RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 WDR17Q8IZU2 1322 aa24.09■■□□□ 1.45
SEC11C-205ENST00000588875 LRRC37A3O60309 1634 aa24.08■■□□□ 1.45
SEC11C-205ENST00000588875 ARHGEF25Q86VW2 580 aa24.06■■□□□ 1.44
SEC11C-205ENST00000588875 COL18A1P39060 1754 aa24.06■■□□□ 1.44
SEC11C-205ENST00000588875 SBF2Q86WG5 1849 aa24.05■■□□□ 1.44
SEC11C-205ENST00000588875 ZBTB7AO95365 584 aa24.05■■□□□ 1.44
SEC11C-205ENST00000588875 RGPD3A6NKT7 1758 aaPredicted RBP24.04■■□□□ 1.44
SEC11C-205ENST00000588875 RGPD4Q7Z3J3 1758 aa24.04■■□□□ 1.44
SEC11C-205ENST00000588875 BCL9O00512 1426 aa24.04■■□□□ 1.44
SEC11C-205ENST00000588875 PTGER2P43116 358 aa24.04■■□□□ 1.44
SEC11C-205ENST00000588875 CDCA7Q9BWT1 371 aaPredicted RBP24.04■■□□□ 1.44
SEC11C-205ENST00000588875 CASZ1Q86V15 1759 aa24.03■■□□□ 1.44
SEC11C-205ENST00000588875 CARD10Q9BWT7 1032 aa24.02■■□□□ 1.44
SEC11C-205ENST00000588875 ATF5Q9Y2D1 282 aaPredicted RBP24.02■■□□□ 1.44
SEC11C-205ENST00000588875 CPSF1Q10570 1443 aaKnown RBP24.01■■□□□ 1.43
SEC11C-205ENST00000588875 TXNRD1Q16881 649 aa24.01■■□□□ 1.43
SEC11C-205ENST00000588875 TTC21BQ7Z4L5 1316 aa24.01■■□□□ 1.43
SEC11C-205ENST00000588875 PIK3C2AO00443 1686 aa24.01■■□□□ 1.43
SEC11C-205ENST00000588875 SOX12O15370 315 aa24■■□□□ 1.43
SEC11C-205ENST00000588875 KCNH5Q8NCM2 988 aa23.99■■□□□ 1.43
SEC11C-205ENST00000588875 QRICH2Q9H0J4 1663 aa23.99■■□□□ 1.43
SEC11C-205ENST00000588875 EXOC5O00471 708 aa23.98■■□□□ 1.43
SEC11C-205ENST00000588875 CSB-PGBD3P0DP91 1061 aa23.98■■□□□ 1.43
SEC11C-205ENST00000588875 SLC15A2Q16348 729 aa23.98■■□□□ 1.43
SEC11C-205ENST00000588875 ZNF692Q9BU19 519 aaPredicted RBP23.98■■□□□ 1.43
SEC11C-205ENST00000588875 STK32BQ9NY57 414 aa23.98■■□□□ 1.43
SEC11C-205ENST00000588875 EVC2Q86UK5 1308 aa23.98■■□□□ 1.43
SEC11C-205ENST00000588875 L3MBTL2Q969R5 705 aa23.95■■□□□ 1.42
SEC11C-205ENST00000588875 SYT17Q9BSW7 474 aa23.94■■□□□ 1.42
SEC11C-205ENST00000588875 WNK3Q9BYP7 1800 aa23.94■■□□□ 1.42
SEC11C-205ENST00000588875 UTRNP46939 3433 aa23.93■■□□□ 1.42
SEC11C-205ENST00000588875 SGIP1Q9BQI5 828 aa23.93■■□□□ 1.42
SEC11C-205ENST00000588875 FHDC1Q9C0D6 1143 aaPredicted RBP23.93■■□□□ 1.42
SEC11C-205ENST00000588875 MYOM1P52179 1685 aa23.92■■□□□ 1.42
SEC11C-205ENST00000588875 TTC21AQ8NDW8 1320 aa23.92■■□□□ 1.42
SEC11C-205ENST00000588875 ZNF784Q8NCA9 323 aaPredicted RBP23.92■■□□□ 1.42
SEC11C-205ENST00000588875 MTFR1LQ9H019 292 aa23.91■■□□□ 1.42
SEC11C-205ENST00000588875 RGPD5Q99666 1765 aa23.91■■□□□ 1.42
SEC11C-205ENST00000588875 CCDC7Q96M83 1385 aa23.91■■□□□ 1.42
SEC11C-205ENST00000588875 NFAT5O94916 1531 aa23.9■■□□□ 1.42
SEC11C-205ENST00000588875 ACSBG1Q96GR2 724 aa23.9■■□□□ 1.42
SEC11C-205ENST00000588875 AKAP12Q02952 1782 aa23.9■■□□□ 1.42
SEC11C-205ENST00000588875 KTN1Q86UP2 1357 aaKnown RBP23.88■■□□□ 1.41
SEC11C-205ENST00000588875 TRPM1Q7Z4N2 1603 aa23.88■■□□□ 1.41
SEC11C-205ENST00000588875 TNS2Q63HR2 1409 aa23.87■■□□□ 1.41
SEC11C-205ENST00000588875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
SEC11C-205ENST00000588875 ARXQ96QS3 562 aa23.84■■□□□ 1.41
SEC11C-205ENST00000588875 SIN3AQ96ST3 1273 aa23.84■■□□□ 1.41
SEC11C-205ENST00000588875 NLRP2Q9NX02 1062 aa23.84■■□□□ 1.41
SEC11C-205ENST00000588875 ERBB3P21860 1342 aa23.84■■□□□ 1.41
SEC11C-205ENST00000588875 ROCK2O75116 1388 aaKnown RBP23.82■■□□□ 1.4
SEC11C-205ENST00000588875 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
SEC11C-205ENST00000588875 ZNF827Q17R98 1081 aa23.82■■□□□ 1.4
SEC11C-205ENST00000588875 ABCC6O95255 1503 aa23.81■■□□□ 1.4
SEC11C-205ENST00000588875 IL2RBP14784 551 aa23.81■■□□□ 1.4
SEC11C-205ENST00000588875 NME9Q86XW9 330 aa23.81■■□□□ 1.4
SEC11C-205ENST00000588875 LRRC4BQ9NT99 713 aa23.81■■□□□ 1.4
SEC11C-205ENST00000588875 NHSQ6T4R5 1651 aa23.8■■□□□ 1.4
SEC11C-205ENST00000588875 PAPPAQ13219 1627 aa23.78■■□□□ 1.4
SEC11C-205ENST00000588875 ANKRD24Q8TF21 1146 aa23.78■■□□□ 1.4
SEC11C-205ENST00000588875 MAP3K5Q99683 1374 aa23.77■■□□□ 1.4
SEC11C-205ENST00000588875 SBNO2Q9Y2G9 1366 aa23.77■■□□□ 1.4
SEC11C-205ENST00000588875 CD163L1Q9NR16 1453 aa23.75■■□□□ 1.39
SEC11C-205ENST00000588875 NEUROD1Q13562 356 aa23.75■■□□□ 1.39
SEC11C-205ENST00000588875 AKT1S1Q96B36 256 aa23.75■■□□□ 1.39
SEC11C-205ENST00000588875 C1QTNF8P60827 252 aa23.73■■□□□ 1.39
SEC11C-205ENST00000588875 MON2Q7Z3U7 1717 aa23.73■■□□□ 1.39
SEC11C-205ENST00000588875 TMC1Q8TDI8 760 aa23.72■■□□□ 1.39
SEC11C-205ENST00000588875 SLC12A5Q9H2X9 1139 aa23.72■■□□□ 1.39
SEC11C-205ENST00000588875 BTAF1O14981 1849 aa23.72■■□□□ 1.39
SEC11C-205ENST00000588875 SENP3-EIF4A1A0A087X0R7 540 aa23.7■■□□□ 1.38
SEC11C-205ENST00000588875 GPR162Q16538 588 aa23.7■■□□□ 1.38
SEC11C-205ENST00000588875 DDX54Q8TDD1 881 aaKnown RBP23.7■■□□□ 1.38
SEC11C-205ENST00000588875 SLC27A3Q5K4L6 730 aa23.69■■□□□ 1.38
SEC11C-205ENST00000588875 SLC16A10Q8TF71 515 aa23.69■■□□□ 1.38
SEC11C-205ENST00000588875 USP54Q70EL1 1684 aa23.69■■□□□ 1.38
SEC11C-205ENST00000588875 PNPLA7Q6ZV29 1317 aa23.68■■□□□ 1.38
SEC11C-205ENST00000588875 KCNQ4P56696 695 aa23.68■■□□□ 1.38
SEC11C-205ENST00000588875 HDGFL2Q7Z4V5 671 aaPredicted RBP23.68■■□□□ 1.38
SEC11C-205ENST00000588875 CHD4Q14839 1912 aa23.67■■□□□ 1.38
SEC11C-205ENST00000588875 IP6K1Q92551 441 aa23.67■■□□□ 1.38
SEC11C-205ENST00000588875 KLHL34Q8N239 644 aa23.66■■□□□ 1.38
SEC11C-205ENST00000588875 EDC4Q6P2E9 1401 aaKnown RBP23.66■■□□□ 1.38
SEC11C-205ENST00000588875 LTN1O94822 1766 aa23.65■■□□□ 1.38
SEC11C-205ENST00000588875 LTV1Q96GA3 475 aaPredicted RBP23.65■■□□□ 1.38
SEC11C-205ENST00000588875 POLD1P28340 1107 aa23.64■■□□□ 1.37
SEC11C-205ENST00000588875 PRIM1P49642 420 aaKnown RBP23.64■■□□□ 1.37
SEC11C-205ENST00000588875 CARD11Q9BXL7 1154 aa23.64■■□□□ 1.37
SEC11C-205ENST00000588875 KAT6BQ8WYB5 2073 aa23.64■■□□□ 1.37
SEC11C-205ENST00000588875 NLGN2Q8NFZ4 835 aa23.63■■□□□ 1.37
SEC11C-205ENST00000588875 TFCP2L1Q9NZI6 479 aa23.63■■□□□ 1.37
SEC11C-205ENST00000588875 A0A1W2PP64 1363 aa23.63■■□□□ 1.37
SEC11C-205ENST00000588875 PELP1Q8IZL8 1130 aaKnown RBP23.62■■□□□ 1.37
SEC11C-205ENST00000588875 SYTL4Q96C24 671 aaPredicted RBP23.62■■□□□ 1.37
SEC11C-205ENST00000588875 TERF2IPQ9NYB0 399 aa23.62■■□□□ 1.37
SEC11C-205ENST00000588875 GOLGB1Q14789 3259 aaKnown RBP23.61■■□□□ 1.37
SEC11C-205ENST00000588875 FBLN1P23142 703 aa23.6■■□□□ 1.37
SEC11C-205ENST00000588875 NSD2O96028 1365 aa23.6■■□□□ 1.37
SEC11C-205ENST00000588875 ANKRD36BQ8N2N9 1353 aa23.59■■□□□ 1.37
SEC11C-205ENST00000588875 MAP3K19Q56UN5 1328 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms