RNA–Protein interactions for RNA: ENST00000587997.6

GFAP-210, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 609 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-210ENST00000587997 PEAK1Q9H792 1746 aa21.49■■□□□ 1.03
GFAP-210ENST00000587997 DDB1Q16531 1140 aa21.49■■□□□ 1.03
GFAP-210ENST00000587997 TTC21BQ7Z4L5 1316 aa21.49■■□□□ 1.03
GFAP-210ENST00000587997 MON2Q7Z3U7 1717 aa21.49■■□□□ 1.03
GFAP-210ENST00000587997 CPSF1Q10570 1443 aaKnown RBP21.48■■□□□ 1.03
GFAP-210ENST00000587997 KCNH5Q8NCM2 988 aa21.48■■□□□ 1.03
GFAP-210ENST00000587997 RGPD3A6NKT7 1758 aaPredicted RBP21.47■■□□□ 1.03
GFAP-210ENST00000587997 RGPD4Q7Z3J3 1758 aa21.47■■□□□ 1.03
GFAP-210ENST00000587997 CSB-PGBD3P0DP91 1061 aa21.47■■□□□ 1.03
GFAP-210ENST00000587997 WDR17Q8IZU2 1322 aa21.47■■□□□ 1.03
GFAP-210ENST00000587997 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
GFAP-210ENST00000587997 KTN1Q86UP2 1357 aaKnown RBP21.47■■□□□ 1.03
GFAP-210ENST00000587997 AXIN2Q9Y2T1 843 aa21.44■■□□□ 1.02
GFAP-210ENST00000587997 LTN1O94822 1766 aa21.43■■□□□ 1.02
GFAP-210ENST00000587997 ARHGEF25Q86VW2 580 aa21.43■■□□□ 1.02
GFAP-210ENST00000587997 CDCA7Q9BWT1 371 aaPredicted RBP21.43■■□□□ 1.02
GFAP-210ENST00000587997 NFAT5O94916 1531 aa21.41■■□□□ 1.02
GFAP-210ENST00000587997 CARD11Q9BXL7 1154 aa21.41■■□□□ 1.02
GFAP-210ENST00000587997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
GFAP-210ENST00000587997 PPP1R1BQ9UD71 204 aaPredicted RBP21.39■■□□□ 1.01
GFAP-210ENST00000587997 ABCC6O95255 1503 aa21.39■■□□□ 1.01
GFAP-210ENST00000587997 USP54Q70EL1 1684 aa21.38■■□□□ 1.01
GFAP-210ENST00000587997 TMC1Q8TDI8 760 aa21.38■■□□□ 1.01
GFAP-210ENST00000587997 CARD10Q9BWT7 1032 aa21.38■■□□□ 1.01
GFAP-210ENST00000587997 SBNO2Q9Y2G9 1366 aa21.37■■□□□ 1.01
GFAP-210ENST00000587997 BCL11BQ9C0K0 894 aaPredicted RBP21.37■■□□□ 1.01
GFAP-210ENST00000587997 KAT6BQ8WYB5 2073 aa21.36■■□□□ 1.01
GFAP-210ENST00000587997 TONSLQ96HA7 1378 aa21.36■■□□□ 1.01
GFAP-210ENST00000587997 CCDC7Q96M83 1385 aa21.36■■□□□ 1.01
GFAP-210ENST00000587997 PLSCR1O15162 318 aa21.36■■□□□ 1.01
GFAP-210ENST00000587997 HDGFL2Q7Z4V5 671 aaPredicted RBP21.36■■□□□ 1.01
GFAP-210ENST00000587997 MARCH10Q8NA82 808 aaPredicted RBP21.36■■□□□ 1.01
GFAP-210ENST00000587997 SPON1Q9HCB6 807 aa21.36■■□□□ 1.01
GFAP-210ENST00000587997 EXOC5O00471 708 aa21.35■■□□□ 1.01
GFAP-210ENST00000587997 KCNQ2O43526 872 aa21.33■■□□□ 1.01
GFAP-210ENST00000587997 NME9Q86XW9 330 aa21.33■■□□□ 1.01
GFAP-210ENST00000587997 TNS2Q63HR2 1409 aa21.32■■□□□ 1
GFAP-210ENST00000587997 NLRP2Q9NX02 1062 aa21.32■■□□□ 1
GFAP-210ENST00000587997 USP31Q70CQ4 1352 aa21.32■■□□□ 1
GFAP-210ENST00000587997 CASZ1Q86V15 1759 aa21.31■■□□□ 1
GFAP-210ENST00000587997 PTF1AQ7RTS3 328 aa21.31■■□□□ 1
GFAP-210ENST00000587997 TERF2IPQ9NYB0 399 aa21.31■■□□□ 1
GFAP-210ENST00000587997 CD163L1Q9NR16 1453 aa21.31■■□□□ 1
GFAP-210ENST00000587997 NHSQ6T4R5 1651 aa21.31■■□□□ 1
GFAP-210ENST00000587997 BCL9O00512 1426 aa21.3■■□□□ 1
GFAP-210ENST00000587997 DCAF8L1A6NGE4 600 aa21.3■■□□□ 1
GFAP-210ENST00000587997 EDC4Q6P2E9 1401 aaKnown RBP21.29■■□□□ 1
GFAP-210ENST00000587997 SLC12A5Q9H2X9 1139 aa21.28■■□□□ 1
GFAP-210ENST00000587997 ANO8Q9HCE9 1232 aaPredicted RBP21.28■■□□□ 1
GFAP-210ENST00000587997 ERBB3P21860 1342 aa21.28■■□□□ 1
GFAP-210ENST00000587997 FAM208AQ9UK61 1670 aaKnown RBP21.28■■□□□ 1
GFAP-210ENST00000587997 STK32BQ9NY57 414 aa21.26■□□□□ 0.99
GFAP-210ENST00000587997 BTAF1O14981 1849 aa21.26■□□□□ 0.99
GFAP-210ENST00000587997 A0A1W2PP64 1363 aa21.25■□□□□ 0.99
GFAP-210ENST00000587997 NINLQ9Y2I6 1382 aa21.25■□□□□ 0.99
GFAP-210ENST00000587997 IL2RBP14784 551 aa21.25■□□□□ 0.99
GFAP-210ENST00000587997 TXNRD1Q16881 649 aa21.25■□□□□ 0.99
GFAP-210ENST00000587997 ANKRD24Q8TF21 1146 aa21.25■□□□□ 0.99
GFAP-210ENST00000587997 ACSBG1Q96GR2 724 aa21.24■□□□□ 0.99
GFAP-210ENST00000587997 PROM2Q8N271 834 aa21.23■□□□□ 0.99
GFAP-210ENST00000587997 MYOM1P52179 1685 aa21.22■□□□□ 0.99
GFAP-210ENST00000587997 ZBTB7AO95365 584 aa21.22■□□□□ 0.99
GFAP-210ENST00000587997 YY1P25490 414 aa21.21■□□□□ 0.99
GFAP-210ENST00000587997 SLC15A2Q16348 729 aa21.2■□□□□ 0.98
GFAP-210ENST00000587997 LTV1Q96GA3 475 aaPredicted RBP21.2■□□□□ 0.98
GFAP-210ENST00000587997 PUS7Q96PZ0 661 aaKnown RBP21.2■□□□□ 0.98
GFAP-210ENST00000587997 RGPD2P0DJD1 1756 aa21.19■□□□□ 0.98
GFAP-210ENST00000587997 PDGFDQ9GZP0 370 aaPredicted RBP21.19■□□□□ 0.98
GFAP-210ENST00000587997 COG3Q96JB2 828 aa21.18■□□□□ 0.98
GFAP-210ENST00000587997 ATF5Q9Y2D1 282 aaPredicted RBP21.18■□□□□ 0.98
GFAP-210ENST00000587997 ST20-MTHFSA0A0A6YYL1 179 aa21.17■□□□□ 0.98
GFAP-210ENST00000587997 SLC24A1O60721 1099 aa21.17■□□□□ 0.98
GFAP-210ENST00000587997 IP6K1Q92551 441 aa21.16■□□□□ 0.98
GFAP-210ENST00000587997 AMPHP49418 695 aa21.14■□□□□ 0.97
GFAP-210ENST00000587997 DDX54Q8TDD1 881 aaKnown RBP21.14■□□□□ 0.97
GFAP-210ENST00000587997 DOT1LQ8TEK3 1739 aa21.14■□□□□ 0.97
GFAP-210ENST00000587997 PAPPAQ13219 1627 aa21.14■□□□□ 0.97
GFAP-210ENST00000587997 TESK2Q96S53 571 aa21.13■□□□□ 0.97
GFAP-210ENST00000587997 KIF20BQ96Q89 1820 aa21.13■□□□□ 0.97
GFAP-210ENST00000587997 MTFR1LQ9H019 292 aa21.12■□□□□ 0.97
GFAP-210ENST00000587997 ANKRD36BQ8N2N9 1353 aa21.1■□□□□ 0.97
GFAP-210ENST00000587997 MAP3K19Q56UN5 1328 aa21.1■□□□□ 0.97
GFAP-210ENST00000587997 HOXC9P31274 260 aa21.1■□□□□ 0.97
GFAP-210ENST00000587997 PTGER2P43116 358 aa21.1■□□□□ 0.97
GFAP-210ENST00000587997 SYTL4Q96C24 671 aaPredicted RBP21.1■□□□□ 0.97
GFAP-210ENST00000587997 SHANK3Q9BYB0 1731 aa21.09■□□□□ 0.97
GFAP-210ENST00000587997 TMF1P82094 1093 aa21.09■□□□□ 0.97
GFAP-210ENST00000587997 QSER1Q2KHR3 1735 aa21.09■□□□□ 0.97
GFAP-210ENST00000587997 SMG6Q86US8 1419 aaKnown RBP21.07■□□□□ 0.96
GFAP-210ENST00000587997 FBLN1P23142 703 aa21.07■□□□□ 0.96
GFAP-210ENST00000587997 FHDC1Q9C0D6 1143 aaPredicted RBP21.07■□□□□ 0.96
GFAP-210ENST00000587997 CHD4Q14839 1912 aa21.07■□□□□ 0.96
GFAP-210ENST00000587997 TUBGCP6Q96RT7 1819 aa21.06■□□□□ 0.96
GFAP-210ENST00000587997 RTL1A6NKG5 1358 aa21.06■□□□□ 0.96
GFAP-210ENST00000587997 USP47Q96K76 1375 aa21.06■□□□□ 0.96
GFAP-210ENST00000587997 LY75O60449 1722 aa21.06■□□□□ 0.96
GFAP-210ENST00000587997 ZNF827Q17R98 1081 aa21.05■□□□□ 0.96
GFAP-210ENST00000587997 RRS1Q15050 365 aaKnown RBP21.04■□□□□ 0.96
GFAP-210ENST00000587997 SLC27A3Q5K4L6 730 aa21.04■□□□□ 0.96
GFAP-210ENST00000587997 ZCRB1Q8TBF4 217 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms