RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 KIAA0232Q92628 1395 aa15.8■□□□□ 0.12
DNMT1-211ENST00000586988 FBLN1P23142 703 aa15.8■□□□□ 0.12
DNMT1-211ENST00000586988 HSPA1LP34931 641 aa15.8■□□□□ 0.12
DNMT1-211ENST00000586988 FAM208AQ9UK61 1670 aaKnown RBP15.79■□□□□ 0.12
DNMT1-211ENST00000586988 HOXC9P31274 260 aa15.79■□□□□ 0.12
DNMT1-211ENST00000586988 ZC3H6P61129 1189 aaKnown RBP15.79■□□□□ 0.12
DNMT1-211ENST00000586988 IP6K1Q92551 441 aa15.79■□□□□ 0.12
DNMT1-211ENST00000586988 PRDM11Q9NQV5 511 aa15.79■□□□□ 0.12
DNMT1-211ENST00000586988 NUDCQ9Y266 331 aa15.79■□□□□ 0.12
DNMT1-211ENST00000586988 LMO7Q8WWI1 1683 aa15.79■□□□□ 0.12
DNMT1-211ENST00000586988 COL18A1P39060 1754 aa15.78■□□□□ 0.12
DNMT1-211ENST00000586988 ZBTB7CA1YPR0 619 aa15.78■□□□□ 0.12
DNMT1-211ENST00000586988 DIAPH1O60610 1272 aaKnown RBP15.78■□□□□ 0.12
DNMT1-211ENST00000586988 WDR43Q15061 677 aaKnown RBP eCLIP15.78■□□□□ 0.12
DNMT1-211ENST00000586988 CCDC184Q52MB2 194 aa15.78■□□□□ 0.12
DNMT1-211ENST00000586988 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
DNMT1-211ENST00000586988 RGPD1P0DJD0 1748 aa15.75■□□□□ 0.11
DNMT1-211ENST00000586988 HSP90AB2PQ58FF8 381 aa15.75■□□□□ 0.11
DNMT1-211ENST00000586988 PNISRQ8TF01 805 aaKnown RBP15.75■□□□□ 0.11
DNMT1-211ENST00000586988 PLCH1Q4KWH8 1693 aa15.75■□□□□ 0.11
DNMT1-211ENST00000586988 NWD2Q9ULI1 1742 aa15.74■□□□□ 0.11
DNMT1-211ENST00000586988 CAMTA1Q9Y6Y1 1673 aa15.74■□□□□ 0.11
DNMT1-211ENST00000586988 EIF4A2Q14240 407 aaKnown RBP15.74■□□□□ 0.11
DNMT1-211ENST00000586988 ERBB3P21860 1342 aa15.73■□□□□ 0.11
DNMT1-211ENST00000586988 RGPD5Q99666 1765 aa15.73■□□□□ 0.11
DNMT1-211ENST00000586988 IL13P35225 146 aa15.73■□□□□ 0.11
DNMT1-211ENST00000586988 COL5A2P05997 1499 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-211ENST00000586988 NUTM2BA6NNL0 878 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-211ENST00000586988 NUTM2EB1AL46 878 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-211ENST00000586988 U2SURPO15042 1029 aaKnown RBP15.72■□□□□ 0.11
DNMT1-211ENST00000586988 CHRNA2Q15822 529 aa15.72■□□□□ 0.11
DNMT1-211ENST00000586988 NUTM2AQ8IVF1 878 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-211ENST00000586988 FAM9BQ8IZU0 186 aa15.72■□□□□ 0.11
DNMT1-211ENST00000586988 LRP6O75581 1613 aa15.72■□□□□ 0.11
DNMT1-211ENST00000586988 U2AF1L5P0DN76 240 aaPredicted RBP15.71■□□□□ 0.11
DNMT1-211ENST00000586988 U2AF1Q01081 240 aaKnown RBP eCLIP15.71■□□□□ 0.117e-7■□□□□ 10.4
DNMT1-211ENST00000586988 ANKRD24Q8TF21 1146 aa15.71■□□□□ 0.11
DNMT1-211ENST00000586988 ADAMTS2O95450 1211 aa15.7■□□□□ 0.1
DNMT1-211ENST00000586988 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
DNMT1-211ENST00000586988 NRAPQ86VF7 1730 aa15.7■□□□□ 0.1
DNMT1-211ENST00000586988 IGSF1Q8N6C5 1336 aa15.69■□□□□ 0.1
DNMT1-211ENST00000586988 FAM83GA6ND36 823 aa15.69■□□□□ 0.1
DNMT1-211ENST00000586988 LTV1Q96GA3 475 aaPredicted RBP15.69■□□□□ 0.1
DNMT1-211ENST00000586988 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
DNMT1-211ENST00000586988 NCAPD2Q15021 1401 aa15.68■□□□□ 0.1
DNMT1-211ENST00000586988 SLIT2O94813 1529 aa15.68■□□□□ 0.1
DNMT1-211ENST00000586988 KDRP35968 1356 aa15.68■□□□□ 0.1
DNMT1-211ENST00000586988 CSB-PGBD3P0DP91 1061 aa15.68■□□□□ 0.1
DNMT1-211ENST00000586988 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.68■□□□□ 0.1
DNMT1-211ENST00000586988 WDR17Q8IZU2 1322 aa15.68■□□□□ 0.1
DNMT1-211ENST00000586988 MEX3CQ5U5Q3 659 aaKnown RBP15.67■□□□□ 0.1
DNMT1-211ENST00000586988 ADAMTS8Q9UP79 889 aa15.67■□□□□ 0.1
DNMT1-211ENST00000586988 NEFMP07197 916 aa15.66■□□□□ 0.1
DNMT1-211ENST00000586988 BTG4Q9NY30 223 aa15.66■□□□□ 0.1
DNMT1-211ENST00000586988 RGPD2P0DJD1 1756 aa15.66■□□□□ 0.1
DNMT1-211ENST00000586988 CRB1P82279 1406 aa15.66■□□□□ 0.1
DNMT1-211ENST00000586988 PLEKHG2Q9H7P9 1386 aa15.65■□□□□ 0.1
DNMT1-211ENST00000586988 FCHSD2O94868 740 aa15.65■□□□□ 0.1
DNMT1-211ENST00000586988 EVA1CP58658 441 aa15.65■□□□□ 0.1
DNMT1-211ENST00000586988 EYA1Q99502 592 aa15.65■□□□□ 0.1
DNMT1-211ENST00000586988 MAPK8IP3Q9UPT6 1336 aa15.65■□□□□ 0.1
DNMT1-211ENST00000586988 SULT6B1Q6IMI4 303 aa15.64■□□□□ 0.09
DNMT1-211ENST00000586988 ILDR2Q71H61 639 aa15.64■□□□□ 0.09
DNMT1-211ENST00000586988 C8orf37Q96NL8 207 aa15.64■□□□□ 0.09
DNMT1-211ENST00000586988 RSPH6AQ9H0K4 717 aa15.64■□□□□ 0.09
DNMT1-211ENST00000586988 PARP4Q9UKK3 1724 aaKnown RBP15.63■□□□□ 0.09
DNMT1-211ENST00000586988 HMOX1P09601 288 aa15.63■□□□□ 0.09
DNMT1-211ENST00000586988 TOM1L2Q6ZVM7 507 aa15.63■□□□□ 0.09
DNMT1-211ENST00000586988 RUNDC1Q96C34 613 aa15.63■□□□□ 0.09
DNMT1-211ENST00000586988 NGLY1Q96IV0 654 aa15.63■□□□□ 0.09
DNMT1-211ENST00000586988 STRN4Q9NRL3 753 aa15.63■□□□□ 0.09
DNMT1-211ENST00000586988 NLRP2Q9NX02 1062 aa15.63■□□□□ 0.09
DNMT1-211ENST00000586988 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
DNMT1-211ENST00000586988 NBPF6Q5VWK0 638 aa15.62■□□□□ 0.09
DNMT1-211ENST00000586988 NBPF4Q96M43 638 aa15.62■□□□□ 0.09
DNMT1-211ENST00000586988 SOCS7O14512 581 aa15.61■□□□□ 0.09
DNMT1-211ENST00000586988 FNBP4Q8N3X1 1017 aaPredicted RBP15.61■□□□□ 0.09
DNMT1-211ENST00000586988 CARD10Q9BWT7 1032 aa15.61■□□□□ 0.09
DNMT1-211ENST00000586988 WNK3Q9BYP7 1800 aa15.61■□□□□ 0.09
DNMT1-211ENST00000586988 LARP1Q6PKG0 1096 aaKnown RBP15.6■□□□□ 0.09
DNMT1-211ENST00000586988 AEBP1Q8IUX7 1158 aa15.6■□□□□ 0.09
DNMT1-211ENST00000586988 UNC5CLQ8IV45 518 aa15.6■□□□□ 0.09
DNMT1-211ENST00000586988 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
DNMT1-211ENST00000586988 BCL9LQ86UU0 1499 aa15.59■□□□□ 0.09
DNMT1-211ENST00000586988 NGEFQ8N5V2 710 aa15.59■□□□□ 0.09
DNMT1-211ENST00000586988 USHBP1Q8N6Y0 703 aa15.59■□□□□ 0.09
DNMT1-211ENST00000586988 PLEKHF1Q96S99 279 aa15.59■□□□□ 0.09
DNMT1-211ENST00000586988 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.08
DNMT1-211ENST00000586988 RAPGEF4Q8WZA2 1011 aa15.58■□□□□ 0.08
DNMT1-211ENST00000586988 PKD1L3Q7Z443 1732 aa15.57■□□□□ 0.08
DNMT1-211ENST00000586988 USP21Q9UK80 565 aa15.57■□□□□ 0.08
DNMT1-211ENST00000586988 THRAP3Q9Y2W1 955 aaKnown RBP15.57■□□□□ 0.08
DNMT1-211ENST00000586988 AFF2P51816 1311 aa15.57■□□□□ 0.08
DNMT1-211ENST00000586988 OVOS2A0A0G2JMS6 1433 aa15.57■□□□□ 0.08
DNMT1-211ENST00000586988 MEGF6O75095 1541 aa15.57■□□□□ 0.08
DNMT1-211ENST00000586988 TATP17735 454 aaPredicted RBP15.56■□□□□ 0.08
DNMT1-211ENST00000586988 VPS72Q15906 364 aa15.56■□□□□ 0.08
DNMT1-211ENST00000586988 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
DNMT1-211ENST00000586988 SPATA31A1Q5TZJ5 1347 aa15.55■□□□□ 0.08
DNMT1-211ENST00000586988 SPATA31A5Q5VU36 1347 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms