RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 ARHGEF25Q86VW2 580 aa15.81■□□□□ 0.12
ACTN4-209ENST00000586538 WDR17Q8IZU2 1322 aa15.81■□□□□ 0.12
ACTN4-209ENST00000586538 CSB-PGBD3P0DP91 1061 aa15.8■□□□□ 0.12
ACTN4-209ENST00000586538 CDCA8Q53HL2 280 aa15.8■□□□□ 0.12
ACTN4-209ENST00000586538 TNS1Q9HBL0 1735 aaKnown RBP15.8■□□□□ 0.12
ACTN4-209ENST00000586538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.79■□□□□ 0.12
ACTN4-209ENST00000586538 NFAT5O94916 1531 aa15.78■□□□□ 0.12
ACTN4-209ENST00000586538 OVOS2A0A0G2JMS6 1433 aa15.78■□□□□ 0.12
ACTN4-209ENST00000586538 OVOS2A0A0J9YW53 1432 aa15.78■□□□□ 0.12
ACTN4-209ENST00000586538 OVOS2Q6IE36 1432 aa15.78■□□□□ 0.12
ACTN4-209ENST00000586538 COL18A1P39060 1754 aa15.78■□□□□ 0.12
ACTN4-209ENST00000586538 ST20-MTHFSA0A0A6YYL1 179 aa15.78■□□□□ 0.12
ACTN4-209ENST00000586538 DDB1Q16531 1140 aa15.78■□□□□ 0.12
ACTN4-209ENST00000586538 CD163L1Q9NR16 1453 aa15.78■□□□□ 0.12
ACTN4-209ENST00000586538 A0A1W2PP64 1363 aa15.77■□□□□ 0.12
ACTN4-209ENST00000586538 CCDC7Q96M83 1385 aa15.77■□□□□ 0.12
ACTN4-209ENST00000586538 SOX12O15370 315 aa15.77■□□□□ 0.12
ACTN4-209ENST00000586538 TRIM37O94972 964 aa15.77■□□□□ 0.12
ACTN4-209ENST00000586538 TMF1P82094 1093 aa15.77■□□□□ 0.12
ACTN4-209ENST00000586538 FAM182BQ5T319 152 aa15.77■□□□□ 0.12
ACTN4-209ENST00000586538 WNK3Q9BYP7 1800 aa15.76■□□□□ 0.11
ACTN4-209ENST00000586538 EN1Q05925 392 aaPredicted RBP15.76■□□□□ 0.11
ACTN4-209ENST00000586538 SLC12A5Q9H2X9 1139 aa15.76■□□□□ 0.11
ACTN4-209ENST00000586538 LRRC37A3O60309 1634 aa15.76■□□□□ 0.11
ACTN4-209ENST00000586538 USP47Q96K76 1375 aa15.75■□□□□ 0.11
ACTN4-209ENST00000586538 APBA3O96018 575 aa15.75■□□□□ 0.11
ACTN4-209ENST00000586538 TESK2Q96S53 571 aa15.75■□□□□ 0.11
ACTN4-209ENST00000586538 CARD10Q9BWT7 1032 aa15.75■□□□□ 0.11
ACTN4-209ENST00000586538 ANKRD36BQ8N2N9 1353 aa15.74■□□□□ 0.11
ACTN4-209ENST00000586538 LTN1O94822 1766 aa15.73■□□□□ 0.11
ACTN4-209ENST00000586538 NME9Q86XW9 330 aa15.73■□□□□ 0.11
ACTN4-209ENST00000586538 AXIN2Q9Y2T1 843 aa15.73■□□□□ 0.11
ACTN4-209ENST00000586538 LRP5O75197 1615 aa15.72■□□□□ 0.11
ACTN4-209ENST00000586538 NBPF14Q5TI25 921 aa15.72■□□□□ 0.11
ACTN4-209ENST00000586538 COG3Q96JB2 828 aa15.72■□□□□ 0.11
ACTN4-209ENST00000586538 RGPD5Q99666 1765 aa15.72■□□□□ 0.11
ACTN4-209ENST00000586538 ERBB3P21860 1342 aa15.71■□□□□ 0.11
ACTN4-209ENST00000586538 BCL9O00512 1426 aa15.71■□□□□ 0.11
ACTN4-209ENST00000586538 EXOC5O00471 708 aa15.71■□□□□ 0.11
ACTN4-209ENST00000586538 CAMKK2Q96RR4 588 aa15.71■□□□□ 0.11
ACTN4-209ENST00000586538 RGPD3A6NKT7 1758 aaPredicted RBP15.71■□□□□ 0.11
ACTN4-209ENST00000586538 RGPD4Q7Z3J3 1758 aa15.71■□□□□ 0.11
ACTN4-209ENST00000586538 FAM208AQ9UK61 1670 aaKnown RBP15.7■□□□□ 0.1
ACTN4-209ENST00000586538 EZH2Q15910 746 aaKnown RBP15.7■□□□□ 0.1
ACTN4-209ENST00000586538 RREB1Q92766 1687 aa15.7■□□□□ 0.1
ACTN4-209ENST00000586538 PEAK1Q9H792 1746 aa15.69■□□□□ 0.1
ACTN4-209ENST00000586538 TNS2Q63HR2 1409 aa15.68■□□□□ 0.1
ACTN4-209ENST00000586538 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
ACTN4-209ENST00000586538 NLRP2Q9NX02 1062 aa15.68■□□□□ 0.1
ACTN4-209ENST00000586538 SRCAPQ6ZRS2 3230 aa15.67■□□□□ 0.1
ACTN4-209ENST00000586538 BCL11BQ9C0K0 894 aaPredicted RBP15.67■□□□□ 0.1
ACTN4-209ENST00000586538 RTL1A6NKG5 1358 aa15.66■□□□□ 0.1
ACTN4-209ENST00000586538 PSDA5PKW4 1024 aaPredicted RBP15.66■□□□□ 0.1
ACTN4-209ENST00000586538 PLSCR1O15162 318 aa15.66■□□□□ 0.1
ACTN4-209ENST00000586538 IL2RBP14784 551 aa15.66■□□□□ 0.1
ACTN4-209ENST00000586538 ANKRD24Q8TF21 1146 aa15.66■□□□□ 0.1
ACTN4-209ENST00000586538 SBF2Q86WG5 1849 aa15.66■□□□□ 0.1
ACTN4-209ENST00000586538 R3HDM1Q15032 1099 aaKnown RBP15.65■□□□□ 0.1
ACTN4-209ENST00000586538 IP6K1Q92551 441 aa15.65■□□□□ 0.1
ACTN4-209ENST00000586538 SMG6Q86US8 1419 aaKnown RBP15.65■□□□□ 0.1
ACTN4-209ENST00000586538 NUP188Q5SRE5 1749 aa15.65■□□□□ 0.1
ACTN4-209ENST00000586538 AMPHP49418 695 aa15.64■□□□□ 0.09
ACTN4-209ENST00000586538 MARCH10Q8NA82 808 aaPredicted RBP15.63■□□□□ 0.09
ACTN4-209ENST00000586538 KIF20BQ96Q89 1820 aa15.62■□□□□ 0.09
ACTN4-209ENST00000586538 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
ACTN4-209ENST00000586538 CCER1Q8TC90 406 aaPredicted RBP15.61■□□□□ 0.09
ACTN4-209ENST00000586538 HOXC9P31274 260 aa15.6■□□□□ 0.09
ACTN4-209ENST00000586538 MAP3K19Q56UN5 1328 aa15.6■□□□□ 0.09
ACTN4-209ENST00000586538 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
ACTN4-209ENST00000586538 FYB1O15117 783 aa15.58■□□□□ 0.08
ACTN4-209ENST00000586538 CGNL1Q0VF96 1302 aa15.58■□□□□ 0.08
ACTN4-209ENST00000586538 MYOM1P52179 1685 aa15.57■□□□□ 0.08
ACTN4-209ENST00000586538 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.08
ACTN4-209ENST00000586538 LTV1Q96GA3 475 aaPredicted RBP15.57■□□□□ 0.08
ACTN4-209ENST00000586538 GGNBP2Q9H3C7 697 aa15.57■□□□□ 0.08
ACTN4-209ENST00000586538 FLT4P35916 1363 aa15.57■□□□□ 0.08
ACTN4-209ENST00000586538 NSD3Q9BZ95 1437 aa15.56■□□□□ 0.08
ACTN4-209ENST00000586538 HMGB2P26583 209 aaKnown RBP15.54■□□□□ 0.08
ACTN4-209ENST00000586538 RRS1Q15050 365 aaKnown RBP15.54■□□□□ 0.08
ACTN4-209ENST00000586538 TXNRD1Q16881 649 aa15.54■□□□□ 0.08
ACTN4-209ENST00000586538 SPON1Q9HCB6 807 aa15.54■□□□□ 0.08
ACTN4-209ENST00000586538 STK32BQ9NY57 414 aa15.54■□□□□ 0.08
ACTN4-209ENST00000586538 INSRP06213 1382 aa15.53■□□□□ 0.08
ACTN4-209ENST00000586538 RAPGEF4Q8WZA2 1011 aa15.53■□□□□ 0.08
ACTN4-209ENST00000586538 ZCRB1Q8TBF4 217 aaKnown RBP15.52■□□□□ 0.08
ACTN4-209ENST00000586538 PPP1R1BQ9UD71 204 aaPredicted RBP15.52■□□□□ 0.08
ACTN4-209ENST00000586538 KCNQ2O43526 872 aa15.51■□□□□ 0.07
ACTN4-209ENST00000586538 DDX54Q8TDD1 881 aaKnown RBP15.51■□□□□ 0.07
ACTN4-209ENST00000586538 ACSBG1Q96GR2 724 aa15.51■□□□□ 0.07
ACTN4-209ENST00000586538 TATP17735 454 aaPredicted RBP15.5■□□□□ 0.07
ACTN4-209ENST00000586538 POLR3GLQ9BT43 218 aa15.5■□□□□ 0.07
ACTN4-209ENST00000586538 BTAF1O14981 1849 aa15.5■□□□□ 0.07
ACTN4-209ENST00000586538 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
ACTN4-209ENST00000586538 SLC27A3Q5K4L6 730 aa15.49■□□□□ 0.07
ACTN4-209ENST00000586538 NSD2O96028 1365 aa15.49■□□□□ 0.07
ACTN4-209ENST00000586538 KAT6BQ8WYB5 2073 aa15.48■□□□□ 0.07
ACTN4-209ENST00000586538 PCDH11XQ9BZA7 1347 aa15.48■□□□□ 0.07
ACTN4-209ENST00000586538 PCDH11YQ9BZA8 1340 aa15.48■□□□□ 0.07
ACTN4-209ENST00000586538 SLC15A2Q16348 729 aa15.48■□□□□ 0.07
ACTN4-209ENST00000586538 CARD14Q9BXL6 1004 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms