RNA–Protein interactions for RNA: ENST00000588439.1

TYROBP-208, Transcript of TYRO protein tyrosine kinase binding protein, human

TSL 2

Gene TYROBP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TYROBP-208	ENST00000588439	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.65	■■■□□ 2.02
TYROBP-208	ENST00000588439	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.64	■■■□□ 2.02
TYROBP-208	ENST00000588439	HOXC9	P31274	260 aa		27.64	■■■□□ 2.02
TYROBP-208	ENST00000588439	AXIN2	Q9Y2T1	843 aa		27.64	■■■□□ 2.02
TYROBP-208	ENST00000588439	BLM	P54132	1417 aa	Predicted RBP	27.64	■■■□□ 2.02
TYROBP-208	ENST00000588439	MEX3C	Q5U5Q3	659 aa	Known RBP	27.63	■■■□□ 2.01
TYROBP-208	ENST00000588439	C8orf37	Q96NL8	207 aa		27.63	■■■□□ 2.01
TYROBP-208	ENST00000588439	NRAP	Q86VF7	1730 aa		27.62	■■■□□ 2.01
TYROBP-208	ENST00000588439	AMPH	P49418	695 aa		27.62	■■■□□ 2.01
TYROBP-208	ENST00000588439	INSR	P06213	1382 aa		27.61	■■■□□ 2.01
TYROBP-208	ENST00000588439	RGPD5	Q99666	1765 aa		27.61	■■■□□ 2.01
TYROBP-208	ENST00000588439	ZBTB7C	A1YPR0	619 aa		27.61	■■■□□ 2.01
TYROBP-208	ENST00000588439	ANP32C	O43423	234 aa		27.61	■■■□□ 2.01
TYROBP-208	ENST00000588439	MTHFS	P49914	203 aa		27.61	■■■□□ 2.01
TYROBP-208	ENST00000588439	DIEXF	Q68CQ4	756 aa	Known RBP	27.61	■■■□□ 2.01
TYROBP-208	ENST00000588439	NGLY1	Q96IV0	654 aa		27.61	■■■□□ 2.01
TYROBP-208	ENST00000588439	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.61	■■■□□ 2.01
TYROBP-208	ENST00000588439	COL5A2	P05997	1499 aa	Predicted RBP	27.6	■■■□□ 2.01
TYROBP-208	ENST00000588439	BCL9L	Q86UU0	1499 aa		27.6	■■■□□ 2.01
TYROBP-208	ENST00000588439	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.59	■■■□□ 2.01
TYROBP-208	ENST00000588439	BTG4	Q9NY30	223 aa		27.59	■■■□□ 2.01
TYROBP-208	ENST00000588439	HSP90AB2P	Q58FF8	381 aa		27.58	■■■□□ 2.01
TYROBP-208	ENST00000588439	AFF2	P51816	1311 aa		27.57	■■■□□ 2
TYROBP-208	ENST00000588439	COL3A1	P02461	1466 aa	Predicted RBP	27.57	■■■□□ 2
TYROBP-208	ENST00000588439	PPM1G	O15355	546 aa	Predicted RBP	27.56	■■■□□ 2
TYROBP-208	ENST00000588439	ERBB3	P21860	1342 aa		27.55	■■■□□ 2
TYROBP-208	ENST00000588439	UNC5CL	Q8IV45	518 aa		27.54	■■■□□ 2
TYROBP-208	ENST00000588439	ANKRD24	Q8TF21	1146 aa		27.52	■■■□□ 2
TYROBP-208	ENST00000588439	USP21	Q9UK80	565 aa		27.52	■■■□□ 2
TYROBP-208	ENST00000588439	WDR17	Q8IZU2	1322 aa		27.51	■■□□□ 1.99
TYROBP-208	ENST00000588439	FAM208A	Q9UK61	1670 aa	Known RBP	27.51	■■□□□ 1.99
TYROBP-208	ENST00000588439	EIF4A2	Q14240	407 aa	Known RBP	27.49	■■□□□ 1.99
TYROBP-208	ENST00000588439	ATRN	O75882	1429 aa		27.49	■■□□□ 1.99
TYROBP-208	ENST00000588439	IL13	P35225	146 aa		27.47	■■□□□ 1.99
TYROBP-208	ENST00000588439	VPS72	Q15906	364 aa		27.47	■■□□□ 1.99
TYROBP-208	ENST00000588439	LARP1	Q6PKG0	1096 aa	Known RBP	27.47	■■□□□ 1.99
TYROBP-208	ENST00000588439	CFAP53	Q96M91	514 aa		27.47	■■□□□ 1.99
TYROBP-208	ENST00000588439	STRN4	Q9NRL3	753 aa		27.47	■■□□□ 1.99
TYROBP-208	ENST00000588439	RGS17	Q9UGC6	210 aa	Predicted RBP	27.47	■■□□□ 1.99
TYROBP-208	ENST00000588439	CRB1	P82279	1406 aa		27.47	■■□□□ 1.99
TYROBP-208	ENST00000588439	EVA1C	P58658	441 aa		27.46	■■□□□ 1.99
TYROBP-208	ENST00000588439	ZNF772	Q68DY9	489 aa	Predicted RBP	27.46	■■□□□ 1.99
TYROBP-208	ENST00000588439	RGPD1	P0DJD0	1748 aa		27.45	■■□□□ 1.99
TYROBP-208	ENST00000588439	NCAPD2	Q15021	1401 aa		27.45	■■□□□ 1.98
TYROBP-208	ENST00000588439	LTV1	Q96GA3	475 aa	Predicted RBP	27.45	■■□□□ 1.98
TYROBP-208	ENST00000588439	DIAPH1	O60610	1272 aa	Known RBP	27.44	■■□□□ 1.98
TYROBP-208	ENST00000588439	RGPD2	P0DJD1	1756 aa		27.43	■■□□□ 1.98
TYROBP-208	ENST00000588439	TRPC5	Q9UL62	973 aa	Predicted RBP	27.43	■■□□□ 1.98
TYROBP-208	ENST00000588439	SPATA31A5	Q5VU36	1347 aa		27.42	■■□□□ 1.98
TYROBP-208	ENST00000588439	SPATA31A7	Q8IWB4	1347 aa		27.42	■■□□□ 1.98
TYROBP-208	ENST00000588439	CSB-PGBD3	P0DP91	1061 aa		27.42	■■□□□ 1.98
TYROBP-208	ENST00000588439	CARD10	Q9BWT7	1032 aa		27.42	■■□□□ 1.98
TYROBP-208	ENST00000588439	SPATA31A1	Q5TZJ5	1347 aa		27.41	■■□□□ 1.98
TYROBP-208	ENST00000588439	NBPF6	Q5VWK0	638 aa		27.41	■■□□□ 1.98
TYROBP-208	ENST00000588439	NBPF4	Q96M43	638 aa		27.41	■■□□□ 1.98
TYROBP-208	ENST00000588439	IGSF1	Q8N6C5	1336 aa		27.41	■■□□□ 1.98
TYROBP-208	ENST00000588439	TOM1L2	Q6ZVM7	507 aa		27.4	■■□□□ 1.98
TYROBP-208	ENST00000588439	EYA1	Q99502	592 aa		27.4	■■□□□ 1.98
TYROBP-208	ENST00000588439	GLI3	P10071	1580 aa		27.39	■■□□□ 1.98
TYROBP-208	ENST00000588439	CCDC184	Q52MB2	194 aa		27.39	■■□□□ 1.98
TYROBP-208	ENST00000588439	QTRT2	Q9H974	415 aa	Known RBP	27.39	■■□□□ 1.98
TYROBP-208	ENST00000588439	PHF23	Q9BUL5	403 aa	Predicted RBP	27.38	■■□□□ 1.97
TYROBP-208	ENST00000588439	NLRP2	Q9NX02	1062 aa		27.38	■■□□□ 1.97
TYROBP-208	ENST00000588439	GJD4	Q96KN9	370 aa	Predicted RBP	27.37	■■□□□ 1.97
TYROBP-208	ENST00000588439	MIER1	Q8N108	512 aa		27.36	■■□□□ 1.97
TYROBP-208	ENST00000588439	THRAP3	Q9Y2W1	955 aa	Known RBP	27.36	■■□□□ 1.97
TYROBP-208	ENST00000588439	KDR	P35968	1356 aa		27.35	■■□□□ 1.97
TYROBP-208	ENST00000588439	CCER2	I3L3R5	266 aa		27.34	■■□□□ 1.97
TYROBP-208	ENST00000588439	TCP11L2	Q8N4U5	519 aa		27.34	■■□□□ 1.97
TYROBP-208	ENST00000588439	NUDC	Q9Y266	331 aa		27.34	■■□□□ 1.97
TYROBP-208	ENST00000588439	DISP2	A7MBM2	1401 aa		27.33	■■□□□ 1.97
TYROBP-208	ENST00000588439	WNK3	Q9BYP7	1800 aa		27.33	■■□□□ 1.97
TYROBP-208	ENST00000588439	POTEA	Q6S8J7	498 aa		27.33	■■□□□ 1.97
TYROBP-208	ENST00000588439	BARGIN	Q6ZT62	677 aa		27.33	■■□□□ 1.97
TYROBP-208	ENST00000588439	USHBP1	Q8N6Y0	703 aa		27.32	■■□□□ 1.96
TYROBP-208	ENST00000588439	CCDC9	Q9Y3X0	531 aa	Known RBP	27.32	■■□□□ 1.96
TYROBP-208	ENST00000588439	MRS2	Q9HD23	443 aa		27.31	■■□□□ 1.96
TYROBP-208	ENST00000588439	ONECUT3	O60422	494 aa	Predicted RBP	27.3	■■□□□ 1.96
TYROBP-208	ENST00000588439	RBM6	P78332	1123 aa	Known RBP	27.3	■■□□□ 1.96
TYROBP-208	ENST00000588439	USP35	Q9P2H5	1018 aa		27.3	■■□□□ 1.96
TYROBP-208	ENST00000588439	U2SURP	O15042	1029 aa	Known RBP	27.29	■■□□□ 1.96
TYROBP-208	ENST00000588439	PLEKHG2	Q9H7P9	1386 aa		27.29	■■□□□ 1.96
TYROBP-208	ENST00000588439	THSD7A	Q9UPZ6	1657 aa		27.29	■■□□□ 1.96
TYROBP-208	ENST00000588439	SULT6B1	Q6IMI4	303 aa		27.28	■■□□□ 1.96
TYROBP-208	ENST00000588439	AEBP1	Q8IUX7	1158 aa		27.28	■■□□□ 1.96
TYROBP-208	ENST00000588439	MEGF6	O75095	1541 aa		27.27	■■□□□ 1.96
TYROBP-208	ENST00000588439	PNISR	Q8TF01	805 aa	Known RBP	27.27	■■□□□ 1.96
TYROBP-208	ENST00000588439	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.26	■■□□□ 1.95
TYROBP-208	ENST00000588439	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.25	■■□□□ 1.95
TYROBP-208	ENST00000588439	IL2RB	P14784	551 aa		27.25	■■□□□ 1.95
TYROBP-208	ENST00000588439	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.25	■■□□□ 1.95
TYROBP-208	ENST00000588439	OVOS2	A0A0G2JMS6	1433 aa		27.24	■■□□□ 1.95
TYROBP-208	ENST00000588439	PARP4	Q9UKK3	1724 aa	Known RBP	27.24	■■□□□ 1.95
TYROBP-208	ENST00000588439	HMOX1	P09601	288 aa		27.24	■■□□□ 1.95
TYROBP-208	ENST00000588439	RXRB	P28702	533 aa		27.24	■■□□□ 1.95
TYROBP-208	ENST00000588439	FAM98C	Q17RN3	349 aa	Known RBP	27.24	■■□□□ 1.95
TYROBP-208	ENST00000588439	RSPH6A	Q9H0K4	717 aa		27.24	■■□□□ 1.95
TYROBP-208	ENST00000588439	FCHSD2	O94868	740 aa		27.23	■■□□□ 1.95
TYROBP-208	ENST00000588439	LRRC37A3	O60309	1634 aa		27.21	■■□□□ 1.95
TYROBP-208	ENST00000588439	WDR43	Q15061	677 aa	Known RBP eCLIP	27.21	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms