RNA–Protein interactions for RNA: ENST00000588640.5

GFAP-213, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-213ENST00000588640 KTN1Q86UP2 1357 aaKnown RBP25.77■■□□□ 1.72
GFAP-213ENST00000588640 SBNO2Q9Y2G9 1366 aa25.77■■□□□ 1.72
GFAP-213ENST00000588640 OVOS2A0A0G2JMS6 1433 aa25.77■■□□□ 1.72
GFAP-213ENST00000588640 OVOS2A0A0J9YW53 1432 aa25.77■■□□□ 1.72
GFAP-213ENST00000588640 OVOS2Q6IE36 1432 aa25.77■■□□□ 1.72
GFAP-213ENST00000588640 TTC21BQ7Z4L5 1316 aa25.76■■□□□ 1.71
GFAP-213ENST00000588640 TTC21AQ8NDW8 1320 aa25.75■■□□□ 1.71
GFAP-213ENST00000588640 SOX12O15370 315 aa25.75■■□□□ 1.71
GFAP-213ENST00000588640 CAMKK2Q96RR4 588 aa25.75■■□□□ 1.71
GFAP-213ENST00000588640 TOM1L2Q6ZVM7 507 aa25.74■■□□□ 1.71
GFAP-213ENST00000588640 ZNF692Q9BU19 519 aaPredicted RBP25.74■■□□□ 1.71
GFAP-213ENST00000588640 TONSLQ96HA7 1378 aa25.73■■□□□ 1.71
GFAP-213ENST00000588640 WDR17Q8IZU2 1322 aa25.72■■□□□ 1.71
GFAP-213ENST00000588640 KCNH5Q8NCM2 988 aa25.71■■□□□ 1.71
GFAP-213ENST00000588640 CARD11Q9BXL7 1154 aa25.71■■□□□ 1.71
GFAP-213ENST00000588640 KAT6BQ8WYB5 2073 aa25.71■■□□□ 1.71
GFAP-213ENST00000588640 CD163L1Q9NR16 1453 aa25.71■■□□□ 1.71
GFAP-213ENST00000588640 FAM208AQ9UK61 1670 aaKnown RBP25.7■■□□□ 1.7
GFAP-213ENST00000588640 AXIN2Q9Y2T1 843 aa25.69■■□□□ 1.7
GFAP-213ENST00000588640 ARHGEF25Q86VW2 580 aa25.68■■□□□ 1.7
GFAP-213ENST00000588640 NHSQ6T4R5 1651 aa25.68■■□□□ 1.7
GFAP-213ENST00000588640 DDB1Q16531 1140 aa25.67■■□□□ 1.7
GFAP-213ENST00000588640 CASZ1Q86V15 1759 aa25.65■■□□□ 1.7
GFAP-213ENST00000588640 C11orf95C9JLR9 678 aaPredicted RBP25.65■■□□□ 1.7
GFAP-213ENST00000588640 CSB-PGBD3P0DP91 1061 aa25.65■■□□□ 1.7
GFAP-213ENST00000588640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.64■■□□□ 1.7
GFAP-213ENST00000588640 RGPD2P0DJD1 1756 aa25.63■■□□□ 1.69
GFAP-213ENST00000588640 TMC1Q8TDI8 760 aa25.62■■□□□ 1.69
GFAP-213ENST00000588640 BTAF1O14981 1849 aa25.62■■□□□ 1.69
GFAP-213ENST00000588640 TNS2Q63HR2 1409 aa25.62■■□□□ 1.69
GFAP-213ENST00000588640 EDC4Q6P2E9 1401 aaKnown RBP25.62■■□□□ 1.69
GFAP-213ENST00000588640 USP31Q70CQ4 1352 aa25.61■■□□□ 1.69
GFAP-213ENST00000588640 KIF20BQ96Q89 1820 aa25.6■■□□□ 1.69
GFAP-213ENST00000588640 CDCA7Q9BWT1 371 aaPredicted RBP25.6■■□□□ 1.69
GFAP-213ENST00000588640 A0A1W2PP64 1363 aa25.59■■□□□ 1.69
GFAP-213ENST00000588640 CCDC7Q96M83 1385 aa25.59■■□□□ 1.69
GFAP-213ENST00000588640 NBPF14Q5TI25 921 aa25.59■■□□□ 1.69
GFAP-213ENST00000588640 NME9Q86XW9 330 aa25.59■■□□□ 1.69
GFAP-213ENST00000588640 CARD10Q9BWT7 1032 aa25.59■■□□□ 1.69
GFAP-213ENST00000588640 HDGFL2Q7Z4V5 671 aaPredicted RBP25.58■■□□□ 1.69
GFAP-213ENST00000588640 BCL9O00512 1426 aa25.55■■□□□ 1.68
GFAP-213ENST00000588640 MARCH10Q8NA82 808 aaPredicted RBP25.55■■□□□ 1.68
GFAP-213ENST00000588640 SLC12A5Q9H2X9 1139 aa25.54■■□□□ 1.68
GFAP-213ENST00000588640 ERBB3P21860 1342 aa25.54■■□□□ 1.68
GFAP-213ENST00000588640 TERF2IPQ9NYB0 399 aa25.53■■□□□ 1.68
GFAP-213ENST00000588640 SHANK3Q9BYB0 1731 aa25.53■■□□□ 1.68
GFAP-213ENST00000588640 PTF1AQ7RTS3 328 aa25.52■■□□□ 1.68
GFAP-213ENST00000588640 BCL11BQ9C0K0 894 aaPredicted RBP25.52■■□□□ 1.68
GFAP-213ENST00000588640 DOT1LQ8TEK3 1739 aa25.51■■□□□ 1.68
GFAP-213ENST00000588640 PLSCR1O15162 318 aa25.5■■□□□ 1.67
GFAP-213ENST00000588640 MYOM1P52179 1685 aa25.5■■□□□ 1.67
GFAP-213ENST00000588640 NINLQ9Y2I6 1382 aa25.5■■□□□ 1.67
GFAP-213ENST00000588640 EXOC5O00471 708 aa25.49■■□□□ 1.67
GFAP-213ENST00000588640 NLRP2Q9NX02 1062 aa25.49■■□□□ 1.67
GFAP-213ENST00000588640 ANO8Q9HCE9 1232 aaPredicted RBP25.47■■□□□ 1.67
GFAP-213ENST00000588640 PAPPAQ13219 1627 aa25.47■■□□□ 1.67
GFAP-213ENST00000588640 TUBGCP6Q96RT7 1819 aa25.45■■□□□ 1.66
GFAP-213ENST00000588640 ST20-MTHFSA0A0A6YYL1 179 aa25.45■■□□□ 1.66
GFAP-213ENST00000588640 ANKRD24Q8TF21 1146 aa25.45■■□□□ 1.66
GFAP-213ENST00000588640 PUS7Q96PZ0 661 aaKnown RBP25.45■■□□□ 1.66
GFAP-213ENST00000588640 TESK2Q96S53 571 aa25.45■■□□□ 1.66
GFAP-213ENST00000588640 SPON1Q9HCB6 807 aa25.44■■□□□ 1.66
GFAP-213ENST00000588640 QSER1Q2KHR3 1735 aa25.43■■□□□ 1.66
GFAP-213ENST00000588640 IL2RBP14784 551 aa25.43■■□□□ 1.66
GFAP-213ENST00000588640 PPP1R1BQ9UD71 204 aaPredicted RBP25.43■■□□□ 1.66
GFAP-213ENST00000588640 KCNQ2O43526 872 aa25.41■■□□□ 1.66
GFAP-213ENST00000588640 ANKRD36BQ8N2N9 1353 aa25.4■■□□□ 1.66
GFAP-213ENST00000588640 USP47Q96K76 1375 aa25.4■■□□□ 1.66
GFAP-213ENST00000588640 LY75O60449 1722 aa25.4■■□□□ 1.66
GFAP-213ENST00000588640 ACSBG1Q96GR2 724 aa25.39■■□□□ 1.66
GFAP-213ENST00000588640 TRIM26Q12899 539 aaPredicted RBP25.38■■□□□ 1.65
GFAP-213ENST00000588640 TXNRD1Q16881 649 aa25.38■■□□□ 1.65
GFAP-213ENST00000588640 PROM2Q8N271 834 aa25.38■■□□□ 1.65
GFAP-213ENST00000588640 COG3Q96JB2 828 aa25.38■■□□□ 1.65
GFAP-213ENST00000588640 LTV1Q96GA3 475 aaPredicted RBP25.36■■□□□ 1.65
GFAP-213ENST00000588640 SLC24A1O60721 1099 aa25.35■■□□□ 1.65
GFAP-213ENST00000588640 IP6K1Q92551 441 aa25.35■■□□□ 1.65
GFAP-213ENST00000588640 STK32BQ9NY57 414 aa25.35■■□□□ 1.65
GFAP-213ENST00000588640 PDGFDQ9GZP0 370 aaPredicted RBP25.34■■□□□ 1.65
GFAP-213ENST00000588640 ANKRD26Q9UPS8 1709 aa25.34■■□□□ 1.65
GFAP-213ENST00000588640 MAP3K19Q56UN5 1328 aa25.34■■□□□ 1.65
GFAP-213ENST00000588640 MAP2P11137 1827 aaKnown RBP25.33■■□□□ 1.64
GFAP-213ENST00000588640 RTL1A6NKG5 1358 aa25.32■■□□□ 1.64
GFAP-213ENST00000588640 TMF1P82094 1093 aa25.32■■□□□ 1.64
GFAP-213ENST00000588640 CHD4Q14839 1912 aa25.31■■□□□ 1.64
GFAP-213ENST00000588640 ZBTB7AO95365 584 aa25.31■■□□□ 1.64
GFAP-213ENST00000588640 MEGF6O75095 1541 aa25.31■■□□□ 1.64
GFAP-213ENST00000588640 HOXC9P31274 260 aa25.3■■□□□ 1.64
GFAP-213ENST00000588640 AMPHP49418 695 aa25.3■■□□□ 1.64
GFAP-213ENST00000588640 SLC15A2Q16348 729 aa25.3■■□□□ 1.64
GFAP-213ENST00000588640 ITGB4P16144 1822 aa25.3■■□□□ 1.64
GFAP-213ENST00000588640 FBLN1P23142 703 aa25.28■■□□□ 1.64
GFAP-213ENST00000588640 SMG6Q86US8 1419 aaKnown RBP25.28■■□□□ 1.64
GFAP-213ENST00000588640 COL24A1Q17RW2 1714 aa25.27■■□□□ 1.64
GFAP-213ENST00000588640 DDX54Q8TDD1 881 aaKnown RBP25.27■■□□□ 1.64
GFAP-213ENST00000588640 TAF1LQ8IZX4 1826 aa25.27■■□□□ 1.64
GFAP-213ENST00000588640 C5P01031 1676 aa25.26■■□□□ 1.63
GFAP-213ENST00000588640 PKD1L3Q7Z443 1732 aa25.26■■□□□ 1.63
GFAP-213ENST00000588640 GGNBP2Q9H3C7 697 aa25.25■■□□□ 1.63
GFAP-213ENST00000588640 TOGARAM1Q9Y4F4 1720 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms