RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PROM2Q8N271 834 aa12.5□□□□□ -0.41
SDF2-204ENST00000587338 AATKQ6ZMQ8 1374 aa12.5□□□□□ -0.41
SDF2-204ENST00000587338 RAB3GAP2Q9H2M9 1393 aa12.5□□□□□ -0.41
SDF2-204ENST00000587338 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
SDF2-204ENST00000587338 SRPK2P78362 688 aaKnown RBP12.49□□□□□ -0.41
SDF2-204ENST00000587338 MARCH10Q8NA82 808 aaPredicted RBP12.49□□□□□ -0.41
SDF2-204ENST00000587338 STAC3Q96MF2 364 aa12.49□□□□□ -0.41
SDF2-204ENST00000587338 SYT17Q9BSW7 474 aa12.49□□□□□ -0.41
SDF2-204ENST00000587338 GOLGB1Q14789 3259 aaKnown RBP12.48□□□□□ -0.41
SDF2-204ENST00000587338 NLRP6P59044 892 aa12.48□□□□□ -0.41
SDF2-204ENST00000587338 C1QTNF8P60827 252 aa12.48□□□□□ -0.41
SDF2-204ENST00000587338 TXNRD1Q16881 649 aa12.48□□□□□ -0.41
SDF2-204ENST00000587338 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
SDF2-204ENST00000587338 SLC15A2Q16348 729 aa12.47□□□□□ -0.41
SDF2-204ENST00000587338 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
SDF2-204ENST00000587338 BCL9O00512 1426 aa12.46□□□□□ -0.41
SDF2-204ENST00000587338 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.41
SDF2-204ENST00000587338 AKAP12Q02952 1782 aa12.46□□□□□ -0.41
SDF2-204ENST00000587338 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
SDF2-204ENST00000587338 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
SDF2-204ENST00000587338 SLIT3O75094 1523 aa12.46□□□□□ -0.42
SDF2-204ENST00000587338 USP6P35125 1406 aa12.45□□□□□ -0.42
SDF2-204ENST00000587338 BRD4O60885 1362 aaPredicted RBP12.45□□□□□ -0.42
SDF2-204ENST00000587338 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
SDF2-204ENST00000587338 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
SDF2-204ENST00000587338 CPSF1Q10570 1443 aaKnown RBP12.45□□□□□ -0.42
SDF2-204ENST00000587338 CHD4Q14839 1912 aa12.45□□□□□ -0.42
SDF2-204ENST00000587338 ARXQ96QS3 562 aa12.44□□□□□ -0.42
SDF2-204ENST00000587338 SGIP1Q9BQI5 828 aa12.44□□□□□ -0.42
SDF2-204ENST00000587338 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
SDF2-204ENST00000587338 SOX12O15370 315 aa12.43□□□□□ -0.42
SDF2-204ENST00000587338 CABP1Q9NZU7 370 aa12.43□□□□□ -0.42
SDF2-204ENST00000587338 COL18A1P39060 1754 aa12.43□□□□□ -0.42
SDF2-204ENST00000587338 PIK3C2AO00443 1686 aa12.42□□□□□ -0.42
SDF2-204ENST00000587338 EXOC5O00471 708 aa12.42□□□□□ -0.42
SDF2-204ENST00000587338 GPR162Q16538 588 aa12.42□□□□□ -0.42
SDF2-204ENST00000587338 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
SDF2-204ENST00000587338 CARD10Q9BWT7 1032 aa12.42□□□□□ -0.42
SDF2-204ENST00000587338 GIGYF1O75420 1035 aaPredicted RBP12.41□□□□□ -0.42
SDF2-204ENST00000587338 IFFO2Q5TF58 517 aa12.41□□□□□ -0.42
SDF2-204ENST00000587338 TNS2Q63HR2 1409 aa12.41□□□□□ -0.42
SDF2-204ENST00000587338 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
SDF2-204ENST00000587338 KIAA1210Q9ULL0 1709 aa12.41□□□□□ -0.42
SDF2-204ENST00000587338 MAP3K5Q99683 1374 aa12.41□□□□□ -0.42
SDF2-204ENST00000587338 ARHGEF25Q86VW2 580 aa12.4□□□□□ -0.42
SDF2-204ENST00000587338 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.42
SDF2-204ENST00000587338 ACSBG1Q96GR2 724 aa12.4□□□□□ -0.42
SDF2-204ENST00000587338 QRICH2Q9H0J4 1663 aa12.4□□□□□ -0.42
SDF2-204ENST00000587338 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
SDF2-204ENST00000587338 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
SDF2-204ENST00000587338 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
SDF2-204ENST00000587338 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
SDF2-204ENST00000587338 PAPPAQ13219 1627 aa12.38□□□□□ -0.43
SDF2-204ENST00000587338 ZNF827Q17R98 1081 aa12.38□□□□□ -0.43
SDF2-204ENST00000587338 TRPM1Q7Z4N2 1603 aa12.37□□□□□ -0.43
SDF2-204ENST00000587338 ABCC6O95255 1503 aa12.37□□□□□ -0.43
SDF2-204ENST00000587338 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
SDF2-204ENST00000587338 NFAT5O94916 1531 aa12.36□□□□□ -0.43
SDF2-204ENST00000587338 POLD1P28340 1107 aa12.35□□□□□ -0.43
SDF2-204ENST00000587338 NLRP2Q9NX02 1062 aa12.35□□□□□ -0.43
SDF2-204ENST00000587338 EVC2Q86UK5 1308 aa12.35□□□□□ -0.43
SDF2-204ENST00000587338 BTAF1O14981 1849 aa12.34□□□□□ -0.43
SDF2-204ENST00000587338 LRRC4BQ9NT99 713 aa12.34□□□□□ -0.43
SDF2-204ENST00000587338 TTC21AQ8NDW8 1320 aa12.34□□□□□ -0.43
SDF2-204ENST00000587338 IL2RBP14784 551 aa12.33□□□□□ -0.44
SDF2-204ENST00000587338 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
SDF2-204ENST00000587338 SHANK3Q9BYB0 1731 aa12.32□□□□□ -0.44
SDF2-204ENST00000587338 NLGN2Q8NFZ4 835 aa12.32□□□□□ -0.44
SDF2-204ENST00000587338 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
SDF2-204ENST00000587338 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
SDF2-204ENST00000587338 ERBB3P21860 1342 aa12.32□□□□□ -0.44
SDF2-204ENST00000587338 SLC16A10Q8TF71 515 aa12.31□□□□□ -0.44
SDF2-204ENST00000587338 TFCP2L1Q9NZI6 479 aa12.31□□□□□ -0.44
SDF2-204ENST00000587338 PNPLA7Q6ZV29 1317 aa12.31□□□□□ -0.44
SDF2-204ENST00000587338 KTN1Q86UP2 1357 aaKnown RBP12.3□□□□□ -0.44
SDF2-204ENST00000587338 KCNQ4P56696 695 aa12.29□□□□□ -0.44
SDF2-204ENST00000587338 SLC27A3Q5K4L6 730 aa12.29□□□□□ -0.44
SDF2-204ENST00000587338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.29□□□□□ -0.44
SDF2-204ENST00000587338 ANKRD24Q8TF21 1146 aa12.29□□□□□ -0.44
SDF2-204ENST00000587338 YBX3P16989 372 aaKnown RBP eCLIP12.28□□□□□ -0.44
SDF2-204ENST00000587338 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
SDF2-204ENST00000587338 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
SDF2-204ENST00000587338 GRIN3BO60391 1043 aa12.27□□□□□ -0.45
SDF2-204ENST00000587338 NME9Q86XW9 330 aa12.27□□□□□ -0.45
SDF2-204ENST00000587338 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
SDF2-204ENST00000587338 TUBGCP6Q96RT7 1819 aa12.27□□□□□ -0.45
SDF2-204ENST00000587338 ATP10DQ9P241 1426 aa12.27□□□□□ -0.45
SDF2-204ENST00000587338 COL24A1Q17RW2 1714 aa12.26□□□□□ -0.45
SDF2-204ENST00000587338 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
SDF2-204ENST00000587338 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
SDF2-204ENST00000587338 LTN1O94822 1766 aa12.25□□□□□ -0.45
SDF2-204ENST00000587338 MON2Q7Z3U7 1717 aa12.25□□□□□ -0.45
SDF2-204ENST00000587338 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
SDF2-204ENST00000587338 PRIM1P49642 420 aaKnown RBP12.24□□□□□ -0.45
SDF2-204ENST00000587338 MSL1Q68DK7 614 aa12.24□□□□□ -0.45
SDF2-204ENST00000587338 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
SDF2-204ENST00000587338 ZNF526Q8TF50 670 aaPredicted RBP12.23□□□□□ -0.45
SDF2-204ENST00000587338 LTV1Q96GA3 475 aaPredicted RBP12.23□□□□□ -0.45
SDF2-204ENST00000587338 CCNL1Q9UK58 526 aaPredicted RBP12.23□□□□□ -0.45
SDF2-204ENST00000587338 DOT1LQ8TEK3 1739 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms