RNA–Protein interactions for RNA: ENST00000588242.2

GCDH-207, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-207ENST00000588242 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
GCDH-207ENST00000588242 BTG4Q9NY30 223 aa17.2■□□□□ 0.34
GCDH-207ENST00000588242 USP21Q9UK80 565 aa17.2■□□□□ 0.34
GCDH-207ENST00000588242 LTN1O94822 1766 aa17.2■□□□□ 0.34
GCDH-207ENST00000588242 AMPHP49418 695 aa17.19■□□□□ 0.34
GCDH-207ENST00000588242 LMO7Q8WWI1 1683 aa17.19■□□□□ 0.34
GCDH-207ENST00000588242 NWD2Q9ULI1 1742 aa17.18■□□□□ 0.34
GCDH-207ENST00000588242 ABCC6O95255 1503 aa17.18■□□□□ 0.34
GCDH-207ENST00000588242 ZNF772Q68DY9 489 aaPredicted RBP17.18■□□□□ 0.34
GCDH-207ENST00000588242 COL18A1P39060 1754 aa17.17■□□□□ 0.34
GCDH-207ENST00000588242 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
GCDH-207ENST00000588242 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
GCDH-207ENST00000588242 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
GCDH-207ENST00000588242 IP6K1Q92551 441 aa17.17■□□□□ 0.34
GCDH-207ENST00000588242 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
GCDH-207ENST00000588242 BCL9LQ86UU0 1499 aa17.17■□□□□ 0.34
GCDH-207ENST00000588242 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
GCDH-207ENST00000588242 PPM1GO15355 546 aaPredicted RBP17.16■□□□□ 0.34
GCDH-207ENST00000588242 HOXC9P31274 260 aa17.16■□□□□ 0.34
GCDH-207ENST00000588242 EVA1CP58658 441 aa17.16■□□□□ 0.34
GCDH-207ENST00000588242 CCDC184Q52MB2 194 aa17.16■□□□□ 0.34
GCDH-207ENST00000588242 STRN4Q9NRL3 753 aa17.16■□□□□ 0.34
GCDH-207ENST00000588242 POLKQ9UBT6 870 aa17.16■□□□□ 0.34
GCDH-207ENST00000588242 AXIN2Q9Y2T1 843 aa17.16■□□□□ 0.34
GCDH-207ENST00000588242 NRAPQ86VF7 1730 aa17.16■□□□□ 0.34
GCDH-207ENST00000588242 BLMP54132 1417 aaPredicted RBP17.15■□□□□ 0.34
GCDH-207ENST00000588242 COL5A2P05997 1499 aaPredicted RBP17.15■□□□□ 0.34
GCDH-207ENST00000588242 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.15■□□□□ 0.34
GCDH-207ENST00000588242 FLT4P35916 1363 aa17.15■□□□□ 0.34
GCDH-207ENST00000588242 PEAK1Q9H792 1746 aa17.14■□□□□ 0.33
GCDH-207ENST00000588242 RGS17Q9UGC6 210 aaPredicted RBP17.14■□□□□ 0.33
GCDH-207ENST00000588242 MAP2P11137 1827 aaKnown RBP17.13■□□□□ 0.33
GCDH-207ENST00000588242 TRPC5Q9UL62 973 aaPredicted RBP17.13■□□□□ 0.33
GCDH-207ENST00000588242 SMG6Q86US8 1419 aaKnown RBP17.13■□□□□ 0.33
GCDH-207ENST00000588242 CSB-PGBD3P0DP91 1061 aa17.12■□□□□ 0.33
GCDH-207ENST00000588242 HNRNPUQ00839 825 aaKnown RBP eCLIP17.12■□□□□ 0.33
GCDH-207ENST00000588242 QTRT2Q9H974 415 aaKnown RBP17.12■□□□□ 0.33
GCDH-207ENST00000588242 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
GCDH-207ENST00000588242 INSRP06213 1382 aa17.12■□□□□ 0.33
GCDH-207ENST00000588242 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
GCDH-207ENST00000588242 ATRNO75882 1429 aa17.12■□□□□ 0.33
GCDH-207ENST00000588242 MTHFSP49914 203 aa17.11■□□□□ 0.33
GCDH-207ENST00000588242 VPS72Q15906 364 aa17.11■□□□□ 0.33
GCDH-207ENST00000588242 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
GCDH-207ENST00000588242 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
GCDH-207ENST00000588242 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
GCDH-207ENST00000588242 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
GCDH-207ENST00000588242 ERBB3P21860 1342 aa17.11■□□□□ 0.33
GCDH-207ENST00000588242 WDR17Q8IZU2 1322 aa17.11■□□□□ 0.33
GCDH-207ENST00000588242 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
GCDH-207ENST00000588242 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
GCDH-207ENST00000588242 GTF3C3Q9Y5Q9 886 aa17.1■□□□□ 0.33
GCDH-207ENST00000588242 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
GCDH-207ENST00000588242 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
GCDH-207ENST00000588242 TOM1L2Q6ZVM7 507 aa17.09■□□□□ 0.33
GCDH-207ENST00000588242 CRB1P82279 1406 aa17.08■□□□□ 0.32
GCDH-207ENST00000588242 SPATA31A5Q5VU36 1347 aa17.08■□□□□ 0.32
GCDH-207ENST00000588242 SPATA31A7Q8IWB4 1347 aa17.08■□□□□ 0.32
GCDH-207ENST00000588242 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.32
GCDH-207ENST00000588242 SPATA31A1Q5TZJ5 1347 aa17.06■□□□□ 0.32
GCDH-207ENST00000588242 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
GCDH-207ENST00000588242 PNISRQ8TF01 805 aaKnown RBP17.06■□□□□ 0.32
GCDH-207ENST00000588242 NLRP2Q9NX02 1062 aa17.06■□□□□ 0.32
GCDH-207ENST00000588242 USP35Q9P2H5 1018 aa17.06■□□□□ 0.32
GCDH-207ENST00000588242 FAM208AQ9UK61 1670 aaKnown RBP17.05■□□□□ 0.32
GCDH-207ENST00000588242 RXRBP28702 533 aa17.05■□□□□ 0.32
GCDH-207ENST00000588242 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
GCDH-207ENST00000588242 GLI3P10071 1580 aa17.05■□□□□ 0.32
GCDH-207ENST00000588242 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
GCDH-207ENST00000588242 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
GCDH-207ENST00000588242 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
GCDH-207ENST00000588242 TCP11L2Q8N4U5 519 aa17.03■□□□□ 0.32
GCDH-207ENST00000588242 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.32
GCDH-207ENST00000588242 NBPF4Q96M43 638 aa17.02■□□□□ 0.32
GCDH-207ENST00000588242 THRAP3Q9Y2W1 955 aaKnown RBP17.02■□□□□ 0.32
GCDH-207ENST00000588242 DIAPH1O60610 1272 aaKnown RBP17.01■□□□□ 0.31
GCDH-207ENST00000588242 FAM98CQ17RN3 349 aaKnown RBP17.01■□□□□ 0.31
GCDH-207ENST00000588242 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
GCDH-207ENST00000588242 A0A0G2JS52 829 aa17■□□□□ 0.31
GCDH-207ENST00000588242 IL13P35225 146 aa17■□□□□ 0.31
GCDH-207ENST00000588242 MYT1Q01538 1121 aa17■□□□□ 0.31
GCDH-207ENST00000588242 BARGINQ6ZT62 677 aa17■□□□□ 0.31
GCDH-207ENST00000588242 EYA1Q99502 592 aa17■□□□□ 0.31
GCDH-207ENST00000588242 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
GCDH-207ENST00000588242 USHBP1Q8N6Y0 703 aa16.99■□□□□ 0.31
GCDH-207ENST00000588242 IGSF1Q8N6C5 1336 aa16.97■□□□□ 0.31
GCDH-207ENST00000588242 ONECUT3O60422 494 aaPredicted RBP16.97■□□□□ 0.31
GCDH-207ENST00000588242 RGS12O14924 1447 aa16.96■□□□□ 0.31
GCDH-207ENST00000588242 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.31
GCDH-207ENST00000588242 IL2RBP14784 551 aa16.96■□□□□ 0.31
GCDH-207ENST00000588242 SEPT12Q8IYM1 358 aa16.96■□□□□ 0.31
GCDH-207ENST00000588242 CDCA7Q9BWT1 371 aaPredicted RBP16.96■□□□□ 0.31
GCDH-207ENST00000588242 NUDCQ9Y266 331 aa16.96■□□□□ 0.31
GCDH-207ENST00000588242 WNK3Q9BYP7 1800 aa16.96■□□□□ 0.3
GCDH-207ENST00000588242 DISP2A7MBM2 1401 aa16.96■□□□□ 0.3
GCDH-207ENST00000588242 NCAPD2Q15021 1401 aa16.96■□□□□ 0.3
GCDH-207ENST00000588242 THSD7AQ9UPZ6 1657 aa16.95■□□□□ 0.3
GCDH-207ENST00000588242 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
GCDH-207ENST00000588242 RGPD1P0DJD0 1748 aa16.95■□□□□ 0.3
GCDH-207ENST00000588242 SULT6B1Q6IMI4 303 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms