RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
CHUK-203ENST00000588656 UNC13BO14795 1591 aa8.68□□□□□ -1.02
CHUK-203ENST00000588656 SHPRHQ149N8 1683 aa8.68□□□□□ -1.02
CHUK-203ENST00000588656 TRIM6-TRIM34B2RNG4 842 aa8.67□□□□□ -1.02
CHUK-203ENST00000588656 ZFYVE9O95405 1425 aa8.67□□□□□ -1.02
CHUK-203ENST00000588656 PDIA6Q15084 440 aa8.67□□□□□ -1.02
CHUK-203ENST00000588656 E2F4Q16254 413 aa8.67□□□□□ -1.02
CHUK-203ENST00000588656 ZFRQ96KR1 1074 aaKnown RBP8.67□□□□□ -1.02
CHUK-203ENST00000588656 WDR70Q9NW82 654 aa8.67□□□□□ -1.02
CHUK-203ENST00000588656 SPHKAPQ2M3C7 1700 aa8.66□□□□□ -1.02
CHUK-203ENST00000588656 SOWAHBA6NEL2 793 aa8.66□□□□□ -1.02
CHUK-203ENST00000588656 MEX3CQ5U5Q3 659 aaKnown RBP8.66□□□□□ -1.02
CHUK-203ENST00000588656 NYAP1Q6ZVC0 841 aa8.66□□□□□ -1.02
CHUK-203ENST00000588656 PPARGC1BQ86YN6 1023 aaKnown RBP8.66□□□□□ -1.02
CHUK-203ENST00000588656 SLAIN2Q9P270 581 aa8.66□□□□□ -1.02
CHUK-203ENST00000588656 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.02
CHUK-203ENST00000588656 ADGRL2O95490 1459 aa8.65□□□□□ -1.02
CHUK-203ENST00000588656 ANKRD50Q9ULJ7 1429 aa8.65□□□□□ -1.02
CHUK-203ENST00000588656 NUTM2BA6NNL0 878 aaPredicted RBP8.65□□□□□ -1.02
CHUK-203ENST00000588656 NUTM2EB1AL46 878 aaPredicted RBP8.65□□□□□ -1.02
CHUK-203ENST00000588656 ITGAEP38570 1179 aa8.65□□□□□ -1.02
CHUK-203ENST00000588656 NUTM2AQ8IVF1 878 aaPredicted RBP8.65□□□□□ -1.02
CHUK-203ENST00000588656 NALCNQ8IZF0 1738 aa8.65□□□□□ -1.03
CHUK-203ENST00000588656 IQGAP3Q86VI3 1631 aa8.65□□□□□ -1.03
CHUK-203ENST00000588656 PLEKHG1Q9ULL1 1385 aa8.64□□□□□ -1.03
CHUK-203ENST00000588656 EN1Q05925 392 aaPredicted RBP8.64□□□□□ -1.03
CHUK-203ENST00000588656 NBR1Q14596 966 aa8.64□□□□□ -1.03
CHUK-203ENST00000588656 FAM98CQ17RN3 349 aaKnown RBP8.64□□□□□ -1.03
CHUK-203ENST00000588656 PAXIP1Q6ZW49 1069 aaPredicted RBP8.64□□□□□ -1.03
CHUK-203ENST00000588656 PACS2Q86VP3 889 aa8.64□□□□□ -1.03
CHUK-203ENST00000588656 CFAP44Q96MT7 982 aa8.64□□□□□ -1.03
CHUK-203ENST00000588656 ARIH1Q9Y4X5 557 aaPredicted RBP8.64□□□□□ -1.03
CHUK-203ENST00000588656 ADAMTS13Q76LX8 1427 aa8.63□□□□□ -1.03
CHUK-203ENST00000588656 PTPRUQ92729 1446 aa8.63□□□□□ -1.03
CHUK-203ENST00000588656 JCADQ9P266 1359 aa8.63□□□□□ -1.03
CHUK-203ENST00000588656 AHDC1Q5TGY3 1603 aaPredicted RBP8.63□□□□□ -1.03
CHUK-203ENST00000588656 MAP3K7O43318 606 aa8.63□□□□□ -1.03
CHUK-203ENST00000588656 BCAMP50895 628 aa8.63□□□□□ -1.03
CHUK-203ENST00000588656 DDX17Q92841 729 aaKnown RBP8.63□□□□□ -1.03
CHUK-203ENST00000588656 DIP2AQ14689 1571 aa8.63□□□□□ -1.03
CHUK-203ENST00000588656 XRN1Q8IZH2 1706 aaKnown RBP8.63□□□□□ -1.03
CHUK-203ENST00000588656 NHSL1Q5SYE7 1610 aa8.62□□□□□ -1.03
CHUK-203ENST00000588656 A0A0G2JS52 829 aa8.62□□□□□ -1.03
CHUK-203ENST00000588656 SEPT9Q9UHD8 586 aaPredicted RBP8.62□□□□□ -1.03
CHUK-203ENST00000588656 TRPM2O94759 1503 aa8.62□□□□□ -1.03
CHUK-203ENST00000588656 RPRD2Q5VT52 1461 aaKnown RBP8.62□□□□□ -1.03
CHUK-203ENST00000588656 KIF1BO60333 1816 aa8.61□□□□□ -1.03
CHUK-203ENST00000588656 SLC52A1Q9NWF4 448 aa8.61□□□□□ -1.03
CHUK-203ENST00000588656 ASXL1Q8IXJ9 1541 aa8.6□□□□□ -1.03
CHUK-203ENST00000588656 ITGBL1O95965 494 aaPredicted RBP8.6□□□□□ -1.03
CHUK-203ENST00000588656 TSR1Q2NL82 804 aaKnown RBP8.6□□□□□ -1.03
CHUK-203ENST00000588656 RTN4Q9NQC3 1192 aaKnown RBP8.6□□□□□ -1.03
CHUK-203ENST00000588656 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
CHUK-203ENST00000588656 CLTCL1P53675 1640 aa8.6□□□□□ -1.03
CHUK-203ENST00000588656 ATF3P18847 181 aa8.59□□□□□ -1.03
CHUK-203ENST00000588656 BRINP3Q76B58 766 aa8.59□□□□□ -1.03
CHUK-203ENST00000588656 LRCH3Q96II8 777 aa8.59□□□□□ -1.03
CHUK-203ENST00000588656 WBP1LQ9NX94 342 aa8.59□□□□□ -1.03
CHUK-203ENST00000588656 TSR3Q9UJK0 312 aaKnown RBP8.59□□□□□ -1.03
CHUK-203ENST00000588656 AMOTL2Q9Y2J4 779 aa8.59□□□□□ -1.03
CHUK-203ENST00000588656 TSKSQ9UJT2 592 aa8.58□□□□□ -1.04
CHUK-203ENST00000588656 AFF2P51816 1311 aa8.57□□□□□ -1.04
CHUK-203ENST00000588656 GRXCR2A6NFK2 248 aa8.57□□□□□ -1.04
CHUK-203ENST00000588656 PRSS12P56730 875 aa8.57□□□□□ -1.04
CHUK-203ENST00000588656 ZNF326Q5BKZ1 582 aaKnown RBP8.57□□□□□ -1.04
CHUK-203ENST00000588656 CDCA7LQ96GN5 454 aa8.57□□□□□ -1.04
CHUK-203ENST00000588656 TBX22Q9Y458 520 aa8.57□□□□□ -1.04
CHUK-203ENST00000588656 NUP155O75694 1391 aa8.57□□□□□ -1.04
CHUK-203ENST00000588656 SPATA31A6Q5VVP1 1343 aa8.56□□□□□ -1.04
CHUK-203ENST00000588656 RGS12O14924 1447 aa8.56□□□□□ -1.04
CHUK-203ENST00000588656 MST1RQ04912 1400 aa8.56□□□□□ -1.04
CHUK-203ENST00000588656 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
CHUK-203ENST00000588656 KCNC4Q03721 635 aa8.56□□□□□ -1.04
CHUK-203ENST00000588656 C8orf37Q96NL8 207 aa8.56□□□□□ -1.04
CHUK-203ENST00000588656 C19orf44Q9H6X5 657 aa8.56□□□□□ -1.04
CHUK-203ENST00000588656 METP08581 1390 aa8.56□□□□□ -1.04
CHUK-203ENST00000588656 SETBP1Q9Y6X0 1596 aa8.56□□□□□ -1.04
CHUK-203ENST00000588656 MARF1Q9Y4F3 1742 aaKnown RBP8.55□□□□□ -1.04
CHUK-203ENST00000588656 ADAMTS2O95450 1211 aa8.55□□□□□ -1.04
CHUK-203ENST00000588656 RXRBP28702 533 aa8.55□□□□□ -1.04
CHUK-203ENST00000588656 ZNF772Q68DY9 489 aaPredicted RBP8.55□□□□□ -1.04
CHUK-203ENST00000588656 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHUK-203ENST00000588656 HPS5Q9UPZ3 1129 aa8.55□□□□□ -1.04
CHUK-203ENST00000588656 RGPD8O14715 1765 aaPredicted RBP8.54□□□□□ -1.04
CHUK-203ENST00000588656 PPLO60437 1756 aa8.54□□□□□ -1.04
CHUK-203ENST00000588656 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
CHUK-203ENST00000588656 PPP4CP60510 307 aa8.54□□□□□ -1.04
CHUK-203ENST00000588656 IRX2Q9BZI1 471 aaPredicted RBP8.54□□□□□ -1.04
CHUK-203ENST00000588656 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
CHUK-203ENST00000588656 BRWD3Q6RI45 1802 aa8.52□□□□□ -1.04
CHUK-203ENST00000588656 PNPLA6Q8IY17 1366 aa8.52□□□□□ -1.05
CHUK-203ENST00000588656 OSBPP22059 807 aa8.52□□□□□ -1.05
CHUK-203ENST00000588656 TATDN2Q93075 761 aa8.52□□□□□ -1.05
CHUK-203ENST00000588656 ADGRL3Q9HAR2 1447 aa8.52□□□□□ -1.05
CHUK-203ENST00000588656 NCOA3Q9Y6Q9 1424 aa8.52□□□□□ -1.05
CHUK-203ENST00000588656 PIK3R4Q99570 1358 aa8.51□□□□□ -1.05
CHUK-203ENST00000588656 NBPF26B4DH59 902 aa8.51□□□□□ -1.05
CHUK-203ENST00000588656 PRIM1P49642 420 aaKnown RBP8.51□□□□□ -1.05
CHUK-203ENST00000588656 SETD5Q9C0A6 1442 aa8.51□□□□□ -1.05
CHUK-203ENST00000588656 EP400Q96L91 3159 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms