RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-210ENST00000587235 WDR17Q8IZU2 1322 aa35.68■■■■□ 3.3
TCF3-210ENST00000587235 PUS7Q96PZ0 661 aaKnown RBP35.68■■■■□ 3.3
TCF3-210ENST00000587235 TIMELESSQ9UNS1 1208 aa35.68■■■■□ 3.3
TCF3-210ENST00000587235 TNS1Q9HBL0 1735 aaKnown RBP35.68■■■■□ 3.3
TCF3-210ENST00000587235 CD163L1Q9NR16 1453 aa35.67■■■■□ 3.3
TCF3-210ENST00000587235 CAMKK2Q96RR4 588 aa35.67■■■■□ 3.3
TCF3-210ENST00000587235 MON2Q7Z3U7 1717 aa35.66■■■■□ 3.3
TCF3-210ENST00000587235 ST20-MTHFSA0A0A6YYL1 179 aa35.66■■■■□ 3.3
TCF3-210ENST00000587235 NME9Q86XW9 330 aa35.66■■■■□ 3.3
TCF3-210ENST00000587235 USP31Q70CQ4 1352 aa35.64■■■■□ 3.3
TCF3-210ENST00000587235 TESK2Q96S53 571 aa35.64■■■■□ 3.3
TCF3-210ENST00000587235 TERF2IPQ9NYB0 399 aa35.64■■■■□ 3.3
TCF3-210ENST00000587235 CSB-PGBD3P0DP91 1061 aa35.63■■■■□ 3.29
TCF3-210ENST00000587235 PARP4Q9UKK3 1724 aaKnown RBP35.63■■■■□ 3.29
TCF3-210ENST00000587235 NFAT5O94916 1531 aa35.62■■■■□ 3.29
TCF3-210ENST00000587235 DDB1Q16531 1140 aa35.62■■■■□ 3.29
TCF3-210ENST00000587235 C11orf95C9JLR9 678 aaPredicted RBP35.6■■■■□ 3.29
TCF3-210ENST00000587235 CARD10Q9BWT7 1032 aa35.6■■■■□ 3.29
TCF3-210ENST00000587235 RGPD5Q99666 1765 aa35.59■■■■□ 3.29
TCF3-210ENST00000587235 R3HDM1Q15032 1099 aaKnown RBP35.58■■■■□ 3.29
TCF3-210ENST00000587235 SLC24A1O60721 1099 aa35.57■■■■□ 3.28
TCF3-210ENST00000587235 CDCA7Q9BWT1 371 aaPredicted RBP35.57■■■■□ 3.28
TCF3-210ENST00000587235 EDC4Q6P2E9 1401 aaKnown RBP35.57■■■■□ 3.28
TCF3-210ENST00000587235 A0A1W2PP64 1363 aa35.56■■■■□ 3.28
TCF3-210ENST00000587235 PARD3Q8TEW0 1356 aa35.55■■■■□ 3.28
TCF3-210ENST00000587235 OVOS2A0A0G2JMS6 1433 aa35.53■■■■□ 3.28
TCF3-210ENST00000587235 OVOS2A0A0J9YW53 1432 aa35.53■■■■□ 3.28
TCF3-210ENST00000587235 OVOS2Q6IE36 1432 aa35.53■■■■□ 3.28
TCF3-210ENST00000587235 LRRC37A3O60309 1634 aa35.5■■■■□ 3.27
TCF3-210ENST00000587235 MARCH10Q8NA82 808 aaPredicted RBP35.5■■■■□ 3.27
TCF3-210ENST00000587235 USP54Q70EL1 1684 aa35.49■■■■□ 3.27
TCF3-210ENST00000587235 NINLQ9Y2I6 1382 aa35.49■■■■□ 3.27
TCF3-210ENST00000587235 ABCC6O95255 1503 aa35.48■■■■□ 3.27
TCF3-210ENST00000587235 CCDC7Q96M83 1385 aa35.48■■■■□ 3.27
TCF3-210ENST00000587235 PEAK1Q9H792 1746 aa35.47■■■■□ 3.27
TCF3-210ENST00000587235 EXOC5O00471 708 aa35.47■■■■□ 3.27
TCF3-210ENST00000587235 NLRP2Q9NX02 1062 aa35.45■■■■□ 3.27
TCF3-210ENST00000587235 ERBB3P21860 1342 aa35.45■■■■□ 3.27
TCF3-210ENST00000587235 WNK3Q9BYP7 1800 aa35.43■■■■□ 3.26
TCF3-210ENST00000587235 LRP5O75197 1615 aa35.43■■■■□ 3.26
TCF3-210ENST00000587235 USP47Q96K76 1375 aa35.43■■■■□ 3.26
TCF3-210ENST00000587235 NBPF14Q5TI25 921 aa35.43■■■■□ 3.26
TCF3-210ENST00000587235 TMF1P82094 1093 aa35.42■■■■□ 3.26
TCF3-210ENST00000587235 PTF1AQ7RTS3 328 aa35.42■■■■□ 3.26
TCF3-210ENST00000587235 BCL11BQ9C0K0 894 aaPredicted RBP35.42■■■■□ 3.26
TCF3-210ENST00000587235 ANKRD24Q8TF21 1146 aa35.41■■■■□ 3.26
TCF3-210ENST00000587235 CCER1Q8TC90 406 aaPredicted RBP35.4■■■■□ 3.26
TCF3-210ENST00000587235 LTN1O94822 1766 aa35.4■■■■□ 3.26
TCF3-210ENST00000587235 RREB1Q92766 1687 aa35.4■■■■□ 3.26
TCF3-210ENST00000587235 SBF2Q86WG5 1849 aa35.39■■■■□ 3.26
TCF3-210ENST00000587235 PLSCR1O15162 318 aa35.39■■■■□ 3.26
TCF3-210ENST00000587235 COG3Q96JB2 828 aa35.39■■■■□ 3.26
TCF3-210ENST00000587235 BCL9O00512 1426 aa35.38■■■■□ 3.25
TCF3-210ENST00000587235 IP6K1Q92551 441 aa35.37■■■■□ 3.25
TCF3-210ENST00000587235 ANKRD36BQ8N2N9 1353 aa35.36■■■■□ 3.25
TCF3-210ENST00000587235 NUP188Q5SRE5 1749 aa35.35■■■■□ 3.25
TCF3-210ENST00000587235 IL2RBP14784 551 aa35.34■■■■□ 3.25
TCF3-210ENST00000587235 FBLN1P23142 703 aa35.31■■■■□ 3.24
TCF3-210ENST00000587235 TNS2Q63HR2 1409 aa35.31■■■■□ 3.24
TCF3-210ENST00000587235 CDCA8Q53HL2 280 aa35.3■■■■□ 3.24
TCF3-210ENST00000587235 LTV1Q96GA3 475 aaPredicted RBP35.3■■■■□ 3.24
TCF3-210ENST00000587235 MAP3K19Q56UN5 1328 aa35.29■■■■□ 3.24
TCF3-210ENST00000587235 FYB1O15117 783 aa35.27■■■■□ 3.24
TCF3-210ENST00000587235 AMPHP49418 695 aa35.27■■■■□ 3.24
TCF3-210ENST00000587235 PROM2Q8N271 834 aa35.27■■■■□ 3.24
TCF3-210ENST00000587235 KCNQ2O43526 872 aa35.26■■■■□ 3.24
TCF3-210ENST00000587235 HOXC9P31274 260 aa35.25■■■■□ 3.23
TCF3-210ENST00000587235 GGNBP2Q9H3C7 697 aa35.25■■■■□ 3.23
TCF3-210ENST00000587235 RGPD3A6NKT7 1758 aaPredicted RBP35.23■■■■□ 3.23
TCF3-210ENST00000587235 RGPD4Q7Z3J3 1758 aa35.23■■■■□ 3.23
TCF3-210ENST00000587235 ACSBG1Q96GR2 724 aa35.23■■■■□ 3.23
TCF3-210ENST00000587235 ANO8Q9HCE9 1232 aaPredicted RBP35.2■■■■□ 3.23
TCF3-210ENST00000587235 RRS1Q15050 365 aaKnown RBP35.19■■■■□ 3.22
TCF3-210ENST00000587235 TXNRD1Q16881 649 aa35.19■■■■□ 3.22
TCF3-210ENST00000587235 DDX54Q8TDD1 881 aaKnown RBP35.15■■■■□ 3.22
TCF3-210ENST00000587235 CARD14Q9BXL6 1004 aa35.14■■■■□ 3.22
TCF3-210ENST00000587235 SPON1Q9HCB6 807 aa35.14■■■■□ 3.22
TCF3-210ENST00000587235 KAT6BQ8WYB5 2073 aa35.13■■■■□ 3.21
TCF3-210ENST00000587235 FAM208AQ9UK61 1670 aaKnown RBP35.11■■■■□ 3.21
TCF3-210ENST00000587235 RTL1A6NKG5 1358 aa35.11■■■■□ 3.21
TCF3-210ENST00000587235 NHSQ6T4R5 1651 aa35.11■■■■□ 3.21
TCF3-210ENST00000587235 STK32BQ9NY57 414 aa35.08■■■■□ 3.21
TCF3-210ENST00000587235 NBPF6Q5VWK0 638 aa35.07■■■■□ 3.2
TCF3-210ENST00000587235 NBPF4Q96M43 638 aa35.07■■■■□ 3.2
TCF3-210ENST00000587235 MYOM1P52179 1685 aa35.06■■■■□ 3.2
TCF3-210ENST00000587235 PDGFDQ9GZP0 370 aaPredicted RBP35.06■■■■□ 3.2
TCF3-210ENST00000587235 SLC15A2Q16348 729 aa35.05■■■■□ 3.2
TCF3-210ENST00000587235 ZCRB1Q8TBF4 217 aaKnown RBP35.05■■■■□ 3.2
TCF3-210ENST00000587235 PPP1R1BQ9UD71 204 aaPredicted RBP35.05■■■■□ 3.2
TCF3-210ENST00000587235 RGPD2P0DJD1 1756 aa35.05■■■■□ 3.2
TCF3-210ENST00000587235 HSP90AB2PQ58FF8 381 aa35.04■■■■□ 3.2
TCF3-210ENST00000587235 NSD3Q9BZ95 1437 aa35.04■■■■□ 3.2
TCF3-210ENST00000587235 KIF20BQ96Q89 1820 aa35.02■■■■□ 3.2
TCF3-210ENST00000587235 USHBP1Q8N6Y0 703 aa35.02■■■■□ 3.2
TCF3-210ENST00000587235 EIF4G2P78344 907 aaKnown RBP eCLIP35.01■■■■□ 3.23e-7■■■■■ 49.2
TCF3-210ENST00000587235 POLR3GLQ9BT43 218 aa35.01■■■■□ 3.2
TCF3-210ENST00000587235 BTAF1O14981 1849 aa35■■■■□ 3.19
TCF3-210ENST00000587235 INSRP06213 1382 aa35■■■■□ 3.19
TCF3-210ENST00000587235 SMG6Q86US8 1419 aaKnown RBP34.99■■■■□ 3.19
TCF3-210ENST00000587235 MEGF6O75095 1541 aa34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms