RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 KIAA0232Q92628 1395 aa30.25■■■□□ 2.43
ACTN4-210ENST00000588618 DIAPH1O60610 1272 aaKnown RBP30.25■■■□□ 2.43
ACTN4-210ENST00000588618 NUDCQ9Y266 331 aa30.25■■■□□ 2.43
ACTN4-210ENST00000588618 CPDO75976 1380 aa30.24■■■□□ 2.43
ACTN4-210ENST00000588618 PRDM11Q9NQV5 511 aa30.24■■■□□ 2.43
ACTN4-210ENST00000588618 IP6K1Q92551 441 aa30.23■■■□□ 2.43
ACTN4-210ENST00000588618 IL13P35225 146 aa30.22■■■□□ 2.43
ACTN4-210ENST00000588618 ADAMTS8Q9UP79 889 aa30.22■■■□□ 2.43
ACTN4-210ENST00000588618 EIF4A2Q14240 407 aaKnown RBP30.21■■■□□ 2.43
ACTN4-210ENST00000588618 RGPD1P0DJD0 1748 aa30.21■■■□□ 2.43
ACTN4-210ENST00000588618 NUTM2BA6NNL0 878 aaPredicted RBP30.2■■■□□ 2.43
ACTN4-210ENST00000588618 NUTM2EB1AL46 878 aaPredicted RBP30.2■■■□□ 2.43
ACTN4-210ENST00000588618 NUTM2AQ8IVF1 878 aaPredicted RBP30.2■■■□□ 2.43
ACTN4-210ENST00000588618 AXIN2Q9Y2T1 843 aa30.19■■■□□ 2.42
ACTN4-210ENST00000588618 LMO7Q8WWI1 1683 aa30.18■■■□□ 2.42
ACTN4-210ENST00000588618 U2SURPO15042 1029 aaKnown RBP30.18■■■□□ 2.42
ACTN4-210ENST00000588618 CHRNA2Q15822 529 aa30.18■■■□□ 2.42
ACTN4-210ENST00000588618 FBXO41Q8TF61 875 aa30.18■■■□□ 2.42
ACTN4-210ENST00000588618 RGPD2P0DJD1 1756 aa30.17■■■□□ 2.42
ACTN4-210ENST00000588618 SPATA31A6Q5VVP1 1343 aa30.17■■■□□ 2.42
ACTN4-210ENST00000588618 BLMP54132 1417 aaPredicted RBP30.17■■■□□ 2.42
ACTN4-210ENST00000588618 ABCC6O95255 1503 aa30.17■■■□□ 2.42
ACTN4-210ENST00000588618 ADAMTS2O95450 1211 aa30.15■■■□□ 2.42
ACTN4-210ENST00000588618 LTV1Q96GA3 475 aaPredicted RBP30.15■■■□□ 2.42
ACTN4-210ENST00000588618 U2AF1L5P0DN76 240 aaPredicted RBP30.13■■■□□ 2.41
ACTN4-210ENST00000588618 U2AF1Q01081 240 aaKnown RBP eCLIP30.13■■■□□ 2.41
ACTN4-210ENST00000588618 YTHDC1Q96MU7 727 aaKnown RBP30.13■■■□□ 2.41
ACTN4-210ENST00000588618 CAMTA1Q9Y6Y1 1673 aa30.12■■■□□ 2.41
ACTN4-210ENST00000588618 FAM83GA6ND36 823 aa30.1■■■□□ 2.41
ACTN4-210ENST00000588618 ANKRD24Q8TF21 1146 aa30.1■■■□□ 2.41
ACTN4-210ENST00000588618 COL14A1Q05707 1796 aaKnown RBP30.08■■■□□ 2.41
ACTN4-210ENST00000588618 CSB-PGBD3P0DP91 1061 aa30.08■■■□□ 2.41
ACTN4-210ENST00000588618 ERBB3P21860 1342 aa30.07■■■□□ 2.4
ACTN4-210ENST00000588618 CCDC146Q8IYE0 955 aa30.07■■■□□ 2.4
ACTN4-210ENST00000588618 EYA1Q99502 592 aa30.07■■■□□ 2.4
ACTN4-210ENST00000588618 SENP3-EIF4A1A0A087X0R7 540 aa30.06■■■□□ 2.4
ACTN4-210ENST00000588618 HMOX1P09601 288 aa30.05■■■□□ 2.4
ACTN4-210ENST00000588618 AEBP1Q8IUX7 1158 aa30.05■■■□□ 2.4
ACTN4-210ENST00000588618 LRP6O75581 1613 aa30.05■■■□□ 2.4
ACTN4-210ENST00000588618 IGSF1Q8N6C5 1336 aa30.05■■■□□ 2.4
ACTN4-210ENST00000588618 PLCH1Q4KWH8 1693 aa30.05■■■□□ 2.4
ACTN4-210ENST00000588618 EVA1CP58658 441 aa30.05■■■□□ 2.4
ACTN4-210ENST00000588618 COL5A2P05997 1499 aaPredicted RBP30.04■■■□□ 2.4
ACTN4-210ENST00000588618 MEX3CQ5U5Q3 659 aaKnown RBP30.04■■■□□ 2.4
ACTN4-210ENST00000588618 RSPH6AQ9H0K4 717 aa30.04■■■□□ 2.4
ACTN4-210ENST00000588618 PNNQ9H307 717 aaKnown RBP30.04■■■□□ 2.4
ACTN4-210ENST00000588618 BTG4Q9NY30 223 aa30.04■■■□□ 2.4
ACTN4-210ENST00000588618 FAM208AQ9UK61 1670 aaKnown RBP30.03■■■□□ 2.4
ACTN4-210ENST00000588618 NBPF6Q5VWK0 638 aa30.02■■■□□ 2.4
ACTN4-210ENST00000588618 NBPF4Q96M43 638 aa30.02■■■□□ 2.4
ACTN4-210ENST00000588618 PLEKHF1Q96S99 279 aa30.02■■■□□ 2.4
ACTN4-210ENST00000588618 SULT6B1Q6IMI4 303 aa30.01■■■□□ 2.39
ACTN4-210ENST00000588618 STRN4Q9NRL3 753 aa30.01■■■□□ 2.39
ACTN4-210ENST00000588618 KDRP35968 1356 aa30.01■■■□□ 2.39
ACTN4-210ENST00000588618 NEFMP07197 916 aa30■■■□□ 2.39
ACTN4-210ENST00000588618 C8orf37Q96NL8 207 aa30■■■□□ 2.39
ACTN4-210ENST00000588618 NCAPD2Q15021 1401 aa30■■■□□ 2.39
ACTN4-210ENST00000588618 FCHSD2O94868 740 aa29.99■■■□□ 2.39
ACTN4-210ENST00000588618 HNRNPUQ00839 825 aaKnown RBP eCLIP29.99■■■□□ 2.392e-6■■■■□ 21.2
ACTN4-210ENST00000588618 USHBP1Q8N6Y0 703 aa29.99■■■□□ 2.39
ACTN4-210ENST00000588618 NLRP2Q9NX02 1062 aa29.99■■■□□ 2.39
ACTN4-210ENST00000588618 NRAPQ86VF7 1730 aa29.99■■■□□ 2.39
ACTN4-210ENST00000588618 NGLY1Q96IV0 654 aa29.99■■■□□ 2.39
ACTN4-210ENST00000588618 WDR17Q8IZU2 1322 aa29.98■■■□□ 2.39
ACTN4-210ENST00000588618 PRKAR2BP31323 418 aa29.97■■■□□ 2.39
ACTN4-210ENST00000588618 TOM1L2Q6ZVM7 507 aa29.97■■■□□ 2.39
ACTN4-210ENST00000588618 MAPK8IP3Q9UPT6 1336 aa29.96■■■□□ 2.39
ACTN4-210ENST00000588618 RUNDC1Q96C34 613 aa29.96■■■□□ 2.39
ACTN4-210ENST00000588618 NWD2Q9ULI1 1742 aa29.94■■■□□ 2.38
ACTN4-210ENST00000588618 APAF1O14727 1248 aa29.93■■■□□ 2.38
ACTN4-210ENST00000588618 SLIT2O94813 1529 aa29.93■■■□□ 2.38
ACTN4-210ENST00000588618 PHACTR3Q96KR7 559 aa29.93■■■□□ 2.38
ACTN4-210ENST00000588618 LARP1Q6PKG0 1096 aaKnown RBP29.91■■■□□ 2.38
ACTN4-210ENST00000588618 TCP11L2Q8N4U5 519 aa29.9■■■□□ 2.38
ACTN4-210ENST00000588618 DLG5Q8TDM6 1919 aa29.89■■■□□ 2.38
ACTN4-210ENST00000588618 CRB1P82279 1406 aa29.89■■■□□ 2.37
ACTN4-210ENST00000588618 SALL2Q9Y467 1007 aaPredicted RBP29.88■■■□□ 2.37
ACTN4-210ENST00000588618 UNC5CLQ8IV45 518 aa29.87■■■□□ 2.37
ACTN4-210ENST00000588618 CARD10Q9BWT7 1032 aa29.87■■■□□ 2.37
ACTN4-210ENST00000588618 RRP7AQ9Y3A4 280 aaKnown RBP29.87■■■□□ 2.37
ACTN4-210ENST00000588618 FNBP4Q8N3X1 1017 aaPredicted RBP29.86■■■□□ 2.37
ACTN4-210ENST00000588618 RAPGEF4Q8WZA2 1011 aa29.85■■■□□ 2.37
ACTN4-210ENST00000588618 USP35Q9P2H5 1018 aa29.85■■■□□ 2.37
ACTN4-210ENST00000588618 USP21Q9UK80 565 aa29.85■■■□□ 2.37
ACTN4-210ENST00000588618 CCDC9Q9Y3X0 531 aaKnown RBP29.85■■■□□ 2.37
ACTN4-210ENST00000588618 ZBED9Q6R2W3 1325 aa29.84■■■□□ 2.37
ACTN4-210ENST00000588618 BCL9LQ86UU0 1499 aa29.83■■■□□ 2.37
ACTN4-210ENST00000588618 MEGF6O75095 1541 aa29.83■■■□□ 2.37
ACTN4-210ENST00000588618 TMPOP42166 694 aaKnown RBP29.82■■■□□ 2.36
ACTN4-210ENST00000588618 NEUROD2Q15784 382 aa29.81■■■□□ 2.36
ACTN4-210ENST00000588618 AFF2P51816 1311 aa29.81■■■□□ 2.36
ACTN4-210ENST00000588618 TATP17735 454 aaPredicted RBP29.8■■■□□ 2.36
ACTN4-210ENST00000588618 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.8■■■□□ 2.36
ACTN4-210ENST00000588618 NFE2L2Q16236 605 aa29.78■■■□□ 2.36
ACTN4-210ENST00000588618 MTHFSDQ2M296 383 aaKnown RBP29.78■■■□□ 2.36
ACTN4-210ENST00000588618 WNK3Q9BYP7 1800 aa29.78■■■□□ 2.36
ACTN4-210ENST00000588618 PHF23Q9BUL5 403 aaPredicted RBP29.77■■■□□ 2.36
ACTN4-210ENST00000588618 PARP4Q9UKK3 1724 aaKnown RBP29.77■■■□□ 2.36
ACTN4-210ENST00000588618 ZNF521Q96K83 1311 aa29.77■■■□□ 2.36
ACTN4-210ENST00000588618 NGEFQ8N5V2 710 aa29.76■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms