RNA–Protein interactions for RNA: ENST00000585844.1

CCDC130-203, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-203ENST00000585844 WNK3Q9BYP7 1800 aa23.16■■□□□ 1.3
CCDC130-203ENST00000585844 COL18A1P39060 1754 aa23.16■■□□□ 1.3
CCDC130-203ENST00000585844 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
CCDC130-203ENST00000585844 WDR17Q8IZU2 1322 aa23.14■■□□□ 1.3
CCDC130-203ENST00000585844 CDCA7Q9BWT1 371 aaPredicted RBP23.14■■□□□ 1.29
CCDC130-203ENST00000585844 BCL9O00512 1426 aa23.14■■□□□ 1.29
CCDC130-203ENST00000585844 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
CCDC130-203ENST00000585844 PTF1AQ7RTS3 328 aa23.13■■□□□ 1.29
CCDC130-203ENST00000585844 AKAP12Q02952 1782 aa23.13■■□□□ 1.29
CCDC130-203ENST00000585844 MARCH10Q8NA82 808 aaPredicted RBP23.12■■□□□ 1.29
CCDC130-203ENST00000585844 AXIN2Q9Y2T1 843 aa23.12■■□□□ 1.29
CCDC130-203ENST00000585844 PROM2Q8N271 834 aa23.11■■□□□ 1.29
CCDC130-203ENST00000585844 CPSF1Q10570 1443 aaKnown RBP23.1■■□□□ 1.29
CCDC130-203ENST00000585844 PDGFDQ9GZP0 370 aaPredicted RBP23.09■■□□□ 1.29
CCDC130-203ENST00000585844 ZBTB7AO95365 584 aa23.08■■□□□ 1.29
CCDC130-203ENST00000585844 KCNH5Q8NCM2 988 aa23.08■■□□□ 1.29
CCDC130-203ENST00000585844 MYOM1P52179 1685 aa23.07■■□□□ 1.28
CCDC130-203ENST00000585844 ARHGEF25Q86VW2 580 aa23.07■■□□□ 1.28
CCDC130-203ENST00000585844 CARD10Q9BWT7 1032 aa23.07■■□□□ 1.28
CCDC130-203ENST00000585844 PTGER2P43116 358 aa23.06■■□□□ 1.28
CCDC130-203ENST00000585844 STK32BQ9NY57 414 aa23.06■■□□□ 1.28
CCDC130-203ENST00000585844 RGPD5Q99666 1765 aa23.06■■□□□ 1.28
CCDC130-203ENST00000585844 EVC2Q86UK5 1308 aa23.06■■□□□ 1.28
CCDC130-203ENST00000585844 TXNRD1Q16881 649 aa23.05■■□□□ 1.28
CCDC130-203ENST00000585844 ZNF692Q9BU19 519 aaPredicted RBP23.05■■□□□ 1.28
CCDC130-203ENST00000585844 EXOC5O00471 708 aa23.04■■□□□ 1.28
CCDC130-203ENST00000585844 CSB-PGBD3P0DP91 1061 aa23.04■■□□□ 1.28
CCDC130-203ENST00000585844 SLC15A2Q16348 729 aa23.04■■□□□ 1.28
CCDC130-203ENST00000585844 TTC21BQ7Z4L5 1316 aa23.04■■□□□ 1.28
CCDC130-203ENST00000585844 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
CCDC130-203ENST00000585844 ATF5Q9Y2D1 282 aaPredicted RBP23.03■■□□□ 1.28
CCDC130-203ENST00000585844 TTC21AQ8NDW8 1320 aa23.02■■□□□ 1.28
CCDC130-203ENST00000585844 CCDC7Q96M83 1385 aa23.01■■□□□ 1.27
CCDC130-203ENST00000585844 SOX12O15370 315 aa23■■□□□ 1.27
CCDC130-203ENST00000585844 ABCC6O95255 1503 aa22.99■■□□□ 1.27
CCDC130-203ENST00000585844 SYT17Q9BSW7 474 aa22.99■■□□□ 1.27
CCDC130-203ENST00000585844 FHDC1Q9C0D6 1143 aaPredicted RBP22.99■■□□□ 1.27
CCDC130-203ENST00000585844 MTFR1LQ9H019 292 aa22.99■■□□□ 1.27
CCDC130-203ENST00000585844 TNS2Q63HR2 1409 aa22.99■■□□□ 1.27
CCDC130-203ENST00000585844 NFAT5O94916 1531 aa22.98■■□□□ 1.27
CCDC130-203ENST00000585844 NHSQ6T4R5 1651 aa22.97■■□□□ 1.27
CCDC130-203ENST00000585844 ZNF784Q8NCA9 323 aaPredicted RBP22.97■■□□□ 1.27
CCDC130-203ENST00000585844 SGIP1Q9BQI5 828 aa22.96■■□□□ 1.27
CCDC130-203ENST00000585844 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
CCDC130-203ENST00000585844 L3MBTL2Q969R5 705 aa22.94■■□□□ 1.26
CCDC130-203ENST00000585844 PAPPAQ13219 1627 aa22.92■■□□□ 1.26
CCDC130-203ENST00000585844 ACSBG1Q96GR2 724 aa22.91■■□□□ 1.26
CCDC130-203ENST00000585844 MON2Q7Z3U7 1717 aa22.91■■□□□ 1.26
CCDC130-203ENST00000585844 UTRNP46939 3433 aa22.91■■□□□ 1.26
CCDC130-203ENST00000585844 CHD4Q14839 1912 aa22.9■■□□□ 1.26
CCDC130-203ENST00000585844 ERBB3P21860 1342 aa22.9■■□□□ 1.26
CCDC130-203ENST00000585844 ARXQ96QS3 562 aa22.9■■□□□ 1.26
CCDC130-203ENST00000585844 ROCK2O75116 1388 aaKnown RBP22.89■■□□□ 1.26
CCDC130-203ENST00000585844 USP31Q70CQ4 1352 aa22.89■■□□□ 1.26
CCDC130-203ENST00000585844 MAP3K5Q99683 1374 aa22.89■■□□□ 1.25
CCDC130-203ENST00000585844 USP54Q70EL1 1684 aa22.88■■□□□ 1.25
CCDC130-203ENST00000585844 IL2RBP14784 551 aa22.88■■□□□ 1.25
CCDC130-203ENST00000585844 NLRP2Q9NX02 1062 aa22.88■■□□□ 1.25
CCDC130-203ENST00000585844 BTAF1O14981 1849 aa22.87■■□□□ 1.25
CCDC130-203ENST00000585844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.86■■□□□ 1.25
CCDC130-203ENST00000585844 LTN1O94822 1766 aa22.86■■□□□ 1.25
CCDC130-203ENST00000585844 ZNF827Q17R98 1081 aa22.83■■□□□ 1.25
CCDC130-203ENST00000585844 NME9Q86XW9 330 aa22.82■■□□□ 1.24
CCDC130-203ENST00000585844 ANKRD24Q8TF21 1146 aa22.82■■□□□ 1.24
CCDC130-203ENST00000585844 LRRC4BQ9NT99 713 aa22.82■■□□□ 1.24
CCDC130-203ENST00000585844 CD163L1Q9NR16 1453 aa22.81■■□□□ 1.24
CCDC130-203ENST00000585844 SBNO2Q9Y2G9 1366 aa22.81■■□□□ 1.24
CCDC130-203ENST00000585844 C1QTNF8P60827 252 aa22.81■■□□□ 1.24
CCDC130-203ENST00000585844 SENP3-EIF4A1A0A087X0R7 540 aa22.8■■□□□ 1.24
CCDC130-203ENST00000585844 SLC16A10Q8TF71 515 aa22.8■■□□□ 1.24
CCDC130-203ENST00000585844 QSER1Q2KHR3 1735 aa22.79■■□□□ 1.24
CCDC130-203ENST00000585844 GPR162Q16538 588 aa22.79■■□□□ 1.24
CCDC130-203ENST00000585844 SLC27A3Q5K4L6 730 aa22.79■■□□□ 1.24
CCDC130-203ENST00000585844 AKT1S1Q96B36 256 aa22.79■■□□□ 1.24
CCDC130-203ENST00000585844 SIN3AQ96ST3 1273 aa22.79■■□□□ 1.24
CCDC130-203ENST00000585844 HDGFL2Q7Z4V5 671 aaPredicted RBP22.77■■□□□ 1.24
CCDC130-203ENST00000585844 COL24A1Q17RW2 1714 aa22.77■■□□□ 1.23
CCDC130-203ENST00000585844 POLD1P28340 1107 aa22.76■■□□□ 1.23
CCDC130-203ENST00000585844 KAT6BQ8WYB5 2073 aa22.75■■□□□ 1.23
CCDC130-203ENST00000585844 EDC4Q6P2E9 1401 aaKnown RBP22.75■■□□□ 1.23
CCDC130-203ENST00000585844 TMC1Q8TDI8 760 aa22.75■■□□□ 1.23
CCDC130-203ENST00000585844 FAM208AQ9UK61 1670 aaKnown RBP22.74■■□□□ 1.23
CCDC130-203ENST00000585844 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
CCDC130-203ENST00000585844 DDX54Q8TDD1 881 aaKnown RBP22.74■■□□□ 1.23
CCDC130-203ENST00000585844 PNPLA7Q6ZV29 1317 aa22.74■■□□□ 1.23
CCDC130-203ENST00000585844 KLHL34Q8N239 644 aa22.73■■□□□ 1.23
CCDC130-203ENST00000585844 IP6K1Q92551 441 aa22.72■■□□□ 1.23
CCDC130-203ENST00000585844 SLC12A5Q9H2X9 1139 aa22.72■■□□□ 1.23
CCDC130-203ENST00000585844 TERF2IPQ9NYB0 399 aa22.71■■□□□ 1.23
CCDC130-203ENST00000585844 TFCP2L1Q9NZI6 479 aa22.71■■□□□ 1.23
CCDC130-203ENST00000585844 TUBGCP6Q96RT7 1819 aa22.7■■□□□ 1.22
CCDC130-203ENST00000585844 A0A1W2PP64 1363 aa22.69■■□□□ 1.22
CCDC130-203ENST00000585844 ANKRD36BQ8N2N9 1353 aa22.69■■□□□ 1.22
CCDC130-203ENST00000585844 GIGYF1O75420 1035 aaPredicted RBP22.69■■□□□ 1.22
CCDC130-203ENST00000585844 PELP1Q8IZL8 1130 aaKnown RBP22.69■■□□□ 1.22
CCDC130-203ENST00000585844 SYTL4Q96C24 671 aaPredicted RBP22.69■■□□□ 1.22
CCDC130-203ENST00000585844 CARD11Q9BXL7 1154 aa22.69■■□□□ 1.22
CCDC130-203ENST00000585844 LY75O60449 1722 aa22.68■■□□□ 1.22
CCDC130-203ENST00000585844 LTV1Q96GA3 475 aaPredicted RBP22.68■■□□□ 1.22
CCDC130-203ENST00000585844 DOT1LQ8TEK3 1739 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms