RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 DDB1Q16531 1140 aa21.68■■□□□ 1.06
SF3A2-202ENST00000586396 NLRP6P59044 892 aa21.67■■□□□ 1.06
SF3A2-202ENST00000586396 TOM1L2Q6ZVM7 507 aa21.67■■□□□ 1.06
SF3A2-202ENST00000586396 ANO8Q9HCE9 1232 aaPredicted RBP21.67■■□□□ 1.06
SF3A2-202ENST00000586396 PLSCR1O15162 318 aa21.66■■□□□ 1.06
SF3A2-202ENST00000586396 NBPF1Q3BBV0 1214 aa21.66■■□□□ 1.06
SF3A2-202ENST00000586396 CPSF1Q10570 1443 aaKnown RBP21.65■■□□□ 1.06
SF3A2-202ENST00000586396 TRPM1Q7Z4N2 1603 aa21.64■■□□□ 1.05
SF3A2-202ENST00000586396 WDR17Q8IZU2 1322 aa21.63■■□□□ 1.05
SF3A2-202ENST00000586396 BCL11BQ9C0K0 894 aaPredicted RBP21.63■■□□□ 1.05
SF3A2-202ENST00000586396 GOLGB1Q14789 3259 aaKnown RBP21.63■■□□□ 1.05
SF3A2-202ENST00000586396 CABP1Q9NZU7 370 aa21.62■■□□□ 1.05
SF3A2-202ENST00000586396 BCL9O00512 1426 aa21.61■■□□□ 1.05
SF3A2-202ENST00000586396 PTF1AQ7RTS3 328 aa21.6■■□□□ 1.05
SF3A2-202ENST00000586396 CDCA7Q9BWT1 371 aaPredicted RBP21.59■■□□□ 1.05
SF3A2-202ENST00000586396 NHSQ6T4R5 1651 aa21.59■■□□□ 1.05
SF3A2-202ENST00000586396 ZBTB7AO95365 584 aa21.58■■□□□ 1.05
SF3A2-202ENST00000586396 MARCH10Q8NA82 808 aaPredicted RBP21.58■■□□□ 1.05
SF3A2-202ENST00000586396 PDGFDQ9GZP0 370 aaPredicted RBP21.58■■□□□ 1.05
SF3A2-202ENST00000586396 AXIN2Q9Y2T1 843 aa21.58■■□□□ 1.05
SF3A2-202ENST00000586396 TNS2Q63HR2 1409 aa21.56■■□□□ 1.04
SF3A2-202ENST00000586396 NFAT5O94916 1531 aa21.56■■□□□ 1.04
SF3A2-202ENST00000586396 ABCC6O95255 1503 aa21.56■■□□□ 1.04
SF3A2-202ENST00000586396 CSB-PGBD3P0DP91 1061 aa21.56■■□□□ 1.04
SF3A2-202ENST00000586396 SOX12O15370 315 aa21.55■■□□□ 1.04
SF3A2-202ENST00000586396 STK32BQ9NY57 414 aa21.55■■□□□ 1.04
SF3A2-202ENST00000586396 CHD4Q14839 1912 aa21.55■■□□□ 1.04
SF3A2-202ENST00000586396 EVC2Q86UK5 1308 aa21.55■■□□□ 1.04
SF3A2-202ENST00000586396 PROM2Q8N271 834 aa21.54■■□□□ 1.04
SF3A2-202ENST00000586396 KCNH5Q8NCM2 988 aa21.54■■□□□ 1.04
SF3A2-202ENST00000586396 MON2Q7Z3U7 1717 aa21.54■■□□□ 1.04
SF3A2-202ENST00000586396 PTGER2P43116 358 aa21.53■■□□□ 1.04
SF3A2-202ENST00000586396 TXNRD1Q16881 649 aa21.53■■□□□ 1.04
SF3A2-202ENST00000586396 ARHGEF25Q86VW2 580 aa21.53■■□□□ 1.04
SF3A2-202ENST00000586396 CARD10Q9BWT7 1032 aa21.53■■□□□ 1.04
SF3A2-202ENST00000586396 CCDC7Q96M83 1385 aa21.52■■□□□ 1.04
SF3A2-202ENST00000586396 LTN1O94822 1766 aa21.52■■□□□ 1.04
SF3A2-202ENST00000586396 L3MBTL2Q969R5 705 aa21.52■■□□□ 1.04
SF3A2-202ENST00000586396 ATF5Q9Y2D1 282 aaPredicted RBP21.52■■□□□ 1.04
SF3A2-202ENST00000586396 TTC21BQ7Z4L5 1316 aa21.52■■□□□ 1.03
SF3A2-202ENST00000586396 PAPPAQ13219 1627 aa21.51■■□□□ 1.03
SF3A2-202ENST00000586396 BTAF1O14981 1849 aa21.5■■□□□ 1.03
SF3A2-202ENST00000586396 SLC15A2Q16348 729 aa21.5■■□□□ 1.03
SF3A2-202ENST00000586396 TTC21AQ8NDW8 1320 aa21.5■■□□□ 1.03
SF3A2-202ENST00000586396 USP54Q70EL1 1684 aa21.5■■□□□ 1.03
SF3A2-202ENST00000586396 EXOC5O00471 708 aa21.49■■□□□ 1.03
SF3A2-202ENST00000586396 ZNF692Q9BU19 519 aaPredicted RBP21.48■■□□□ 1.03
SF3A2-202ENST00000586396 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
SF3A2-202ENST00000586396 MTFR1LQ9H019 292 aa21.48■■□□□ 1.03
SF3A2-202ENST00000586396 ZNF784Q8NCA9 323 aaPredicted RBP21.47■■□□□ 1.03
SF3A2-202ENST00000586396 KTN1Q86UP2 1357 aaKnown RBP21.47■■□□□ 1.03
SF3A2-202ENST00000586396 TRIM26Q12899 539 aaPredicted RBP21.46■■□□□ 1.03
SF3A2-202ENST00000586396 SIN3AQ96ST3 1273 aa21.45■■□□□ 1.02
SF3A2-202ENST00000586396 SYT17Q9BSW7 474 aa21.45■■□□□ 1.02
SF3A2-202ENST00000586396 ROCK2O75116 1388 aaKnown RBP21.45■■□□□ 1.02
SF3A2-202ENST00000586396 KAT6BQ8WYB5 2073 aa21.44■■□□□ 1.02
SF3A2-202ENST00000586396 ACSBG1Q96GR2 724 aa21.43■■□□□ 1.02
SF3A2-202ENST00000586396 ERBB3P21860 1342 aa21.42■■□□□ 1.02
SF3A2-202ENST00000586396 QSER1Q2KHR3 1735 aa21.42■■□□□ 1.02
SF3A2-202ENST00000586396 SBNO2Q9Y2G9 1366 aa21.42■■□□□ 1.02
SF3A2-202ENST00000586396 SGIP1Q9BQI5 828 aa21.41■■□□□ 1.02
SF3A2-202ENST00000586396 FAM208AQ9UK61 1670 aaKnown RBP21.4■■□□□ 1.02
SF3A2-202ENST00000586396 ARXQ96QS3 562 aa21.39■■□□□ 1.01
SF3A2-202ENST00000586396 NLRP2Q9NX02 1062 aa21.39■■□□□ 1.01
SF3A2-202ENST00000586396 CEP350Q5VT06 3117 aa21.38■■□□□ 1.01
SF3A2-202ENST00000586396 MAP3K5Q99683 1374 aa21.38■■□□□ 1.01
SF3A2-202ENST00000586396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.38■■□□□ 1.01
SF3A2-202ENST00000586396 TUBGCP6Q96RT7 1819 aa21.38■■□□□ 1.01
SF3A2-202ENST00000586396 IL2RBP14784 551 aa21.37■■□□□ 1.01
SF3A2-202ENST00000586396 USP31Q70CQ4 1352 aa21.36■■□□□ 1.01
SF3A2-202ENST00000586396 ZNF827Q17R98 1081 aa21.35■■□□□ 1.01
SF3A2-202ENST00000586396 DOT1LQ8TEK3 1739 aa21.35■■□□□ 1.01
SF3A2-202ENST00000586396 CD163L1Q9NR16 1453 aa21.34■■□□□ 1.01
SF3A2-202ENST00000586396 SENP3-EIF4A1A0A087X0R7 540 aa21.34■■□□□ 1.01
SF3A2-202ENST00000586396 COL24A1Q17RW2 1714 aa21.34■■□□□ 1.01
SF3A2-202ENST00000586396 NME9Q86XW9 330 aa21.33■■□□□ 1.01
SF3A2-202ENST00000586396 ANKRD24Q8TF21 1146 aa21.33■■□□□ 1.01
SF3A2-202ENST00000586396 NEUROD1Q13562 356 aa21.31■■□□□ 1
SF3A2-202ENST00000586396 EDC4Q6P2E9 1401 aaKnown RBP21.3■■□□□ 1
SF3A2-202ENST00000586396 C1QTNF8P60827 252 aa21.3■■□□□ 1
SF3A2-202ENST00000586396 GPR162Q16538 588 aa21.3■■□□□ 1
SF3A2-202ENST00000586396 KLHL34Q8N239 644 aa21.3■■□□□ 1
SF3A2-202ENST00000586396 LRRC4BQ9NT99 713 aa21.3■■□□□ 1
SF3A2-202ENST00000586396 TONSLQ96HA7 1378 aa21.3■■□□□ 1
SF3A2-202ENST00000586396 LY75O60449 1722 aa21.29■■□□□ 1
SF3A2-202ENST00000586396 HDGFL2Q7Z4V5 671 aaPredicted RBP21.28■■□□□ 1
SF3A2-202ENST00000586396 TMC1Q8TDI8 760 aa21.28■■□□□ 1
SF3A2-202ENST00000586396 SHANK3Q9BYB0 1731 aa21.28■■□□□ 1
SF3A2-202ENST00000586396 POLD1P28340 1107 aa21.27■■□□□ 1
SF3A2-202ENST00000586396 SLC27A3Q5K4L6 730 aa21.27■■□□□ 1
SF3A2-202ENST00000586396 PELP1Q8IZL8 1130 aaKnown RBP21.26■□□□□ 0.99
SF3A2-202ENST00000586396 SLC16A10Q8TF71 515 aa21.26■□□□□ 0.99
SF3A2-202ENST00000586396 AKT1S1Q96B36 256 aa21.26■□□□□ 0.99
SF3A2-202ENST00000586396 A0A1W2PP64 1363 aa21.25■□□□□ 0.99
SF3A2-202ENST00000586396 RGPD2P0DJD1 1756 aa21.25■□□□□ 0.99
SF3A2-202ENST00000586396 PNPLA7Q6ZV29 1317 aa21.25■□□□□ 0.99
SF3A2-202ENST00000586396 CLSPNQ9HAW4 1339 aa21.25■□□□□ 0.99
SF3A2-202ENST00000586396 DDX54Q8TDD1 881 aaKnown RBP21.24■□□□□ 0.99
SF3A2-202ENST00000586396 GIGYF1O75420 1035 aaPredicted RBP21.23■□□□□ 0.99
SF3A2-202ENST00000586396 SYTL4Q96C24 671 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms