RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
ATG4D-205ENST00000586477 SOX12O15370 315 aa22.27■■□□□ 1.16
ATG4D-205ENST00000586477 BARGINQ6ZT62 677 aa22.27■■□□□ 1.16
ATG4D-205ENST00000586477 USP35Q9P2H5 1018 aa22.27■■□□□ 1.16
ATG4D-205ENST00000586477 OVOS2A0A0J9YW53 1432 aa22.26■■□□□ 1.15
ATG4D-205ENST00000586477 OVOS2Q6IE36 1432 aa22.26■■□□□ 1.15
ATG4D-205ENST00000586477 SF3B2Q13435 895 aaKnown RBP22.26■■□□□ 1.15
ATG4D-205ENST00000586477 KCNH5Q8NCM2 988 aa22.26■■□□□ 1.15
ATG4D-205ENST00000586477 TERF2IPQ9NYB0 399 aa22.26■■□□□ 1.15
ATG4D-205ENST00000586477 LTN1O94822 1766 aa22.25■■□□□ 1.15
ATG4D-205ENST00000586477 CRB1P82279 1406 aa22.25■■□□□ 1.15
ATG4D-205ENST00000586477 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-205ENST00000586477 MYOM1P52179 1685 aa22.25■■□□□ 1.15
ATG4D-205ENST00000586477 PARP4Q9UKK3 1724 aaKnown RBP22.25■■□□□ 1.15
ATG4D-205ENST00000586477 WNK3Q9BYP7 1800 aa22.24■■□□□ 1.15
ATG4D-205ENST00000586477 TCP11L2Q8N4U5 519 aa22.24■■□□□ 1.15
ATG4D-205ENST00000586477 DEFB132Q7Z7B7 95 aa22.23■■□□□ 1.15
ATG4D-205ENST00000586477 ABCC6O95255 1503 aa22.22■■□□□ 1.15
ATG4D-205ENST00000586477 TNS1Q9HBL0 1735 aaKnown RBP22.22■■□□□ 1.15
ATG4D-205ENST00000586477 ANKRD36BQ8N2N9 1353 aa22.22■■□□□ 1.15
ATG4D-205ENST00000586477 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
ATG4D-205ENST00000586477 KIF7Q2M1P5 1343 aa22.21■■□□□ 1.15
ATG4D-205ENST00000586477 WDR17Q8IZU2 1322 aa22.21■■□□□ 1.15
ATG4D-205ENST00000586477 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.14
ATG4D-205ENST00000586477 THRAP3Q9Y2W1 955 aaKnown RBP22.2■■□□□ 1.14
ATG4D-205ENST00000586477 LRRC37A3O60309 1634 aa22.19■■□□□ 1.14
ATG4D-205ENST00000586477 POLR3GLQ9BT43 218 aa22.18■■□□□ 1.14
ATG4D-205ENST00000586477 SRCAPQ6ZRS2 3230 aa22.17■■□□□ 1.14
ATG4D-205ENST00000586477 WASHC2AQ641Q2 1341 aa22.17■■□□□ 1.14
ATG4D-205ENST00000586477 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
ATG4D-205ENST00000586477 TOM1L2Q6ZVM7 507 aa22.16■■□□□ 1.14
ATG4D-205ENST00000586477 DISP2A7MBM2 1401 aa22.14■■□□□ 1.14
ATG4D-205ENST00000586477 C11orf95C9JLR9 678 aaPredicted RBP22.14■■□□□ 1.13
ATG4D-205ENST00000586477 KIF20BQ96Q89 1820 aa22.13■■□□□ 1.13
ATG4D-205ENST00000586477 FBLN1P23142 703 aa22.13■■□□□ 1.13
ATG4D-205ENST00000586477 CARD10Q9BWT7 1032 aa22.13■■□□□ 1.13
ATG4D-205ENST00000586477 CARD14Q9BXL6 1004 aa22.13■■□□□ 1.13
ATG4D-205ENST00000586477 FYB1O15117 783 aa22.12■■□□□ 1.13
ATG4D-205ENST00000586477 BAG6P46379 1132 aa22.12■■□□□ 1.13
ATG4D-205ENST00000586477 FAM196AQ6ZSG2 479 aa22.12■■□□□ 1.13
ATG4D-205ENST00000586477 ERBB3P21860 1342 aa22.11■■□□□ 1.13
ATG4D-205ENST00000586477 SBF2Q86WG5 1849 aa22.11■■□□□ 1.13
ATG4D-205ENST00000586477 PDE3BQ13370 1112 aa22.11■■□□□ 1.13
ATG4D-205ENST00000586477 TRIM37O94972 964 aa22.09■■□□□ 1.13
ATG4D-205ENST00000586477 COG3Q96JB2 828 aa22.09■■□□□ 1.13
ATG4D-205ENST00000586477 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
ATG4D-205ENST00000586477 CSB-PGBD3P0DP91 1061 aa22.08■■□□□ 1.13
ATG4D-205ENST00000586477 EN1Q05925 392 aaPredicted RBP22.08■■□□□ 1.13
ATG4D-205ENST00000586477 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
ATG4D-205ENST00000586477 ANKRD24Q8TF21 1146 aa22.07■■□□□ 1.12
ATG4D-205ENST00000586477 IP6K1Q92551 441 aa22.07■■□□□ 1.12
ATG4D-205ENST00000586477 RGPD2P0DJD1 1756 aa22.07■■□□□ 1.12
ATG4D-205ENST00000586477 NSD3Q9BZ95 1437 aa22.06■■□□□ 1.12
ATG4D-205ENST00000586477 DDB1Q16531 1140 aa22.05■■□□□ 1.12
ATG4D-205ENST00000586477 MARCH10Q8NA82 808 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-205ENST00000586477 OVOS2A0A0G2JMS6 1433 aa22.04■■□□□ 1.12
ATG4D-205ENST00000586477 FAM208AQ9UK61 1670 aaKnown RBP22.04■■□□□ 1.12
ATG4D-205ENST00000586477 HOXC9P31274 260 aa22.03■■□□□ 1.12
ATG4D-205ENST00000586477 CAMKK2Q96RR4 588 aa22.03■■□□□ 1.12
ATG4D-205ENST00000586477 CDCA7Q9BWT1 371 aaPredicted RBP22.03■■□□□ 1.12
ATG4D-205ENST00000586477 RREB1Q92766 1687 aa22.03■■□□□ 1.12
ATG4D-205ENST00000586477 EZH2Q15910 746 aaKnown RBP22.02■■□□□ 1.12
ATG4D-205ENST00000586477 PTF1AQ7RTS3 328 aa22.02■■□□□ 1.12
ATG4D-205ENST00000586477 NLRP2Q9NX02 1062 aa22.02■■□□□ 1.12
ATG4D-205ENST00000586477 TNS2Q63HR2 1409 aa22.01■■□□□ 1.11
ATG4D-205ENST00000586477 RRS1Q15050 365 aaKnown RBP22.01■■□□□ 1.11
ATG4D-205ENST00000586477 PANK3Q9H999 370 aa22.01■■□□□ 1.11
ATG4D-205ENST00000586477 BCL9O00512 1426 aa22■■□□□ 1.11
ATG4D-205ENST00000586477 APBA3O96018 575 aa21.99■■□□□ 1.11
ATG4D-205ENST00000586477 NUP188Q5SRE5 1749 aa21.99■■□□□ 1.11
ATG4D-205ENST00000586477 RTL1A6NKG5 1358 aa21.99■■□□□ 1.11
ATG4D-205ENST00000586477 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
ATG4D-205ENST00000586477 LTV1Q96GA3 475 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-205ENST00000586477 KNSTRNQ9Y448 316 aa21.98■■□□□ 1.11
ATG4D-205ENST00000586477 PSDA5PKW4 1024 aaPredicted RBP21.97■■□□□ 1.11
ATG4D-205ENST00000586477 AMPHP49418 695 aa21.97■■□□□ 1.11
ATG4D-205ENST00000586477 ANKRD26Q9UPS8 1709 aa21.97■■□□□ 1.11
ATG4D-205ENST00000586477 EXOC5O00471 708 aa21.96■■□□□ 1.11
ATG4D-205ENST00000586477 CGNL1Q0VF96 1302 aa21.96■■□□□ 1.11
ATG4D-205ENST00000586477 LRP5O75197 1615 aa21.95■■□□□ 1.1
ATG4D-205ENST00000586477 RGPD3A6NKT7 1758 aaPredicted RBP21.95■■□□□ 1.1
ATG4D-205ENST00000586477 RGPD4Q7Z3J3 1758 aa21.95■■□□□ 1.1
ATG4D-205ENST00000586477 IL2RBP14784 551 aa21.95■■□□□ 1.1
ATG4D-205ENST00000586477 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
ATG4D-205ENST00000586477 NSD2O96028 1365 aa21.94■■□□□ 1.1
ATG4D-205ENST00000586477 PARD3Q8TEW0 1356 aa21.94■■□□□ 1.1
ATG4D-205ENST00000586477 MAP2P11137 1827 aaKnown RBP21.94■■□□□ 1.1
ATG4D-205ENST00000586477 NHSQ6T4R5 1651 aa21.92■■□□□ 1.1
ATG4D-205ENST00000586477 HSP90AB2PQ58FF8 381 aa21.92■■□□□ 1.1
ATG4D-205ENST00000586477 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
ATG4D-205ENST00000586477 MEGF6O75095 1541 aa21.91■■□□□ 1.1
ATG4D-205ENST00000586477 INSRP06213 1382 aa21.91■■□□□ 1.1
ATG4D-205ENST00000586477 NPC1L1Q9UHC9 1359 aa21.91■■□□□ 1.1
ATG4D-205ENST00000586477 NBPF6Q5VWK0 638 aa21.91■■□□□ 1.1
ATG4D-205ENST00000586477 NBPF4Q96M43 638 aa21.91■■□□□ 1.1
ATG4D-205ENST00000586477 BCL11BQ9C0K0 894 aaPredicted RBP21.91■■□□□ 1.1
ATG4D-205ENST00000586477 FLT4P35916 1363 aa21.9■■□□□ 1.1
ATG4D-205ENST00000586477 R3HDM1Q15032 1099 aaKnown RBP21.9■■□□□ 1.1
ATG4D-205ENST00000586477 KIF24Q5T7B8 1368 aa21.89■■□□□ 1.1
ATG4D-205ENST00000586477 PER1O15534 1290 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms