RNA–Protein interactions for RNA: ENST00000587275.1

U2AF2-204, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

TSL 4

Gene U2AF2, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-204ENST00000587275 PDE3BQ13370 1112 aa28.85■■■□□ 2.21
U2AF2-204ENST00000587275 SBNO2Q9Y2G9 1366 aa28.85■■■□□ 2.21
U2AF2-204ENST00000587275 APBA3O96018 575 aa28.83■■■□□ 2.21
U2AF2-204ENST00000587275 PARD3Q8TEW0 1356 aa28.81■■■□□ 2.2
U2AF2-204ENST00000587275 ARHGEF25Q86VW2 580 aa28.81■■■□□ 2.2
U2AF2-204ENST00000587275 KTN1Q86UP2 1357 aaKnown RBP28.8■■■□□ 2.2
U2AF2-204ENST00000587275 WDR17Q8IZU2 1322 aa28.79■■■□□ 2.2
U2AF2-204ENST00000587275 ABCC6O95255 1503 aa28.79■■■□□ 2.2
U2AF2-204ENST00000587275 OVOS2A0A0G2JMS6 1433 aa28.78■■■□□ 2.2
U2AF2-204ENST00000587275 OVOS2A0A0J9YW53 1432 aa28.78■■■□□ 2.2
U2AF2-204ENST00000587275 OVOS2Q6IE36 1432 aa28.78■■■□□ 2.2
U2AF2-204ENST00000587275 TTC21AQ8NDW8 1320 aa28.78■■■□□ 2.2
U2AF2-204ENST00000587275 SOX12O15370 315 aa28.77■■■□□ 2.2
U2AF2-204ENST00000587275 ZNF692Q9BU19 519 aaPredicted RBP28.77■■■□□ 2.2
U2AF2-204ENST00000587275 TOM1L2Q6ZVM7 507 aa28.75■■■□□ 2.19
U2AF2-204ENST00000587275 PTF1AQ7RTS3 328 aa28.75■■■□□ 2.19
U2AF2-204ENST00000587275 CARD11Q9BXL7 1154 aa28.73■■■□□ 2.19
U2AF2-204ENST00000587275 CASZ1Q86V15 1759 aa28.72■■■□□ 2.19
U2AF2-204ENST00000587275 USP31Q70CQ4 1352 aa28.72■■■□□ 2.19
U2AF2-204ENST00000587275 DDB1Q16531 1140 aa28.7■■■□□ 2.18
U2AF2-204ENST00000587275 KCNH5Q8NCM2 988 aa28.7■■■□□ 2.18
U2AF2-204ENST00000587275 NME9Q86XW9 330 aa28.69■■■□□ 2.18
U2AF2-204ENST00000587275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.69■■■□□ 2.18
U2AF2-204ENST00000587275 MARCH10Q8NA82 808 aaPredicted RBP28.69■■■□□ 2.18
U2AF2-204ENST00000587275 NHSQ6T4R5 1651 aa28.68■■■□□ 2.18
U2AF2-204ENST00000587275 TONSLQ96HA7 1378 aa28.67■■■□□ 2.18
U2AF2-204ENST00000587275 A0A1W2PP64 1363 aa28.66■■■□□ 2.18
U2AF2-204ENST00000587275 CARD10Q9BWT7 1032 aa28.66■■■□□ 2.18
U2AF2-204ENST00000587275 BCL9O00512 1426 aa28.66■■■□□ 2.18
U2AF2-204ENST00000587275 RGPD2P0DJD1 1756 aa28.65■■■□□ 2.18
U2AF2-204ENST00000587275 SLC12A5Q9H2X9 1139 aa28.65■■■□□ 2.18
U2AF2-204ENST00000587275 EDC4Q6P2E9 1401 aaKnown RBP28.64■■■□□ 2.18
U2AF2-204ENST00000587275 TNS2Q63HR2 1409 aa28.63■■■□□ 2.17
U2AF2-204ENST00000587275 FAM208AQ9UK61 1670 aaKnown RBP28.61■■■□□ 2.17
U2AF2-204ENST00000587275 BTAF1O14981 1849 aa28.61■■■□□ 2.17
U2AF2-204ENST00000587275 CSB-PGBD3P0DP91 1061 aa28.6■■■□□ 2.17
U2AF2-204ENST00000587275 TMC1Q8TDI8 760 aa28.6■■■□□ 2.17
U2AF2-204ENST00000587275 TESK2Q96S53 571 aa28.6■■■□□ 2.17
U2AF2-204ENST00000587275 ANO8Q9HCE9 1232 aaPredicted RBP28.6■■■□□ 2.17
U2AF2-204ENST00000587275 ERBB3P21860 1342 aa28.6■■■□□ 2.17
U2AF2-204ENST00000587275 CCDC7Q96M83 1385 aa28.6■■■□□ 2.17
U2AF2-204ENST00000587275 C11orf95C9JLR9 678 aaPredicted RBP28.59■■■□□ 2.17
U2AF2-204ENST00000587275 SHANK3Q9BYB0 1731 aa28.58■■■□□ 2.17
U2AF2-204ENST00000587275 PLSCR1O15162 318 aa28.58■■■□□ 2.17
U2AF2-204ENST00000587275 PROM2Q8N271 834 aa28.58■■■□□ 2.17
U2AF2-204ENST00000587275 CDCA7Q9BWT1 371 aaPredicted RBP28.58■■■□□ 2.17
U2AF2-204ENST00000587275 BCL11BQ9C0K0 894 aaPredicted RBP28.58■■■□□ 2.17
U2AF2-204ENST00000587275 KAT6BQ8WYB5 2073 aa28.55■■■□□ 2.16
U2AF2-204ENST00000587275 NBPF14Q5TI25 921 aa28.55■■■□□ 2.16
U2AF2-204ENST00000587275 PAPPAQ13219 1627 aa28.54■■■□□ 2.16
U2AF2-204ENST00000587275 HDGFL2Q7Z4V5 671 aaPredicted RBP28.54■■■□□ 2.16
U2AF2-204ENST00000587275 ST20-MTHFSA0A0A6YYL1 179 aa28.52■■■□□ 2.16
U2AF2-204ENST00000587275 PDGFDQ9GZP0 370 aaPredicted RBP28.52■■■□□ 2.16
U2AF2-204ENST00000587275 MYOM1P52179 1685 aa28.51■■■□□ 2.16
U2AF2-204ENST00000587275 PUS7Q96PZ0 661 aaKnown RBP28.51■■■□□ 2.15
U2AF2-204ENST00000587275 KIF20BQ96Q89 1820 aa28.5■■■□□ 2.15
U2AF2-204ENST00000587275 EXOC5O00471 708 aa28.5■■■□□ 2.15
U2AF2-204ENST00000587275 KCNQ2O43526 872 aa28.5■■■□□ 2.15
U2AF2-204ENST00000587275 ANKRD24Q8TF21 1146 aa28.49■■■□□ 2.15
U2AF2-204ENST00000587275 TERF2IPQ9NYB0 399 aa28.49■■■□□ 2.15
U2AF2-204ENST00000587275 NLRP2Q9NX02 1062 aa28.48■■■□□ 2.15
U2AF2-204ENST00000587275 DOT1LQ8TEK3 1739 aa28.47■■■□□ 2.15
U2AF2-204ENST00000587275 FBLN1P23142 703 aa28.45■■■□□ 2.14
U2AF2-204ENST00000587275 NINLQ9Y2I6 1382 aa28.45■■■□□ 2.14
U2AF2-204ENST00000587275 TUBGCP6Q96RT7 1819 aa28.45■■■□□ 2.14
U2AF2-204ENST00000587275 TXNRD1Q16881 649 aa28.44■■■□□ 2.14
U2AF2-204ENST00000587275 IL2RBP14784 551 aa28.43■■■□□ 2.14
U2AF2-204ENST00000587275 ACSBG1Q96GR2 724 aa28.43■■■□□ 2.14
U2AF2-204ENST00000587275 SPON1Q9HCB6 807 aa28.43■■■□□ 2.14
U2AF2-204ENST00000587275 ANKRD36BQ8N2N9 1353 aa28.41■■■□□ 2.14
U2AF2-204ENST00000587275 IP6K1Q92551 441 aa28.41■■■□□ 2.14
U2AF2-204ENST00000587275 MAP3K19Q56UN5 1328 aa28.4■■■□□ 2.14
U2AF2-204ENST00000587275 USP47Q96K76 1375 aa28.39■■■□□ 2.14
U2AF2-204ENST00000587275 LY75O60449 1722 aa28.39■■■□□ 2.14
U2AF2-204ENST00000587275 QSER1Q2KHR3 1735 aa28.39■■■□□ 2.14
U2AF2-204ENST00000587275 TRIM26Q12899 539 aaPredicted RBP28.36■■■□□ 2.13
U2AF2-204ENST00000587275 LTV1Q96GA3 475 aaPredicted RBP28.36■■■□□ 2.13
U2AF2-204ENST00000587275 MEGF6O75095 1541 aa28.36■■■□□ 2.13
U2AF2-204ENST00000587275 HOXC9P31274 260 aa28.35■■■□□ 2.13
U2AF2-204ENST00000587275 ZBTB7AO95365 584 aa28.34■■■□□ 2.13
U2AF2-204ENST00000587275 SLC15A2Q16348 729 aa28.34■■■□□ 2.13
U2AF2-204ENST00000587275 COL24A1Q17RW2 1714 aa28.33■■■□□ 2.13
U2AF2-204ENST00000587275 PTGER2P43116 358 aa28.33■■■□□ 2.13
U2AF2-204ENST00000587275 COG3Q96JB2 828 aa28.33■■■□□ 2.13
U2AF2-204ENST00000587275 ANKRD26Q9UPS8 1709 aa28.32■■■□□ 2.12
U2AF2-204ENST00000587275 PPP1R1BQ9UD71 204 aaPredicted RBP28.31■■■□□ 2.12
U2AF2-204ENST00000587275 STK32BQ9NY57 414 aa28.3■■■□□ 2.12
U2AF2-204ENST00000587275 UTRNP46939 3433 aa28.3■■■□□ 2.12
U2AF2-204ENST00000587275 FYB1O15117 783 aa28.29■■■□□ 2.12
U2AF2-204ENST00000587275 LRRC4BQ9NT99 713 aa28.29■■■□□ 2.12
U2AF2-204ENST00000587275 RTL1A6NKG5 1358 aa28.28■■■□□ 2.12
U2AF2-204ENST00000587275 NSD2O96028 1365 aa28.28■■■□□ 2.12
U2AF2-204ENST00000587275 RRS1Q15050 365 aaKnown RBP28.28■■■□□ 2.12
U2AF2-204ENST00000587275 ZNF827Q17R98 1081 aa28.28■■■□□ 2.12
U2AF2-204ENST00000587275 GGNBP2Q9H3C7 697 aa28.28■■■□□ 2.12
U2AF2-204ENST00000587275 ATF5Q9Y2D1 282 aaPredicted RBP28.27■■■□□ 2.12
U2AF2-204ENST00000587275 TOGARAM1Q9Y4F4 1720 aa28.26■■■□□ 2.12
U2AF2-204ENST00000587275 SGIP1Q9BQI5 828 aa28.26■■■□□ 2.11
U2AF2-204ENST00000587275 TMF1P82094 1093 aa28.25■■■□□ 2.11
U2AF2-204ENST00000587275 DDX54Q8TDD1 881 aaKnown RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms