RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 WDR17Q8IZU2 1322 aa20■□□□□ 0.79
CLPTM1-208ENST00000588274 ABCC6O95255 1503 aa19.99■□□□□ 0.79
CLPTM1-208ENST00000588274 L3MBTL2Q969R5 705 aa19.99■□□□□ 0.79
CLPTM1-208ENST00000588274 MON2Q7Z3U7 1717 aa19.99■□□□□ 0.79
CLPTM1-208ENST00000588274 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
CLPTM1-208ENST00000588274 C11orf95C9JLR9 678 aaPredicted RBP19.97■□□□□ 0.79
CLPTM1-208ENST00000588274 PLSCR1O15162 318 aa19.97■□□□□ 0.79
CLPTM1-208ENST00000588274 MARCH10Q8NA82 808 aaPredicted RBP19.97■□□□□ 0.79
CLPTM1-208ENST00000588274 NBPF14Q5TI25 921 aa19.96■□□□□ 0.79
CLPTM1-208ENST00000588274 PROM2Q8N271 834 aa19.96■□□□□ 0.79
CLPTM1-208ENST00000588274 TTC21BQ7Z4L5 1316 aa19.96■□□□□ 0.79
CLPTM1-208ENST00000588274 NINLQ9Y2I6 1382 aa19.95■□□□□ 0.79
CLPTM1-208ENST00000588274 CD163L1Q9NR16 1453 aa19.95■□□□□ 0.78
CLPTM1-208ENST00000588274 DDB1Q16531 1140 aa19.95■□□□□ 0.78
CLPTM1-208ENST00000588274 EVC2Q86UK5 1308 aa19.95■□□□□ 0.78
CLPTM1-208ENST00000588274 KCNQ2O43526 872 aa19.94■□□□□ 0.78
CLPTM1-208ENST00000588274 TOM1L2Q6ZVM7 507 aa19.94■□□□□ 0.78
CLPTM1-208ENST00000588274 BCL11BQ9C0K0 894 aaPredicted RBP19.94■□□□□ 0.78
CLPTM1-208ENST00000588274 PDGFDQ9GZP0 370 aaPredicted RBP19.94■□□□□ 0.78
CLPTM1-208ENST00000588274 UTRNP46939 3433 aa19.93■□□□□ 0.78
CLPTM1-208ENST00000588274 ZBTB7CA1YPR0 619 aa19.93■□□□□ 0.78
CLPTM1-208ENST00000588274 SPON1Q9HCB6 807 aa19.93■□□□□ 0.78
CLPTM1-208ENST00000588274 MYOM1P52179 1685 aa19.93■□□□□ 0.78
CLPTM1-208ENST00000588274 TNS2Q63HR2 1409 aa19.93■□□□□ 0.78
CLPTM1-208ENST00000588274 PAPPAQ13219 1627 aa19.92■□□□□ 0.78
CLPTM1-208ENST00000588274 NHSQ6T4R5 1651 aa19.92■□□□□ 0.78
CLPTM1-208ENST00000588274 TTC21AQ8NDW8 1320 aa19.91■□□□□ 0.78
CLPTM1-208ENST00000588274 SBNO2Q9Y2G9 1366 aa19.91■□□□□ 0.78
CLPTM1-208ENST00000588274 CARD10Q9BWT7 1032 aa19.9■□□□□ 0.78
CLPTM1-208ENST00000588274 ROCK2O75116 1388 aaKnown RBP19.9■□□□□ 0.78
CLPTM1-208ENST00000588274 USP31Q70CQ4 1352 aa19.89■□□□□ 0.77
CLPTM1-208ENST00000588274 KCNH5Q8NCM2 988 aa19.89■□□□□ 0.77
CLPTM1-208ENST00000588274 SIN3AQ96ST3 1273 aa19.89■□□□□ 0.77
CLPTM1-208ENST00000588274 CDCA7Q9BWT1 371 aaPredicted RBP19.89■□□□□ 0.77
CLPTM1-208ENST00000588274 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
CLPTM1-208ENST00000588274 KTN1Q86UP2 1357 aaKnown RBP19.87■□□□□ 0.77
CLPTM1-208ENST00000588274 CCDC7Q96M83 1385 aa19.87■□□□□ 0.77
CLPTM1-208ENST00000588274 PTGER2P43116 358 aa19.87■□□□□ 0.77
CLPTM1-208ENST00000588274 LTN1O94822 1766 aa19.85■□□□□ 0.77
CLPTM1-208ENST00000588274 ERBB3P21860 1342 aa19.85■□□□□ 0.77
CLPTM1-208ENST00000588274 SOX12O15370 315 aa19.85■□□□□ 0.77
CLPTM1-208ENST00000588274 YY1P25490 414 aa19.85■□□□□ 0.77
CLPTM1-208ENST00000588274 TXNRD1Q16881 649 aa19.83■□□□□ 0.77
CLPTM1-208ENST00000588274 PPP1R1BQ9UD71 204 aaPredicted RBP19.83■□□□□ 0.77
CLPTM1-208ENST00000588274 SGIP1Q9BQI5 828 aa19.82■□□□□ 0.76
CLPTM1-208ENST00000588274 ZBTB7AO95365 584 aa19.81■□□□□ 0.76
CLPTM1-208ENST00000588274 BTAF1O14981 1849 aa19.81■□□□□ 0.76
CLPTM1-208ENST00000588274 CSB-PGBD3P0DP91 1061 aa19.8■□□□□ 0.76
CLPTM1-208ENST00000588274 NME9Q86XW9 330 aa19.8■□□□□ 0.76
CLPTM1-208ENST00000588274 SLC15A2Q16348 729 aa19.79■□□□□ 0.76
CLPTM1-208ENST00000588274 EXOC5O00471 708 aa19.78■□□□□ 0.76
CLPTM1-208ENST00000588274 EDC4Q6P2E9 1401 aaKnown RBP19.77■□□□□ 0.76
CLPTM1-208ENST00000588274 A0A1W2PP64 1363 aa19.77■□□□□ 0.76
CLPTM1-208ENST00000588274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.76■□□□□ 0.75
CLPTM1-208ENST00000588274 FAM208AQ9UK61 1670 aaKnown RBP19.75■□□□□ 0.75
CLPTM1-208ENST00000588274 STK32BQ9NY57 414 aa19.75■□□□□ 0.75
CLPTM1-208ENST00000588274 COL24A1Q17RW2 1714 aa19.75■□□□□ 0.75
CLPTM1-208ENST00000588274 SHANK3Q9BYB0 1731 aa19.74■□□□□ 0.75
CLPTM1-208ENST00000588274 NEUROD1Q13562 356 aa19.74■□□□□ 0.75
CLPTM1-208ENST00000588274 ATF5Q9Y2D1 282 aaPredicted RBP19.74■□□□□ 0.75
CLPTM1-208ENST00000588274 QSER1Q2KHR3 1735 aa19.73■□□□□ 0.75
CLPTM1-208ENST00000588274 IL2RBP14784 551 aa19.73■□□□□ 0.75
CLPTM1-208ENST00000588274 ZNF827Q17R98 1081 aa19.73■□□□□ 0.75
CLPTM1-208ENST00000588274 ACSBG1Q96GR2 724 aa19.73■□□□□ 0.75
CLPTM1-208ENST00000588274 FHDC1Q9C0D6 1143 aaPredicted RBP19.73■□□□□ 0.75
CLPTM1-208ENST00000588274 GOLGB1Q14789 3259 aaKnown RBP19.73■□□□□ 0.75
CLPTM1-208ENST00000588274 ANKRD24Q8TF21 1146 aa19.72■□□□□ 0.75
CLPTM1-208ENST00000588274 MTFR1LQ9H019 292 aa19.72■□□□□ 0.75
CLPTM1-208ENST00000588274 SLC12A5Q9H2X9 1139 aa19.72■□□□□ 0.75
CLPTM1-208ENST00000588274 LRRC4BQ9NT99 713 aa19.72■□□□□ 0.75
CLPTM1-208ENST00000588274 MAP3K5Q99683 1374 aa19.71■□□□□ 0.75
CLPTM1-208ENST00000588274 SYT17Q9BSW7 474 aa19.71■□□□□ 0.75
CLPTM1-208ENST00000588274 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
CLPTM1-208ENST00000588274 TUBGCP6Q96RT7 1819 aa19.71■□□□□ 0.75
CLPTM1-208ENST00000588274 DOT1LQ8TEK3 1739 aa19.69■□□□□ 0.74
CLPTM1-208ENST00000588274 CARD11Q9BXL7 1154 aa19.69■□□□□ 0.74
CLPTM1-208ENST00000588274 NSD2O96028 1365 aa19.69■□□□□ 0.74
CLPTM1-208ENST00000588274 AKT1S1Q96B36 256 aa19.67■□□□□ 0.74
CLPTM1-208ENST00000588274 TESK2Q96S53 571 aa19.67■□□□□ 0.74
CLPTM1-208ENST00000588274 LY75O60449 1722 aa19.67■□□□□ 0.74
CLPTM1-208ENST00000588274 ZNF784Q8NCA9 323 aaPredicted RBP19.66■□□□□ 0.74
CLPTM1-208ENST00000588274 PUS7Q96PZ0 661 aaKnown RBP19.66■□□□□ 0.74
CLPTM1-208ENST00000588274 MEGF6O75095 1541 aa19.66■□□□□ 0.74
CLPTM1-208ENST00000588274 RGPD2P0DJD1 1756 aa19.65■□□□□ 0.74
CLPTM1-208ENST00000588274 HDGFL2Q7Z4V5 671 aaPredicted RBP19.65■□□□□ 0.74
CLPTM1-208ENST00000588274 TMC1Q8TDI8 760 aa19.65■□□□□ 0.74
CLPTM1-208ENST00000588274 IP6K1Q92551 441 aa19.65■□□□□ 0.74
CLPTM1-208ENST00000588274 MAP3K19Q56UN5 1328 aa19.63■□□□□ 0.73
CLPTM1-208ENST00000588274 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
CLPTM1-208ENST00000588274 ARXQ96QS3 562 aa19.63■□□□□ 0.73
CLPTM1-208ENST00000588274 CHD4Q14839 1912 aa19.63■□□□□ 0.73
CLPTM1-208ENST00000588274 PNPLA7Q6ZV29 1317 aa19.62■□□□□ 0.73
CLPTM1-208ENST00000588274 TERF2IPQ9NYB0 399 aa19.62■□□□□ 0.73
CLPTM1-208ENST00000588274 ANKRD36BQ8N2N9 1353 aa19.61■□□□□ 0.73
CLPTM1-208ENST00000588274 FBLN1P23142 703 aa19.59■□□□□ 0.73
CLPTM1-208ENST00000588274 HOXC9P31274 260 aa19.59■□□□□ 0.73
CLPTM1-208ENST00000588274 SLC27A3Q5K4L6 730 aa19.59■□□□□ 0.73
CLPTM1-208ENST00000588274 RTL1A6NKG5 1358 aa19.58■□□□□ 0.73
CLPTM1-208ENST00000588274 KCNQ4P56696 695 aa19.57■□□□□ 0.72
CLPTM1-208ENST00000588274 DDX54Q8TDD1 881 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms