1.21
SCAMP4-211ENST00000588907 U2SURPO15042 1029 aaKnown RBP22.61■■□□□ 1.21
SCAMP4-211ENST00000588907 PNISRQ8TF01 805 aaKnown RBP22.61■■□□□ 1.21
SCAMP4-211ENST00000588907 PLEKHG2Q9H7P9 1386 aa22.61■■□□□ 1.21
SCAMP4-211ENST00000588907 NCAPD2Q15021 1401 aa22.6■■□□□ 1.21
SCAMP4-211ENST00000588907 CCDC184Q52MB2 194 aa22.6■■□□□ 1.21
SCAMP4-211ENST00000588907 ILDR1Q86SU0 546 aaPredicted RBP22.6■■□□□ 1.21
SCAMP4-211ENST00000588907 STRN4Q9NRL3 753 aa22.6■■□□□ 1.21
SCAMP4-211ENST00000588907 BCL9LQ86UU0 1499 aa22.6■■□□□ 1.21
SCAMP4-211ENST00000588907 U2AF1L5P0DN76 240 aaPredicted RBP22.59■■□□□ 1.21
SCAMP4-211ENST00000588907 U2AF1Q01081 240 aaKnown RBP eCLIP22.59■■□□□ 1.21
SCAMP4-211ENST00000588907 TOM1L2Q6ZVM7 507 aa22.59■■□□□ 1.21
SCAMP4-211ENST00000588907 USP21Q9UK80 565 aa22.59■■□□□ 1.21
SCAMP4-211ENST00000588907 KDRP35968 1356 aa22.59■■□□□ 1.21
SCAMP4-211ENST00000588907 AFF2P51816 1311 aa22.58■■□□□ 1.21
SCAMP4-211ENST00000588907 EYA1Q99502 592 aa22.58■■□□□ 1.21
SCAMP4-211ENST00000588907 CARD10Q9BWT7 1032 aa22.58■■□□□ 1.21
SCAMP4-211ENST00000588907 NLRP2Q9NX02 1062 aa22.58■■□□□ 1.21
SCAMP4-211ENST00000588907 FCHSD2O94868 740 aa22.57■■□□□ 1.2
SCAMP4-211ENST00000588907 VPS72Q15906 364 aa22.56■■□□□ 1.2
SCAMP4-211ENST00000588907 LARP1Q6PKG0 1096 aaKnown RBP22.56■■□□□ 1.2
SCAMP4-211ENST00000588907 NEFMP07197 916 aa22.55■■□□□ 1.2
SCAMP4-211ENST00000588907 NBPF6Q5VWK0 638 aa22.55■■□□□ 1.2
SCAMP4-211ENST00000588907 ZNF772Q68DY9 489 aaPredicted RBP22.55■■□□□ 1.2
SCAMP4-211ENST00000588907 NBPF4Q96M43 638 aa22.55■■□□□ 1.2
SCAMP4-211ENST00000588907 THRAP3Q9Y2W1 955 aaKnown RBP22.55■■□□□ 1.2
SCAMP4-211ENST00000588907 RGPD2P0DJD1 1756 aa22.54■■□□□ 1.2
SCAMP4-211ENST00000588907 SULT6B1Q6IMI4 303 aa22.54■■□□□ 1.2
SCAMP4-211ENST00000588907 TRPC5Q9UL62 973 aaPredicted RBP22.54■■□□□ 1.2
SCAMP4-211ENST00000588907 FAM9BQ8IZU0 186 aa22.52■■□□□ 1.2
SCAMP4-211ENST00000588907 CDCA7Q9BWT1 371 aaPredicted RBP22.52■■□□□ 1.2
SCAMP4-211ENST00000588907 ADAMTS8Q9UP79 889 aa22.52■■□□□ 1.2
SCAMP4-211ENST00000588907 SPATA31A1Q5TZJ5 1347 aa22.52■■□□□ 1.2
SCAMP4-211ENST00000588907 SPATA31A5Q5VU36 1347 aa22.52■■□□□ 1.2
SCAMP4-211ENST00000588907 SPATA31A7Q8IWB4 1347 aa22.52■■□□□ 1.2
SCAMP4-211ENST00000588907 ATRNO75882 1429 aa22.51■■□□□ 1.19
SCAMP4-211ENST00000588907 TCP11L2Q8N4U5 519 aa22.51■■□□□ 1.19
SCAMP4-211ENST00000588907 RAPGEF4Q8WZA2 1011 aa22.51■■□□□ 1.19
SCAMP4-211ENST00000588907 RSPH6AQ9H0K4 717 aa22.51■■□□□ 1.19
SCAMP4-211ENST00000588907 PARP4Q9UKK3 1724 aaKnown RBP22.5■■□□□ 1.19
SCAMP4-211ENST00000588907 HMOX1P09601 288 aa22.49■■□□□ 1.19
SCAMP4-211ENST00000588907 CCDC9Q9Y3X0 531 aaKnown RBP22.49■■□□□ 1.19
SCAMP4-211ENST00000588907 MAPK8IP3Q9UPT6 1336 aa22.49■■□□□ 1.19
SCAMP4-211ENST00000588907 BARGINQ6ZT62 677 aa22.48■■□□□ 1.19
SCAMP4-211ENST00000588907 WNK3Q9BYP7 1800 aa22.47■■□□□ 1.19
SCAMP4-211ENST00000588907 IL2RBP14784 551 aa22.47■■□□□ 1.19
SCAMP4-211ENST00000588907 TATP17735 454 aaPredicted RBP22.47■■□□□ 1.19
SCAMP4-211ENST00000588907 PRKAR2BP31323 418 aa22.47■■□□□ 1.19
SCAMP4-211ENST00000588907 AEBP1Q8IUX7 1158 aa22.47■■□□□ 1.19
SCAMP4-211ENST00000588907 USHBP1Q8N6Y0 703 aa22.47■■□□□ 1.19
SCAMP4-211ENST00000588907 RUNDC1Q96C34 613 aa22.47■■□□□ 1.19
SCAMP4-211ENST00000588907 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
SCAMP4-211ENST00000588907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.46■■□□□ 1.19
SCAMP4-211ENST00000588907 AMOTQ4VCS5 1084 aa22.45■■□□□ 1.18
SCAMP4-211ENST00000588907 GJD4Q96KN9 370 aaPredicted RBP22.45■■□□□ 1.18
SCAMP4-211ENST00000588907 USP35Q9P2H5 1018 aa22.45■■□□□ 1.18
SCAMP4-211ENST00000588907 OVOS2A0A0G2JMS6 1433 aa22.45■■□□□ 1.18
SCAMP4-211ENST00000588907 DISP2A7MBM2 1401 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms