RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CC2D1BQ5T0F9 858 aaKnown RBP26.09■■□□□ 1.77
DDX39A-204ENST00000586558 ATRNO75882 1429 aa26.08■■□□□ 1.77
DDX39A-204ENST00000586558 BLMP54132 1417 aaPredicted RBP26.08■■□□□ 1.77
DDX39A-204ENST00000586558 TRPC5Q9UL62 973 aaPredicted RBP26.08■■□□□ 1.77
DDX39A-204ENST00000586558 COL5A2P05997 1499 aaPredicted RBP26.07■■□□□ 1.76
DDX39A-204ENST00000586558 FBLN1P23142 703 aa26.07■■□□□ 1.76
DDX39A-204ENST00000586558 RRS1Q15050 365 aaKnown RBP26.07■■□□□ 1.76
DDX39A-204ENST00000586558 IP6K1Q92551 441 aa26.07■■□□□ 1.76
DDX39A-204ENST00000586558 AMPHP49418 695 aa26.06■■□□□ 1.76
DDX39A-204ENST00000586558 VPS72Q15906 364 aa26.06■■□□□ 1.76
DDX39A-204ENST00000586558 QTRT2Q9H974 415 aaKnown RBP26.06■■□□□ 1.76
DDX39A-204ENST00000586558 TNNT2P45379 298 aaPredicted RBP26.05■■□□□ 1.76
DDX39A-204ENST00000586558 AXIN2Q9Y2T1 843 aa26.05■■□□□ 1.76
DDX39A-204ENST00000586558 FLT4P35916 1363 aa26.05■■□□□ 1.76
DDX39A-204ENST00000586558 EVA1CP58658 441 aa26.04■■□□□ 1.76
DDX39A-204ENST00000586558 SMG6Q86US8 1419 aaKnown RBP26.04■■□□□ 1.76
DDX39A-204ENST00000586558 HOXC9P31274 260 aa26.03■■□□□ 1.76
DDX39A-204ENST00000586558 POLKQ9UBT6 870 aa26.03■■□□□ 1.76
DDX39A-204ENST00000586558 POTEAQ6S8J7 498 aa26.02■■□□□ 1.76
DDX39A-204ENST00000586558 STRN4Q9NRL3 753 aa26.02■■□□□ 1.76
DDX39A-204ENST00000586558 EMILIN1Q9Y6C2 1016 aa26.02■■□□□ 1.76
DDX39A-204ENST00000586558 WDR17Q8IZU2 1322 aa26.01■■□□□ 1.75
DDX39A-204ENST00000586558 INSRP06213 1382 aa26■■□□□ 1.75
DDX39A-204ENST00000586558 ERBB3P21860 1342 aa26■■□□□ 1.75
DDX39A-204ENST00000586558 PEAK1Q9H792 1746 aa26■■□□□ 1.75
DDX39A-204ENST00000586558 SOCS7O14512 581 aa25.99■■□□□ 1.75
DDX39A-204ENST00000586558 RBM6P78332 1123 aaKnown RBP25.99■■□□□ 1.75
DDX39A-204ENST00000586558 GJD4Q96KN9 370 aaPredicted RBP25.99■■□□□ 1.75
DDX39A-204ENST00000586558 CRB1P82279 1406 aa25.98■■□□□ 1.75
DDX39A-204ENST00000586558 SPATA31A5Q5VU36 1347 aa25.98■■□□□ 1.75
DDX39A-204ENST00000586558 SPATA31A7Q8IWB4 1347 aa25.98■■□□□ 1.75
DDX39A-204ENST00000586558 CNGB1Q14028 1251 aaPredicted RBP25.98■■□□□ 1.75
DDX39A-204ENST00000586558 CCDC9Q9Y3X0 531 aaKnown RBP25.98■■□□□ 1.75
DDX39A-204ENST00000586558 PARD3Q8TEW0 1356 aa25.97■■□□□ 1.75
DDX39A-204ENST00000586558 PPM1GO15355 546 aaPredicted RBP25.97■■□□□ 1.75
DDX39A-204ENST00000586558 RXRBP28702 533 aa25.97■■□□□ 1.75
DDX39A-204ENST00000586558 LARP1Q6PKG0 1096 aaKnown RBP25.97■■□□□ 1.75
DDX39A-204ENST00000586558 ANKRD24Q8TF21 1146 aa25.97■■□□□ 1.75
DDX39A-204ENST00000586558 MAP2P11137 1827 aaKnown RBP25.97■■□□□ 1.75
DDX39A-204ENST00000586558 CDK12Q9NYV4 1490 aaPredicted RBP25.97■■□□□ 1.75
DDX39A-204ENST00000586558 CSB-PGBD3P0DP91 1061 aa25.96■■□□□ 1.75
DDX39A-204ENST00000586558 RGPD5Q99666 1765 aa25.95■■□□□ 1.75
DDX39A-204ENST00000586558 SPATA31A1Q5TZJ5 1347 aa25.95■■□□□ 1.75
DDX39A-204ENST00000586558 HSP90AB2PQ58FF8 381 aa25.94■■□□□ 1.74
DDX39A-204ENST00000586558 TOM1L2Q6ZVM7 507 aa25.94■■□□□ 1.74
DDX39A-204ENST00000586558 GLI3P10071 1580 aa25.94■■□□□ 1.74
DDX39A-204ENST00000586558 FAM208AQ9UK61 1670 aaKnown RBP25.93■■□□□ 1.74
DDX39A-204ENST00000586558 RALBP1Q15311 655 aa25.93■■□□□ 1.74
DDX39A-204ENST00000586558 CARD10Q9BWT7 1032 aa25.92■■□□□ 1.74
DDX39A-204ENST00000586558 THRAP3Q9Y2W1 955 aaKnown RBP25.92■■□□□ 1.74
DDX39A-204ENST00000586558 MTHFSP49914 203 aa25.91■■□□□ 1.74
DDX39A-204ENST00000586558 TCP11L2Q8N4U5 519 aa25.9■■□□□ 1.74
DDX39A-204ENST00000586558 LTV1Q96GA3 475 aaPredicted RBP25.9■■□□□ 1.74
DDX39A-204ENST00000586558 NLRP2Q9NX02 1062 aa25.9■■□□□ 1.74
DDX39A-204ENST00000586558 PPP2R1AP30153 589 aa25.89■■□□□ 1.74
DDX39A-204ENST00000586558 BARGINQ6ZT62 677 aa25.88■■□□□ 1.73
DDX39A-204ENST00000586558 ONECUT3O60422 494 aaPredicted RBP25.87■■□□□ 1.73
DDX39A-204ENST00000586558 USP35Q9P2H5 1018 aa25.87■■□□□ 1.73
DDX39A-204ENST00000586558 FAM98CQ17RN3 349 aaKnown RBP25.85■■□□□ 1.73
DDX39A-204ENST00000586558 RGS12O14924 1447 aa25.84■■□□□ 1.73
DDX39A-204ENST00000586558 EIF4A2Q14240 407 aaKnown RBP25.84■■□□□ 1.73
DDX39A-204ENST00000586558 PRKRIP1Q9H875 184 aaPredicted RBP25.84■■□□□ 1.73
DDX39A-204ENST00000586558 CFAP53Q96M91 514 aa25.83■■□□□ 1.73
DDX39A-204ENST00000586558 CDCA7Q9BWT1 371 aaPredicted RBP25.83■■□□□ 1.73
DDX39A-204ENST00000586558 THSD7AQ9UPZ6 1657 aa25.82■■□□□ 1.72
DDX39A-204ENST00000586558 MYBBP1AQ9BQG0 1328 aaKnown RBP25.82■■□□□ 1.72
DDX39A-204ENST00000586558 NBPF6Q5VWK0 638 aa25.81■■□□□ 1.72
DDX39A-204ENST00000586558 NBPF4Q96M43 638 aa25.81■■□□□ 1.72
DDX39A-204ENST00000586558 NCAPD2Q15021 1401 aa25.8■■□□□ 1.72
DDX39A-204ENST00000586558 COL3A1P02461 1466 aaPredicted RBP25.8■■□□□ 1.72
DDX39A-204ENST00000586558 DISP2A7MBM2 1401 aa25.8■■□□□ 1.72
DDX39A-204ENST00000586558 SEPT12Q8IYM1 358 aa25.79■■□□□ 1.72
DDX39A-204ENST00000586558 A0A0G2JS52 829 aa25.78■■□□□ 1.72
DDX39A-204ENST00000586558 DIAPH1O60610 1272 aaKnown RBP25.78■■□□□ 1.72
DDX39A-204ENST00000586558 IL13P35225 146 aa25.78■■□□□ 1.72
DDX39A-204ENST00000586558 MYT1Q01538 1121 aa25.78■■□□□ 1.72
DDX39A-204ENST00000586558 EYA1Q99502 592 aa25.78■■□□□ 1.72
DDX39A-204ENST00000586558 IGSF1Q8N6C5 1336 aa25.77■■□□□ 1.72
DDX39A-204ENST00000586558 WNK3Q9BYP7 1800 aa25.77■■□□□ 1.72
DDX39A-204ENST00000586558 IL2RBP14784 551 aa25.76■■□□□ 1.71
DDX39A-204ENST00000586558 ANP32CO43423 234 aa25.75■■□□□ 1.71
DDX39A-204ENST00000586558 RGPD2P0DJD1 1756 aa25.74■■□□□ 1.71
DDX39A-204ENST00000586558 PARP4Q9UKK3 1724 aaKnown RBP25.74■■□□□ 1.71
DDX39A-204ENST00000586558 USHBP1Q8N6Y0 703 aa25.74■■□□□ 1.71
DDX39A-204ENST00000586558 RAPGEF4Q8WZA2 1011 aa25.73■■□□□ 1.71
DDX39A-204ENST00000586558 RGPD1P0DJD0 1748 aa25.73■■□□□ 1.71
DDX39A-204ENST00000586558 PLEKHG2Q9H7P9 1386 aa25.72■■□□□ 1.71
DDX39A-204ENST00000586558 NUDCQ9Y266 331 aa25.71■■□□□ 1.71
DDX39A-204ENST00000586558 OVOS2A0A0G2JMS6 1433 aa25.71■■□□□ 1.71
DDX39A-204ENST00000586558 LRRC37A3O60309 1634 aa25.7■■□□□ 1.71
DDX39A-204ENST00000586558 KDRP35968 1356 aa25.7■■□□□ 1.71
DDX39A-204ENST00000586558 MEGF6O75095 1541 aa25.7■■□□□ 1.7
DDX39A-204ENST00000586558 DDB1Q16531 1140 aa25.7■■□□□ 1.7
DDX39A-204ENST00000586558 TNS2Q63HR2 1409 aa25.7■■□□□ 1.7
DDX39A-204ENST00000586558 TATP17735 454 aaPredicted RBP25.69■■□□□ 1.7
DDX39A-204ENST00000586558 PDE3BQ13370 1112 aa25.68■■□□□ 1.7
DDX39A-204ENST00000586558 KRT27Q7Z3Y8 459 aa25.68■■□□□ 1.7
DDX39A-204ENST00000586558 EXOC5O00471 708 aa25.67■■□□□ 1.7
DDX39A-204ENST00000586558 U2SURPO15042 1029 aaKnown RBP25.66■■□□□ 1.7
DDX39A-204ENST00000586558 SULT6B1Q6IMI4 303 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms