RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 SBF2Q86WG5 1849 aa37.95■■■■□ 3.67
PTBP1-206ENST00000585856 RGPD5Q99666 1765 aa37.95■■■■□ 3.67
PTBP1-206ENST00000585856 TOM1L2Q6ZVM7 507 aa37.94■■■■□ 3.66
PTBP1-206ENST00000585856 MON2Q7Z3U7 1717 aa37.94■■■■□ 3.66
PTBP1-206ENST00000585856 SBNO2Q9Y2G9 1366 aa37.93■■■■□ 3.66
PTBP1-206ENST00000585856 RGPD3A6NKT7 1758 aaPredicted RBP37.93■■■■□ 3.66
PTBP1-206ENST00000585856 RGPD4Q7Z3J3 1758 aa37.93■■■■□ 3.66
PTBP1-206ENST00000585856 WDR17Q8IZU2 1322 aa37.92■■■■□ 3.66
PTBP1-206ENST00000585856 ARHGEF25Q86VW2 580 aa37.9■■■■□ 3.66
PTBP1-206ENST00000585856 DDB1Q16531 1140 aa37.89■■■■□ 3.66
PTBP1-206ENST00000585856 NBPF14Q5TI25 921 aa37.89■■■■□ 3.66
PTBP1-206ENST00000585856 KTN1Q86UP2 1357 aaKnown RBP37.89■■■■□ 3.66
PTBP1-206ENST00000585856 CDCA7Q9BWT1 371 aaPredicted RBP37.88■■■■□ 3.65
PTBP1-206ENST00000585856 AXIN2Q9Y2T1 843 aa37.88■■■■□ 3.65
PTBP1-206ENST00000585856 ABCC6O95255 1503 aa37.87■■■■□ 3.65
PTBP1-206ENST00000585856 NFAT5O94916 1531 aa37.86■■■■□ 3.65
PTBP1-206ENST00000585856 USP54Q70EL1 1684 aa37.84■■■■□ 3.65
PTBP1-206ENST00000585856 CARD10Q9BWT7 1032 aa37.8■■■■□ 3.64
PTBP1-206ENST00000585856 SOX12O15370 315 aa37.79■■■■□ 3.64
PTBP1-206ENST00000585856 CARD11Q9BXL7 1154 aa37.79■■■■□ 3.64
PTBP1-206ENST00000585856 BCL9O00512 1426 aa37.78■■■■□ 3.64
PTBP1-206ENST00000585856 PLSCR1O15162 318 aa37.78■■■■□ 3.64
PTBP1-206ENST00000585856 CSB-PGBD3P0DP91 1061 aa37.78■■■■□ 3.64
PTBP1-206ENST00000585856 USP31Q70CQ4 1352 aa37.76■■■■□ 3.64
PTBP1-206ENST00000585856 BCL11BQ9C0K0 894 aaPredicted RBP37.75■■■■□ 3.63
PTBP1-206ENST00000585856 CCDC7Q96M83 1385 aa37.75■■■■□ 3.63
PTBP1-206ENST00000585856 LTN1O94822 1766 aa37.74■■■■□ 3.63
PTBP1-206ENST00000585856 CD163L1Q9NR16 1453 aa37.73■■■■□ 3.63
PTBP1-206ENST00000585856 TONSLQ96HA7 1378 aa37.71■■■■□ 3.63
PTBP1-206ENST00000585856 MARCH10Q8NA82 808 aaPredicted RBP37.71■■■■□ 3.63
PTBP1-206ENST00000585856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.7■■■■□ 3.63
PTBP1-206ENST00000585856 HDGFL2Q7Z4V5 671 aaPredicted RBP37.68■■■■□ 3.62
PTBP1-206ENST00000585856 EXOC5O00471 708 aa37.67■■■■□ 3.62
PTBP1-206ENST00000585856 TMC1Q8TDI8 760 aa37.66■■■■□ 3.62
PTBP1-206ENST00000585856 EDC4Q6P2E9 1401 aaKnown RBP37.66■■■■□ 3.62
PTBP1-206ENST00000585856 TNS2Q63HR2 1409 aa37.65■■■■□ 3.62
PTBP1-206ENST00000585856 PUS7Q96PZ0 661 aaKnown RBP37.65■■■■□ 3.62
PTBP1-206ENST00000585856 SPON1Q9HCB6 807 aa37.65■■■■□ 3.62
PTBP1-206ENST00000585856 NME9Q86XW9 330 aa37.63■■■■□ 3.61
PTBP1-206ENST00000585856 TERF2IPQ9NYB0 399 aa37.63■■■■□ 3.61
PTBP1-206ENST00000585856 ERBB3P21860 1342 aa37.62■■■■□ 3.61
PTBP1-206ENST00000585856 PTF1AQ7RTS3 328 aa37.61■■■■□ 3.61
PTBP1-206ENST00000585856 SLC12A5Q9H2X9 1139 aa37.61■■■■□ 3.61
PTBP1-206ENST00000585856 KCNQ2O43526 872 aa37.6■■■■□ 3.61
PTBP1-206ENST00000585856 CASZ1Q86V15 1759 aa37.6■■■■□ 3.61
PTBP1-206ENST00000585856 A0A1W2PP64 1363 aa37.57■■■■□ 3.61
PTBP1-206ENST00000585856 NHSQ6T4R5 1651 aa37.57■■■■□ 3.61
PTBP1-206ENST00000585856 PPP1R1BQ9UD71 204 aaPredicted RBP37.56■■■■□ 3.6
PTBP1-206ENST00000585856 NINLQ9Y2I6 1382 aa37.55■■■■□ 3.6
PTBP1-206ENST00000585856 ANO8Q9HCE9 1232 aaPredicted RBP37.55■■■■□ 3.6
PTBP1-206ENST00000585856 PROM2Q8N271 834 aa37.54■■■■□ 3.6
PTBP1-206ENST00000585856 NLRP2Q9NX02 1062 aa37.54■■■■□ 3.6
PTBP1-206ENST00000585856 FAM208AQ9UK61 1670 aaKnown RBP37.53■■■■□ 3.6
PTBP1-206ENST00000585856 SLC24A1O60721 1099 aa37.52■■■■□ 3.6
PTBP1-206ENST00000585856 IL2RBP14784 551 aa37.51■■■■□ 3.6
PTBP1-206ENST00000585856 TXNRD1Q16881 649 aa37.49■■■■□ 3.59
PTBP1-206ENST00000585856 ANKRD24Q8TF21 1146 aa37.49■■■■□ 3.59
PTBP1-206ENST00000585856 TESK2Q96S53 571 aa37.46■■■■□ 3.59
PTBP1-206ENST00000585856 KAT6BQ8WYB5 2073 aa37.45■■■■□ 3.58
PTBP1-206ENST00000585856 STK32BQ9NY57 414 aa37.44■■■■□ 3.58
PTBP1-206ENST00000585856 BTAF1O14981 1849 aa37.43■■■■□ 3.58
PTBP1-206ENST00000585856 ST20-MTHFSA0A0A6YYL1 179 aa37.43■■■■□ 3.58
PTBP1-206ENST00000585856 IP6K1Q92551 441 aa37.42■■■■□ 3.58
PTBP1-206ENST00000585856 DCAF8L1A6NGE4 600 aa37.4■■■■□ 3.58
PTBP1-206ENST00000585856 SLC15A2Q16348 729 aa37.39■■■■□ 3.58
PTBP1-206ENST00000585856 ACSBG1Q96GR2 724 aa37.39■■■■□ 3.58
PTBP1-206ENST00000585856 COG3Q96JB2 828 aa37.37■■■■□ 3.57
PTBP1-206ENST00000585856 PDGFDQ9GZP0 370 aaPredicted RBP37.36■■■■□ 3.57
PTBP1-206ENST00000585856 PAPPAQ13219 1627 aa37.35■■■■□ 3.57
PTBP1-206ENST00000585856 MYOM1P52179 1685 aa37.34■■■■□ 3.57
PTBP1-206ENST00000585856 ZBTB7AO95365 584 aa37.34■■■■□ 3.57
PTBP1-206ENST00000585856 ANKRD36BQ8N2N9 1353 aa37.33■■■■□ 3.57
PTBP1-206ENST00000585856 MAP3K19Q56UN5 1328 aa37.3■■■■□ 3.56
PTBP1-206ENST00000585856 PTGER2P43116 358 aa37.29■■■■□ 3.56
PTBP1-206ENST00000585856 RGPD2P0DJD1 1756 aa37.29■■■■□ 3.56
PTBP1-206ENST00000585856 YY1P25490 414 aa37.28■■■■□ 3.56
PTBP1-206ENST00000585856 LTV1Q96GA3 475 aaPredicted RBP37.28■■■■□ 3.56
PTBP1-206ENST00000585856 HOXC9P31274 260 aa37.27■■■■□ 3.56
PTBP1-206ENST00000585856 AMPHP49418 695 aa37.27■■■■□ 3.56
PTBP1-206ENST00000585856 MTFR1LQ9H019 292 aa37.27■■■■□ 3.56
PTBP1-206ENST00000585856 TMF1P82094 1093 aa37.26■■■■□ 3.56
PTBP1-206ENST00000585856 ATF5Q9Y2D1 282 aaPredicted RBP37.26■■■■□ 3.56
PTBP1-206ENST00000585856 RTL1A6NKG5 1358 aa37.25■■■■□ 3.55
PTBP1-206ENST00000585856 DDX54Q8TDD1 881 aaKnown RBP37.23■■■■□ 3.55
PTBP1-206ENST00000585856 USP47Q96K76 1375 aa37.23■■■■□ 3.55
PTBP1-206ENST00000585856 QSER1Q2KHR3 1735 aa37.22■■■■□ 3.55
PTBP1-206ENST00000585856 SHANK3Q9BYB0 1731 aa37.22■■■■□ 3.55
PTBP1-206ENST00000585856 DOT1LQ8TEK3 1739 aa37.22■■■■□ 3.55
PTBP1-206ENST00000585856 TRIM26Q12899 539 aaPredicted RBP37.21■■■■□ 3.55
PTBP1-206ENST00000585856 KIF20BQ96Q89 1820 aa37.2■■■■□ 3.55
PTBP1-206ENST00000585856 SLC27A3Q5K4L6 730 aa37.18■■■■□ 3.54
PTBP1-206ENST00000585856 CDCA8Q53HL2 280 aa37.17■■■■□ 3.54
PTBP1-206ENST00000585856 FYB1O15117 783 aa37.16■■■■□ 3.54
PTBP1-206ENST00000585856 FBLN1P23142 703 aa37.16■■■■□ 3.54
PTBP1-206ENST00000585856 SGIP1Q9BQI5 828 aa37.16■■■■□ 3.54
PTBP1-206ENST00000585856 LRRC4BQ9NT99 713 aa37.16■■■■□ 3.54
PTBP1-206ENST00000585856 LY75O60449 1722 aa37.15■■■■□ 3.54
PTBP1-206ENST00000585856 MEGF6O75095 1541 aa37.14■■■■□ 3.54
PTBP1-206ENST00000585856 SMG6Q86US8 1419 aaKnown RBP37.13■■■■□ 3.53
PTBP1-206ENST00000585856 ZNF827Q17R98 1081 aa37.13■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms