RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-208ENST00000586900 RTL1A6NKG5 1358 aa16.78■□□□□ 0.28
PKN1-208ENST00000586900 ZBTB7CA1YPR0 619 aa16.78■□□□□ 0.28
PKN1-208ENST00000586900 CC2D1BQ5T0F9 858 aaKnown RBP16.78■□□□□ 0.28
PKN1-208ENST00000586900 TRPC5Q9UL62 973 aaPredicted RBP16.78■□□□□ 0.28
PKN1-208ENST00000586900 ATRNO75882 1429 aa16.78■□□□□ 0.28
PKN1-208ENST00000586900 BLMP54132 1417 aaPredicted RBP16.78■□□□□ 0.28
PKN1-208ENST00000586900 RRS1Q15050 365 aaKnown RBP16.77■□□□□ 0.28
PKN1-208ENST00000586900 VPS72Q15906 364 aa16.77■□□□□ 0.28
PKN1-208ENST00000586900 QTRT2Q9H974 415 aaKnown RBP16.77■□□□□ 0.28
PKN1-208ENST00000586900 AXIN2Q9Y2T1 843 aa16.77■□□□□ 0.28
PKN1-208ENST00000586900 COL5A2P05997 1499 aaPredicted RBP16.76■□□□□ 0.27
PKN1-208ENST00000586900 AMPHP49418 695 aa16.76■□□□□ 0.27
PKN1-208ENST00000586900 POLKQ9UBT6 870 aa16.76■□□□□ 0.27
PKN1-208ENST00000586900 RGPD5Q99666 1765 aa16.76■□□□□ 0.27
PKN1-208ENST00000586900 HOXC9P31274 260 aa16.75■□□□□ 0.27
PKN1-208ENST00000586900 EVA1CP58658 441 aa16.75■□□□□ 0.27
PKN1-208ENST00000586900 SMG6Q86US8 1419 aaKnown RBP16.75■□□□□ 0.27
PKN1-208ENST00000586900 FLT4P35916 1363 aa16.75■□□□□ 0.27
PKN1-208ENST00000586900 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
PKN1-208ENST00000586900 POTEAQ6S8J7 498 aa16.74■□□□□ 0.27
PKN1-208ENST00000586900 EMILIN1Q9Y6C2 1016 aa16.74■□□□□ 0.27
PKN1-208ENST00000586900 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
PKN1-208ENST00000586900 WDR17Q8IZU2 1322 aa16.73■□□□□ 0.27
PKN1-208ENST00000586900 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
PKN1-208ENST00000586900 GJD4Q96KN9 370 aaPredicted RBP16.73■□□□□ 0.27
PKN1-208ENST00000586900 INSRP06213 1382 aa16.73■□□□□ 0.27
PKN1-208ENST00000586900 ERBB3P21860 1342 aa16.72■□□□□ 0.27
PKN1-208ENST00000586900 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
PKN1-208ENST00000586900 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
PKN1-208ENST00000586900 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
PKN1-208ENST00000586900 CRB1P82279 1406 aa16.71■□□□□ 0.27
PKN1-208ENST00000586900 RXRBP28702 533 aa16.71■□□□□ 0.27
PKN1-208ENST00000586900 ANKRD24Q8TF21 1146 aa16.71■□□□□ 0.27
PKN1-208ENST00000586900 PARD3Q8TEW0 1356 aa16.71■□□□□ 0.27
PKN1-208ENST00000586900 FAM208AQ9UK61 1670 aaKnown RBP16.7■□□□□ 0.26
PKN1-208ENST00000586900 RALBP1Q15311 655 aa16.7■□□□□ 0.26
PKN1-208ENST00000586900 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
PKN1-208ENST00000586900 LARP1Q6PKG0 1096 aaKnown RBP16.7■□□□□ 0.26
PKN1-208ENST00000586900 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
PKN1-208ENST00000586900 GLI3P10071 1580 aa16.69■□□□□ 0.26
PKN1-208ENST00000586900 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
PKN1-208ENST00000586900 PPM1GO15355 546 aaPredicted RBP16.69■□□□□ 0.26
PKN1-208ENST00000586900 CNGB1Q14028 1251 aaPredicted RBP16.69■□□□□ 0.26
PKN1-208ENST00000586900 CARD10Q9BWT7 1032 aa16.69■□□□□ 0.26
PKN1-208ENST00000586900 THRAP3Q9Y2W1 955 aaKnown RBP16.69■□□□□ 0.26
PKN1-208ENST00000586900 CCDC9Q9Y3X0 531 aaKnown RBP16.69■□□□□ 0.26
PKN1-208ENST00000586900 CSB-PGBD3P0DP91 1061 aa16.68■□□□□ 0.26
PKN1-208ENST00000586900 MTHFSP49914 203 aa16.68■□□□□ 0.26
PKN1-208ENST00000586900 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
PKN1-208ENST00000586900 ONECUT3O60422 494 aaPredicted RBP16.67■□□□□ 0.26
PKN1-208ENST00000586900 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
PKN1-208ENST00000586900 BARGINQ6ZT62 677 aa16.66■□□□□ 0.26
PKN1-208ENST00000586900 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
PKN1-208ENST00000586900 LTV1Q96GA3 475 aaPredicted RBP16.65■□□□□ 0.26
PKN1-208ENST00000586900 PRKRIP1Q9H875 184 aaPredicted RBP16.64■□□□□ 0.25
PKN1-208ENST00000586900 NLRP2Q9NX02 1062 aa16.64■□□□□ 0.25
PKN1-208ENST00000586900 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
PKN1-208ENST00000586900 CDCA7Q9BWT1 371 aaPredicted RBP16.63■□□□□ 0.25
PKN1-208ENST00000586900 RGPD2P0DJD1 1756 aa16.62■□□□□ 0.25
PKN1-208ENST00000586900 FAM98CQ17RN3 349 aaKnown RBP16.62■□□□□ 0.25
PKN1-208ENST00000586900 NBPF6Q5VWK0 638 aa16.62■□□□□ 0.25
PKN1-208ENST00000586900 NBPF4Q96M43 638 aa16.62■□□□□ 0.25
PKN1-208ENST00000586900 USP35Q9P2H5 1018 aa16.62■□□□□ 0.25
PKN1-208ENST00000586900 NCAPD2Q15021 1401 aa16.62■□□□□ 0.25
PKN1-208ENST00000586900 CFAP53Q96M91 514 aa16.61■□□□□ 0.25
PKN1-208ENST00000586900 THSD7AQ9UPZ6 1657 aa16.61■□□□□ 0.25
PKN1-208ENST00000586900 MYBBP1AQ9BQG0 1328 aaKnown RBP16.61■□□□□ 0.25
PKN1-208ENST00000586900 IL13P35225 146 aa16.6■□□□□ 0.25
PKN1-208ENST00000586900 EYA1Q99502 592 aa16.6■□□□□ 0.25
PKN1-208ENST00000586900 WNK3Q9BYP7 1800 aa16.6■□□□□ 0.25
PKN1-208ENST00000586900 DISP2A7MBM2 1401 aa16.6■□□□□ 0.25
PKN1-208ENST00000586900 RGS12O14924 1447 aa16.6■□□□□ 0.25
PKN1-208ENST00000586900 COL3A1P02461 1466 aaPredicted RBP16.6■□□□□ 0.25
PKN1-208ENST00000586900 DIAPH1O60610 1272 aaKnown RBP16.59■□□□□ 0.25
PKN1-208ENST00000586900 SEPT12Q8IYM1 358 aa16.59■□□□□ 0.25
PKN1-208ENST00000586900 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
PKN1-208ENST00000586900 ANP32CO43423 234 aa16.58■□□□□ 0.24
PKN1-208ENST00000586900 IGSF1Q8N6C5 1336 aa16.58■□□□□ 0.24
PKN1-208ENST00000586900 RGPD1P0DJD0 1748 aa16.57■□□□□ 0.24
PKN1-208ENST00000586900 IL2RBP14784 551 aa16.57■□□□□ 0.24
PKN1-208ENST00000586900 PLEKHG2Q9H7P9 1386 aa16.56■□□□□ 0.24
PKN1-208ENST00000586900 USHBP1Q8N6Y0 703 aa16.55■□□□□ 0.24
PKN1-208ENST00000586900 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
PKN1-208ENST00000586900 BRWD3Q6RI45 1802 aa16.54■□□□□ 0.24
PKN1-208ENST00000586900 KDRP35968 1356 aa16.54■□□□□ 0.24
PKN1-208ENST00000586900 A0A0G2JS52 829 aa16.54■□□□□ 0.24
PKN1-208ENST00000586900 MYT1Q01538 1121 aa16.54■□□□□ 0.24
PKN1-208ENST00000586900 DDB1Q16531 1140 aa16.54■□□□□ 0.24
PKN1-208ENST00000586900 ILDR2Q71H61 639 aa16.54■□□□□ 0.24
PKN1-208ENST00000586900 RAPGEF4Q8WZA2 1011 aa16.54■□□□□ 0.24
PKN1-208ENST00000586900 EXOC5O00471 708 aa16.53■□□□□ 0.24
PKN1-208ENST00000586900 TATP17735 454 aaPredicted RBP16.53■□□□□ 0.24
PKN1-208ENST00000586900 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
PKN1-208ENST00000586900 LRRC37A3O60309 1634 aa16.52■□□□□ 0.24
PKN1-208ENST00000586900 MEGF6O75095 1541 aa16.52■□□□□ 0.24
PKN1-208ENST00000586900 PDE3BQ13370 1112 aa16.52■□□□□ 0.24
PKN1-208ENST00000586900 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.24
PKN1-208ENST00000586900 TNS2Q63HR2 1409 aa16.52■□□□□ 0.23
PKN1-208ENST00000586900 SULT6B1Q6IMI4 303 aa16.51■□□□□ 0.23
PKN1-208ENST00000586900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms