RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 SBF2Q86WG5 1849 aa19.97■□□□□ 0.79
ATG4D-206ENST00000586863 KTN1Q86UP2 1357 aaKnown RBP19.97■□□□□ 0.79
ATG4D-206ENST00000586863 SOX12O15370 315 aa19.97■□□□□ 0.79
ATG4D-206ENST00000586863 ARHGEF25Q86VW2 580 aa19.97■□□□□ 0.79
ATG4D-206ENST00000586863 CARD11Q9BXL7 1154 aa19.97■□□□□ 0.79
ATG4D-206ENST00000586863 TOM1L2Q6ZVM7 507 aa19.96■□□□□ 0.79
ATG4D-206ENST00000586863 CD163L1Q9NR16 1453 aa19.96■□□□□ 0.79
ATG4D-206ENST00000586863 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
ATG4D-206ENST00000586863 OVOS2A0A0G2JMS6 1433 aa19.95■□□□□ 0.78
ATG4D-206ENST00000586863 OVOS2A0A0J9YW53 1432 aa19.95■□□□□ 0.78
ATG4D-206ENST00000586863 OVOS2Q6IE36 1432 aa19.95■□□□□ 0.78
ATG4D-206ENST00000586863 USP54Q70EL1 1684 aa19.95■□□□□ 0.78
ATG4D-206ENST00000586863 KCNH5Q8NCM2 988 aa19.95■□□□□ 0.78
ATG4D-206ENST00000586863 TONSLQ96HA7 1378 aa19.94■□□□□ 0.78
ATG4D-206ENST00000586863 ABCC6O95255 1503 aa19.92■□□□□ 0.78
ATG4D-206ENST00000586863 DDB1Q16531 1140 aa19.91■□□□□ 0.78
ATG4D-206ENST00000586863 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.91■□□□□ 0.78
ATG4D-206ENST00000586863 RGPD3A6NKT7 1758 aaPredicted RBP19.9■□□□□ 0.78
ATG4D-206ENST00000586863 LTN1O94822 1766 aa19.9■□□□□ 0.78
ATG4D-206ENST00000586863 RGPD4Q7Z3J3 1758 aa19.9■□□□□ 0.78
ATG4D-206ENST00000586863 USP31Q70CQ4 1352 aa19.9■□□□□ 0.78
ATG4D-206ENST00000586863 CSB-PGBD3P0DP91 1061 aa19.89■□□□□ 0.77
ATG4D-206ENST00000586863 NME9Q86XW9 330 aa19.89■□□□□ 0.77
ATG4D-206ENST00000586863 CARD10Q9BWT7 1032 aa19.89■□□□□ 0.77
ATG4D-206ENST00000586863 C11orf95C9JLR9 678 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-206ENST00000586863 TMC1Q8TDI8 760 aa19.88■□□□□ 0.77
ATG4D-206ENST00000586863 MARCH10Q8NA82 808 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-206ENST00000586863 CDCA7Q9BWT1 371 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-206ENST00000586863 SLC12A5Q9H2X9 1139 aa19.87■□□□□ 0.77
ATG4D-206ENST00000586863 A0A1W2PP64 1363 aa19.86■□□□□ 0.77
ATG4D-206ENST00000586863 PTF1AQ7RTS3 328 aa19.86■□□□□ 0.77
ATG4D-206ENST00000586863 EDC4Q6P2E9 1401 aaKnown RBP19.85■□□□□ 0.77
ATG4D-206ENST00000586863 BCL9O00512 1426 aa19.85■□□□□ 0.77
ATG4D-206ENST00000586863 CCDC7Q96M83 1385 aa19.84■□□□□ 0.77
ATG4D-206ENST00000586863 NBPF14Q5TI25 921 aa19.84■□□□□ 0.77
ATG4D-206ENST00000586863 HDGFL2Q7Z4V5 671 aaPredicted RBP19.84■□□□□ 0.77
ATG4D-206ENST00000586863 BCL11BQ9C0K0 894 aaPredicted RBP19.83■□□□□ 0.77
ATG4D-206ENST00000586863 TNS2Q63HR2 1409 aa19.83■□□□□ 0.76
ATG4D-206ENST00000586863 ERBB3P21860 1342 aa19.82■□□□□ 0.76
ATG4D-206ENST00000586863 TESK2Q96S53 571 aa19.82■□□□□ 0.76
ATG4D-206ENST00000586863 PLSCR1O15162 318 aa19.81■□□□□ 0.76
ATG4D-206ENST00000586863 PUS7Q96PZ0 661 aaKnown RBP19.8■□□□□ 0.76
ATG4D-206ENST00000586863 TERF2IPQ9NYB0 399 aa19.8■□□□□ 0.76
ATG4D-206ENST00000586863 KAT6BQ8WYB5 2073 aa19.79■□□□□ 0.76
ATG4D-206ENST00000586863 ST20-MTHFSA0A0A6YYL1 179 aa19.79■□□□□ 0.76
ATG4D-206ENST00000586863 EXOC5O00471 708 aa19.79■□□□□ 0.76
ATG4D-206ENST00000586863 ANO8Q9HCE9 1232 aaPredicted RBP19.79■□□□□ 0.76
ATG4D-206ENST00000586863 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
ATG4D-206ENST00000586863 NHSQ6T4R5 1651 aa19.78■□□□□ 0.76
ATG4D-206ENST00000586863 CASZ1Q86V15 1759 aa19.78■□□□□ 0.76
ATG4D-206ENST00000586863 ANKRD24Q8TF21 1146 aa19.77■□□□□ 0.76
ATG4D-206ENST00000586863 NINLQ9Y2I6 1382 aa19.77■□□□□ 0.76
ATG4D-206ENST00000586863 PROM2Q8N271 834 aa19.76■□□□□ 0.75
ATG4D-206ENST00000586863 KCNQ2O43526 872 aa19.74■□□□□ 0.75
ATG4D-206ENST00000586863 TRIM26Q12899 539 aaPredicted RBP19.74■□□□□ 0.75
ATG4D-206ENST00000586863 FAM208AQ9UK61 1670 aaKnown RBP19.74■□□□□ 0.75
ATG4D-206ENST00000586863 IL2RBP14784 551 aa19.73■□□□□ 0.75
ATG4D-206ENST00000586863 BTAF1O14981 1849 aa19.72■□□□□ 0.75
ATG4D-206ENST00000586863 SPON1Q9HCB6 807 aa19.72■□□□□ 0.75
ATG4D-206ENST00000586863 TXNRD1Q16881 649 aa19.71■□□□□ 0.75
ATG4D-206ENST00000586863 IP6K1Q92551 441 aa19.71■□□□□ 0.75
ATG4D-206ENST00000586863 ACSBG1Q96GR2 724 aa19.71■□□□□ 0.75
ATG4D-206ENST00000586863 PDGFDQ9GZP0 370 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-206ENST00000586863 ANKRD36BQ8N2N9 1353 aa19.7■□□□□ 0.74
ATG4D-206ENST00000586863 USP47Q96K76 1375 aa19.7■□□□□ 0.74
ATG4D-206ENST00000586863 RGPD2P0DJD1 1756 aa19.7■□□□□ 0.74
ATG4D-206ENST00000586863 FBLN1P23142 703 aa19.69■□□□□ 0.74
ATG4D-206ENST00000586863 LTV1Q96GA3 475 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-206ENST00000586863 COG3Q96JB2 828 aa19.69■□□□□ 0.74
ATG4D-206ENST00000586863 MAP3K19Q56UN5 1328 aa19.69■□□□□ 0.74
ATG4D-206ENST00000586863 PAPPAQ13219 1627 aa19.67■□□□□ 0.74
ATG4D-206ENST00000586863 SLC24A1O60721 1099 aa19.67■□□□□ 0.74
ATG4D-206ENST00000586863 PPP1R1BQ9UD71 204 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-206ENST00000586863 UTRNP46939 3433 aa19.67■□□□□ 0.74
ATG4D-206ENST00000586863 HOXC9P31274 260 aa19.66■□□□□ 0.74
ATG4D-206ENST00000586863 MYOM1P52179 1685 aa19.65■□□□□ 0.74
ATG4D-206ENST00000586863 SHANK3Q9BYB0 1731 aa19.65■□□□□ 0.74
ATG4D-206ENST00000586863 KIF20BQ96Q89 1820 aa19.65■□□□□ 0.74
ATG4D-206ENST00000586863 ZBTB7AO95365 584 aa19.65■□□□□ 0.74
ATG4D-206ENST00000586863 TMF1P82094 1093 aa19.65■□□□□ 0.74
ATG4D-206ENST00000586863 STK32BQ9NY57 414 aa19.65■□□□□ 0.74
ATG4D-206ENST00000586863 SLC15A2Q16348 729 aa19.64■□□□□ 0.73
ATG4D-206ENST00000586863 AMPHP49418 695 aa19.63■□□□□ 0.73
ATG4D-206ENST00000586863 MEGF6O75095 1541 aa19.62■□□□□ 0.73
ATG4D-206ENST00000586863 RTL1A6NKG5 1358 aa19.62■□□□□ 0.73
ATG4D-206ENST00000586863 FYB1O15117 783 aa19.62■□□□□ 0.73
ATG4D-206ENST00000586863 RRS1Q15050 365 aaKnown RBP19.62■□□□□ 0.73
ATG4D-206ENST00000586863 GGNBP2Q9H3C7 697 aa19.62■□□□□ 0.73
ATG4D-206ENST00000586863 DOT1LQ8TEK3 1739 aa19.62■□□□□ 0.73
ATG4D-206ENST00000586863 PTGER2P43116 358 aa19.61■□□□□ 0.73
ATG4D-206ENST00000586863 DDX54Q8TDD1 881 aaKnown RBP19.61■□□□□ 0.73
ATG4D-206ENST00000586863 ATF5Q9Y2D1 282 aaPredicted RBP19.59■□□□□ 0.73
ATG4D-206ENST00000586863 LRRC4BQ9NT99 713 aa19.58■□□□□ 0.72
ATG4D-206ENST00000586863 ZNF827Q17R98 1081 aa19.57■□□□□ 0.72
ATG4D-206ENST00000586863 NBPF6Q5VWK0 638 aa19.56■□□□□ 0.72
ATG4D-206ENST00000586863 NBPF4Q96M43 638 aa19.56■□□□□ 0.72
ATG4D-206ENST00000586863 NSD2O96028 1365 aa19.56■□□□□ 0.72
ATG4D-206ENST00000586863 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
ATG4D-206ENST00000586863 LY75O60449 1722 aa19.55■□□□□ 0.72
ATG4D-206ENST00000586863 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms