RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 TCP11L2Q8N4U5 519 aa16.25■□□□□ 0.19
PRKCSH-206ENST00000587509 CSB-PGBD3P0DP91 1061 aa16.24■□□□□ 0.19
PRKCSH-206ENST00000587509 SF3B2Q13435 895 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-206ENST00000587509 BARGINQ6ZT62 677 aa16.24■□□□□ 0.19
PRKCSH-206ENST00000587509 MYOM1P52179 1685 aa16.24■□□□□ 0.19
PRKCSH-206ENST00000587509 BLMP54132 1417 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-206ENST00000587509 HSPA5P11021 654 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-206ENST00000587509 LARP1Q6PKG0 1096 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-206ENST00000587509 TOM1L2Q6ZVM7 507 aa16.23■□□□□ 0.19
PRKCSH-206ENST00000587509 USP35Q9P2H5 1018 aa16.23■□□□□ 0.19
PRKCSH-206ENST00000587509 WDR17Q8IZU2 1322 aa16.22■□□□□ 0.19
PRKCSH-206ENST00000587509 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
PRKCSH-206ENST00000587509 NSD3Q9BZ95 1437 aa16.21■□□□□ 0.19
PRKCSH-206ENST00000587509 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
PRKCSH-206ENST00000587509 CDCA7Q9BWT1 371 aaPredicted RBP16.21■□□□□ 0.19
PRKCSH-206ENST00000587509 KIF20BQ96Q89 1820 aa16.21■□□□□ 0.19
PRKCSH-206ENST00000587509 LTN1O94822 1766 aa16.21■□□□□ 0.18
PRKCSH-206ENST00000587509 C11orf95C9JLR9 678 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-206ENST00000587509 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
PRKCSH-206ENST00000587509 CCDC7Q96M83 1385 aa16.2■□□□□ 0.18
PRKCSH-206ENST00000587509 COL18A1P39060 1754 aa16.2■□□□□ 0.18
PRKCSH-206ENST00000587509 PDE3BQ13370 1112 aa16.19■□□□□ 0.18
PRKCSH-206ENST00000587509 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
PRKCSH-206ENST00000587509 PARP4Q9UKK3 1724 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-206ENST00000587509 SMG6Q86US8 1419 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-206ENST00000587509 ERBB3P21860 1342 aa16.18■□□□□ 0.18
PRKCSH-206ENST00000587509 FAM208AQ9UK61 1670 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-206ENST00000587509 EP400Q96L91 3159 aa16.17■□□□□ 0.18
PRKCSH-206ENST00000587509 ZRANB1Q9UGI0 708 aa16.17■□□□□ 0.18
PRKCSH-206ENST00000587509 AMPHP49418 695 aa16.16■□□□□ 0.18
PRKCSH-206ENST00000587509 CARD10Q9BWT7 1032 aa16.16■□□□□ 0.18
PRKCSH-206ENST00000587509 KIF24Q5T7B8 1368 aa16.15■□□□□ 0.18
PRKCSH-206ENST00000587509 WNK3Q9BYP7 1800 aa16.15■□□□□ 0.18
PRKCSH-206ENST00000587509 RGPD1P0DJD0 1748 aa16.15■□□□□ 0.18
PRKCSH-206ENST00000587509 FAM196AQ6ZSG2 479 aa16.15■□□□□ 0.18
PRKCSH-206ENST00000587509 AXIN2Q9Y2T1 843 aa16.15■□□□□ 0.18
PRKCSH-206ENST00000587509 OVOS2A0A0G2JMS6 1433 aa16.14■□□□□ 0.17
PRKCSH-206ENST00000587509 FYB1O15117 783 aa16.14■□□□□ 0.17
PRKCSH-206ENST00000587509 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
PRKCSH-206ENST00000587509 LRRC37A3O60309 1634 aa16.14■□□□□ 0.17
PRKCSH-206ENST00000587509 NSD2O96028 1365 aa16.13■□□□□ 0.17
PRKCSH-206ENST00000587509 BAG6P46379 1132 aa16.13■□□□□ 0.17
PRKCSH-206ENST00000587509 DDB1Q16531 1140 aa16.13■□□□□ 0.17
PRKCSH-206ENST00000587509 ANKRD24Q8TF21 1146 aa16.13■□□□□ 0.17
PRKCSH-206ENST00000587509 IP6K1Q92551 441 aa16.13■□□□□ 0.17
PRKCSH-206ENST00000587509 NLRP2Q9NX02 1062 aa16.13■□□□□ 0.17
PRKCSH-206ENST00000587509 MAP3K19Q56UN5 1328 aa16.13■□□□□ 0.17
PRKCSH-206ENST00000587509 RGPD5Q99666 1765 aa16.12■□□□□ 0.17
PRKCSH-206ENST00000587509 FLT4P35916 1363 aa16.12■□□□□ 0.17
PRKCSH-206ENST00000587509 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
PRKCSH-206ENST00000587509 HOXC9P31274 260 aa16.1■□□□□ 0.17
PRKCSH-206ENST00000587509 DISP2A7MBM2 1401 aa16.1■□□□□ 0.17
PRKCSH-206ENST00000587509 CARD14Q9BXL6 1004 aa16.09■□□□□ 0.17
PRKCSH-206ENST00000587509 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.17
PRKCSH-206ENST00000587509 IL2RBP14784 551 aa16.08■□□□□ 0.16
PRKCSH-206ENST00000587509 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.16
PRKCSH-206ENST00000587509 EXOC5O00471 708 aa16.07■□□□□ 0.16
PRKCSH-206ENST00000587509 RRS1Q15050 365 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-206ENST00000587509 KNSTRNQ9Y448 316 aa16.07■□□□□ 0.16
PRKCSH-206ENST00000587509 INSRP06213 1382 aa16.06■□□□□ 0.16
PRKCSH-206ENST00000587509 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
PRKCSH-206ENST00000587509 LTV1Q96GA3 475 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-206ENST00000587509 PANK3Q9H999 370 aa16.06■□□□□ 0.16
PRKCSH-206ENST00000587509 TNS1Q9HBL0 1735 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-206ENST00000587509 BCL9O00512 1426 aa16.05■□□□□ 0.16
PRKCSH-206ENST00000587509 FAM182BQ5T319 152 aa16.05■□□□□ 0.16
PRKCSH-206ENST00000587509 TRIM37O94972 964 aa16.03■□□□□ 0.16
PRKCSH-206ENST00000587509 PEAK1Q9H792 1746 aa16.02■□□□□ 0.16
PRKCSH-206ENST00000587509 PPM1GO15355 546 aaPredicted RBP16.02■□□□□ 0.16
PRKCSH-206ENST00000587509 DEFB132Q7Z7B7 95 aa16.02■□□□□ 0.16
PRKCSH-206ENST00000587509 APBA3O96018 575 aa16.01■□□□□ 0.15
PRKCSH-206ENST00000587509 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
PRKCSH-206ENST00000587509 MORC1Q86VD1 984 aa16■□□□□ 0.15
PRKCSH-206ENST00000587509 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
PRKCSH-206ENST00000587509 RGPD3A6NKT7 1758 aaPredicted RBP15.99■□□□□ 0.15
PRKCSH-206ENST00000587509 RGPD4Q7Z3J3 1758 aa15.99■□□□□ 0.15
PRKCSH-206ENST00000587509 WASHC2AQ641Q2 1341 aa15.98■□□□□ 0.15
PRKCSH-206ENST00000587509 FBLN1P23142 703 aa15.98■□□□□ 0.15
PRKCSH-206ENST00000587509 HSP90AB2PQ58FF8 381 aa15.98■□□□□ 0.15
PRKCSH-206ENST00000587509 MARCH10Q8NA82 808 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-206ENST00000587509 BCL11BQ9C0K0 894 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-206ENST00000587509 TATP17735 454 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-206ENST00000587509 TNNT2P45379 298 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-206ENST00000587509 EN1Q05925 392 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-206ENST00000587509 PLEKHG2Q9H7P9 1386 aa15.96■□□□□ 0.15
PRKCSH-206ENST00000587509 NHSQ6T4R5 1651 aa15.95■□□□□ 0.14
PRKCSH-206ENST00000587509 MEGF6O75095 1541 aa15.95■□□□□ 0.14
PRKCSH-206ENST00000587509 POLKQ9UBT6 870 aa15.95■□□□□ 0.14
PRKCSH-206ENST00000587509 MAP2P11137 1827 aaKnown RBP15.95■□□□□ 0.14
PRKCSH-206ENST00000587509 PCDH11XQ9BZA7 1347 aa15.94■□□□□ 0.14
PRKCSH-206ENST00000587509 PCDH11YQ9BZA8 1340 aa15.94■□□□□ 0.14
PRKCSH-206ENST00000587509 NBPF6Q5VWK0 638 aa15.94■□□□□ 0.14
PRKCSH-206ENST00000587509 ZCRB1Q8TBF4 217 aaKnown RBP15.94■□□□□ 0.14
PRKCSH-206ENST00000587509 NBPF4Q96M43 638 aa15.94■□□□□ 0.14
PRKCSH-206ENST00000587509 NPC1L1Q9UHC9 1359 aa15.94■□□□□ 0.14
PRKCSH-206ENST00000587509 SBF2Q86WG5 1849 aa15.94■□□□□ 0.14
PRKCSH-206ENST00000587509 RREB1Q92766 1687 aa15.93■□□□□ 0.14
PRKCSH-206ENST00000587509 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-206ENST00000587509 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
PRKCSH-206ENST00000587509 CAMKK2Q96RR4 588 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms