RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 CD163L1Q9NR16 1453 aa23.89■■□□□ 1.42
TRIM47-203ENST00000586495 COL18A1P39060 1754 aa23.89■■□□□ 1.42
TRIM47-203ENST00000586495 TESK2Q96S53 571 aa23.89■■□□□ 1.41
TRIM47-203ENST00000586495 DISP2A7MBM2 1401 aa23.89■■□□□ 1.41
TRIM47-203ENST00000586495 EDC4Q6P2E9 1401 aaKnown RBP23.87■■□□□ 1.41
TRIM47-203ENST00000586495 CSB-PGBD3P0DP91 1061 aa23.87■■□□□ 1.41
TRIM47-203ENST00000586495 NME9Q86XW9 330 aa23.87■■□□□ 1.41
TRIM47-203ENST00000586495 NINLQ9Y2I6 1382 aa23.87■■□□□ 1.41
TRIM47-203ENST00000586495 APBA3O96018 575 aa23.86■■□□□ 1.41
TRIM47-203ENST00000586495 CDCA7Q9BWT1 371 aaPredicted RBP23.86■■□□□ 1.41
TRIM47-203ENST00000586495 NFAT5O94916 1531 aa23.85■■□□□ 1.41
TRIM47-203ENST00000586495 PARP4Q9UKK3 1724 aaKnown RBP23.85■■□□□ 1.41
TRIM47-203ENST00000586495 DDB1Q16531 1140 aa23.85■■□□□ 1.41
TRIM47-203ENST00000586495 A0A1W2PP64 1363 aa23.84■■□□□ 1.41
TRIM47-203ENST00000586495 CARD10Q9BWT7 1032 aa23.84■■□□□ 1.41
TRIM47-203ENST00000586495 TIMELESSQ9UNS1 1208 aa23.84■■□□□ 1.41
TRIM47-203ENST00000586495 TNS1Q9HBL0 1735 aaKnown RBP23.84■■□□□ 1.41
TRIM47-203ENST00000586495 EZH2Q15910 746 aaKnown RBP23.83■■□□□ 1.41
TRIM47-203ENST00000586495 ABCC6O95255 1503 aa23.83■■□□□ 1.41
TRIM47-203ENST00000586495 CAMKK2Q96RR4 588 aa23.82■■□□□ 1.4
TRIM47-203ENST00000586495 PARD3Q8TEW0 1356 aa23.81■■□□□ 1.4
TRIM47-203ENST00000586495 USP54Q70EL1 1684 aa23.81■■□□□ 1.4
TRIM47-203ENST00000586495 TMF1P82094 1093 aa23.81■■□□□ 1.4
TRIM47-203ENST00000586495 CLSPNQ9HAW4 1339 aa23.81■■□□□ 1.4
TRIM47-203ENST00000586495 OVOS2A0A0G2JMS6 1433 aa23.8■■□□□ 1.4
TRIM47-203ENST00000586495 OVOS2A0A0J9YW53 1432 aa23.8■■□□□ 1.4
TRIM47-203ENST00000586495 OVOS2Q6IE36 1432 aa23.8■■□□□ 1.4
TRIM47-203ENST00000586495 USP47Q96K76 1375 aa23.79■■□□□ 1.4
TRIM47-203ENST00000586495 CCDC7Q96M83 1385 aa23.79■■□□□ 1.4
TRIM47-203ENST00000586495 RGPD5Q99666 1765 aa23.79■■□□□ 1.4
TRIM47-203ENST00000586495 PSDA5PKW4 1024 aaPredicted RBP23.79■■□□□ 1.4
TRIM47-203ENST00000586495 PCGF6Q9BYE7 350 aa23.79■■□□□ 1.4
TRIM47-203ENST00000586495 EXOC5O00471 708 aa23.76■■□□□ 1.39
TRIM47-203ENST00000586495 CDCA8Q53HL2 280 aa23.76■■□□□ 1.39
TRIM47-203ENST00000586495 LRRC37A3O60309 1634 aa23.76■■□□□ 1.39
TRIM47-203ENST00000586495 ERBB3P21860 1342 aa23.75■■□□□ 1.39
TRIM47-203ENST00000586495 R3HDM1Q15032 1099 aaKnown RBP23.74■■□□□ 1.39
TRIM47-203ENST00000586495 COG3Q96JB2 828 aa23.74■■□□□ 1.39
TRIM47-203ENST00000586495 ANKRD36BQ8N2N9 1353 aa23.74■■□□□ 1.39
TRIM47-203ENST00000586495 NLRP2Q9NX02 1062 aa23.73■■□□□ 1.39
TRIM47-203ENST00000586495 WNK3Q9BYP7 1800 aa23.73■■□□□ 1.39
TRIM47-203ENST00000586495 MARCH10Q8NA82 808 aaPredicted RBP23.72■■□□□ 1.39
TRIM47-203ENST00000586495 ANKRD24Q8TF21 1146 aa23.72■■□□□ 1.39
TRIM47-203ENST00000586495 LTN1O94822 1766 aa23.71■■□□□ 1.39
TRIM47-203ENST00000586495 PEAK1Q9H792 1746 aa23.71■■□□□ 1.39
TRIM47-203ENST00000586495 NBPF14Q5TI25 921 aa23.71■■□□□ 1.39
TRIM47-203ENST00000586495 SRCAPQ6ZRS2 3230 aa23.71■■□□□ 1.39
TRIM47-203ENST00000586495 BCL9O00512 1426 aa23.7■■□□□ 1.38
TRIM47-203ENST00000586495 IP6K1Q92551 441 aa23.7■■□□□ 1.38
TRIM47-203ENST00000586495 BCL11BQ9C0K0 894 aaPredicted RBP23.7■■□□□ 1.38
TRIM47-203ENST00000586495 PLSCR1O15162 318 aa23.69■■□□□ 1.38
TRIM47-203ENST00000586495 LRP5O75197 1615 aa23.67■■□□□ 1.38
TRIM47-203ENST00000586495 IL2RBP14784 551 aa23.67■■□□□ 1.38
TRIM47-203ENST00000586495 RREB1Q92766 1687 aa23.66■■□□□ 1.38
TRIM47-203ENST00000586495 TNS2Q63HR2 1409 aa23.66■■□□□ 1.38
TRIM47-203ENST00000586495 SBF2Q86WG5 1849 aa23.66■■□□□ 1.38
TRIM47-203ENST00000586495 AMPHP49418 695 aa23.65■■□□□ 1.38
TRIM47-203ENST00000586495 MAP3K19Q56UN5 1328 aa23.64■■□□□ 1.38
TRIM47-203ENST00000586495 FYB1O15117 783 aa23.63■■□□□ 1.37
TRIM47-203ENST00000586495 LTV1Q96GA3 475 aaPredicted RBP23.62■■□□□ 1.37
TRIM47-203ENST00000586495 GGNBP2Q9H3C7 697 aa23.62■■□□□ 1.37
TRIM47-203ENST00000586495 NUP188Q5SRE5 1749 aa23.62■■□□□ 1.37
TRIM47-203ENST00000586495 HOXC9P31274 260 aa23.61■■□□□ 1.37
TRIM47-203ENST00000586495 PTF1AQ7RTS3 328 aa23.6■■□□□ 1.37
TRIM47-203ENST00000586495 RGPD3A6NKT7 1758 aaPredicted RBP23.6■■□□□ 1.37
TRIM47-203ENST00000586495 RGPD4Q7Z3J3 1758 aa23.6■■□□□ 1.37
TRIM47-203ENST00000586495 FBLN1P23142 703 aa23.59■■□□□ 1.37
TRIM47-203ENST00000586495 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
TRIM47-203ENST00000586495 RTL1A6NKG5 1358 aa23.57■■□□□ 1.36
TRIM47-203ENST00000586495 FAM208AQ9UK61 1670 aaKnown RBP23.57■■□□□ 1.36
TRIM47-203ENST00000586495 RRS1Q15050 365 aaKnown RBP23.56■■□□□ 1.36
TRIM47-203ENST00000586495 ACSBG1Q96GR2 724 aa23.55■■□□□ 1.36
TRIM47-203ENST00000586495 KCNQ2O43526 872 aa23.54■■□□□ 1.36
TRIM47-203ENST00000586495 PROM2Q8N271 834 aa23.53■■□□□ 1.36
TRIM47-203ENST00000586495 CARD14Q9BXL6 1004 aa23.53■■□□□ 1.36
TRIM47-203ENST00000586495 NSD3Q9BZ95 1437 aa23.52■■□□□ 1.36
TRIM47-203ENST00000586495 EIF4G2P78344 907 aaKnown RBP eCLIP23.52■■□□□ 1.36
TRIM47-203ENST00000586495 TXNRD1Q16881 649 aa23.52■■□□□ 1.36
TRIM47-203ENST00000586495 SMG6Q86US8 1419 aaKnown RBP23.51■■□□□ 1.35
TRIM47-203ENST00000586495 DDX54Q8TDD1 881 aaKnown RBP23.51■■□□□ 1.35
TRIM47-203ENST00000586495 KIF20BQ96Q89 1820 aa23.5■■□□□ 1.35
TRIM47-203ENST00000586495 KIF24Q5T7B8 1368 aa23.5■■□□□ 1.35
TRIM47-203ENST00000586495 MYOM1P52179 1685 aa23.49■■□□□ 1.35
TRIM47-203ENST00000586495 NHSQ6T4R5 1651 aa23.49■■□□□ 1.35
TRIM47-203ENST00000586495 POLR3GLQ9BT43 218 aa23.49■■□□□ 1.35
TRIM47-203ENST00000586495 SPON1Q9HCB6 807 aa23.49■■□□□ 1.35
TRIM47-203ENST00000586495 ANO8Q9HCE9 1232 aaPredicted RBP23.49■■□□□ 1.35
TRIM47-203ENST00000586495 KAT6BQ8WYB5 2073 aa23.48■■□□□ 1.35
TRIM47-203ENST00000586495 STK32BQ9NY57 414 aa23.48■■□□□ 1.35
TRIM47-203ENST00000586495 INSRP06213 1382 aa23.48■■□□□ 1.35
TRIM47-203ENST00000586495 FLT4P35916 1363 aa23.48■■□□□ 1.35
TRIM47-203ENST00000586495 NBPF6Q5VWK0 638 aa23.47■■□□□ 1.35
TRIM47-203ENST00000586495 ZCRB1Q8TBF4 217 aaKnown RBP23.47■■□□□ 1.35
TRIM47-203ENST00000586495 NBPF4Q96M43 638 aa23.47■■□□□ 1.35
TRIM47-203ENST00000586495 CGNL1Q0VF96 1302 aa23.47■■□□□ 1.35
TRIM47-203ENST00000586495 HSP90AB2PQ58FF8 381 aa23.46■■□□□ 1.35
TRIM47-203ENST00000586495 HSPA5P11021 654 aaKnown RBP23.45■■□□□ 1.34
TRIM47-203ENST00000586495 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.34
TRIM47-203ENST00000586495 SLC15A2Q16348 729 aa23.44■■□□□ 1.34
TRIM47-203ENST00000586495 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms