RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 STRN4Q9NRL3 753 aa22.8■■□□□ 1.24
GFAP-205ENST00000585543 COL18A1P39060 1754 aa22.8■■□□□ 1.24
GFAP-205ENST00000585543 MAP2P11137 1827 aaKnown RBP22.8■■□□□ 1.24
GFAP-205ENST00000585543 RGPD5Q99666 1765 aa22.79■■□□□ 1.24
GFAP-205ENST00000585543 TNNT2P45379 298 aaPredicted RBP22.79■■□□□ 1.24
GFAP-205ENST00000585543 CAMTA1Q9Y6Y1 1673 aa22.78■■□□□ 1.24
GFAP-205ENST00000585543 ATRNO75882 1429 aa22.78■■□□□ 1.24
GFAP-205ENST00000585543 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
GFAP-205ENST00000585543 CNGB1Q14028 1251 aaPredicted RBP22.78■■□□□ 1.24
GFAP-205ENST00000585543 MAP3K19Q56UN5 1328 aa22.78■■□□□ 1.24
GFAP-205ENST00000585543 KIF24Q5T7B8 1368 aa22.77■■□□□ 1.24
GFAP-205ENST00000585543 CSB-PGBD3P0DP91 1061 aa22.77■■□□□ 1.24
GFAP-205ENST00000585543 RRS1Q15050 365 aaKnown RBP22.77■■□□□ 1.24
GFAP-205ENST00000585543 RGS17Q9UGC6 210 aaPredicted RBP22.77■■□□□ 1.24
GFAP-205ENST00000585543 COL5A2P05997 1499 aaPredicted RBP22.77■■□□□ 1.24
GFAP-205ENST00000585543 VPS72Q15906 364 aa22.76■■□□□ 1.23
GFAP-205ENST00000585543 SMG6Q86US8 1419 aaKnown RBP22.75■■□□□ 1.23
GFAP-205ENST00000585543 RXRBP28702 533 aa22.75■■□□□ 1.23
GFAP-205ENST00000585543 RBM6P78332 1123 aaKnown RBP22.75■■□□□ 1.23
GFAP-205ENST00000585543 IP6K1Q92551 441 aa22.75■■□□□ 1.23
GFAP-205ENST00000585543 FLT4P35916 1363 aa22.75■■□□□ 1.23
GFAP-205ENST00000585543 FAM208AQ9UK61 1670 aaKnown RBP22.74■■□□□ 1.23
GFAP-205ENST00000585543 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
GFAP-205ENST00000585543 FBLN1P23142 703 aa22.73■■□□□ 1.23
GFAP-205ENST00000585543 HOXC9P31274 260 aa22.73■■□□□ 1.23
GFAP-205ENST00000585543 POTEAQ6S8J7 498 aa22.73■■□□□ 1.23
GFAP-205ENST00000585543 GJD4Q96KN9 370 aaPredicted RBP22.72■■□□□ 1.23
GFAP-205ENST00000585543 TOM1L2Q6ZVM7 507 aa22.71■■□□□ 1.23
GFAP-205ENST00000585543 AXIN2Q9Y2T1 843 aa22.71■■□□□ 1.23
GFAP-205ENST00000585543 EMILIN1Q9Y6C2 1016 aa22.71■■□□□ 1.23
GFAP-205ENST00000585543 WDR17Q8IZU2 1322 aa22.71■■□□□ 1.23
GFAP-205ENST00000585543 CRB1P82279 1406 aa22.71■■□□□ 1.23
GFAP-205ENST00000585543 ANKRD24Q8TF21 1146 aa22.7■■□□□ 1.22
GFAP-205ENST00000585543 PEAK1Q9H792 1746 aa22.69■■□□□ 1.22
GFAP-205ENST00000585543 ERBB3P21860 1342 aa22.69■■□□□ 1.22
GFAP-205ENST00000585543 SPATA31A5Q5VU36 1347 aa22.69■■□□□ 1.22
GFAP-205ENST00000585543 SPATA31A7Q8IWB4 1347 aa22.69■■□□□ 1.22
GFAP-205ENST00000585543 LARP1Q6PKG0 1096 aaKnown RBP22.69■■□□□ 1.22
GFAP-205ENST00000585543 INSRP06213 1382 aa22.68■■□□□ 1.22
GFAP-205ENST00000585543 LTV1Q96GA3 475 aaPredicted RBP22.68■■□□□ 1.22
GFAP-205ENST00000585543 POLKQ9UBT6 870 aa22.68■■□□□ 1.22
GFAP-205ENST00000585543 GLI3P10071 1580 aa22.67■■□□□ 1.22
GFAP-205ENST00000585543 A0A0G2JS52 829 aa22.67■■□□□ 1.22
GFAP-205ENST00000585543 MYT1Q01538 1121 aa22.67■■□□□ 1.22
GFAP-205ENST00000585543 USP35Q9P2H5 1018 aa22.67■■□□□ 1.22
GFAP-205ENST00000585543 CDK12Q9NYV4 1490 aaPredicted RBP22.66■■□□□ 1.22
GFAP-205ENST00000585543 SPATA31A1Q5TZJ5 1347 aa22.66■■□□□ 1.22
GFAP-205ENST00000585543 NLRP2Q9NX02 1062 aa22.66■■□□□ 1.22
GFAP-205ENST00000585543 THRAP3Q9Y2W1 955 aaKnown RBP22.66■■□□□ 1.22
GFAP-205ENST00000585543 TCP11L2Q8N4U5 519 aa22.65■■□□□ 1.22
GFAP-205ENST00000585543 HSP90AB2PQ58FF8 381 aa22.63■■□□□ 1.21
GFAP-205ENST00000585543 CARD10Q9BWT7 1032 aa22.63■■□□□ 1.21
GFAP-205ENST00000585543 RALBP1Q15311 655 aa22.62■■□□□ 1.21
GFAP-205ENST00000585543 WNK3Q9BYP7 1800 aa22.61■■□□□ 1.21
GFAP-205ENST00000585543 MTHFSP49914 203 aa22.61■■□□□ 1.21
GFAP-205ENST00000585543 FAM98CQ17RN3 349 aaKnown RBP22.61■■□□□ 1.21
GFAP-205ENST00000585543 CFAP53Q96M91 514 aa22.61■■□□□ 1.21
GFAP-205ENST00000585543 PARD3Q8TEW0 1356 aa22.61■■□□□ 1.21
GFAP-205ENST00000585543 BARGINQ6ZT62 677 aa22.6■■□□□ 1.21
GFAP-205ENST00000585543 RGS12O14924 1447 aa22.59■■□□□ 1.21
GFAP-205ENST00000585543 RGPD2P0DJD1 1756 aa22.59■■□□□ 1.21
GFAP-205ENST00000585543 CDCA7Q9BWT1 371 aaPredicted RBP22.59■■□□□ 1.21
GFAP-205ENST00000585543 PPP2R1AP30153 589 aa22.57■■□□□ 1.2
GFAP-205ENST00000585543 THSD7AQ9UPZ6 1657 aa22.56■■□□□ 1.2
GFAP-205ENST00000585543 SEPT12Q8IYM1 358 aa22.56■■□□□ 1.2
GFAP-205ENST00000585543 EIF4A2Q14240 407 aaKnown RBP22.55■■□□□ 1.2
GFAP-205ENST00000585543 PARP4Q9UKK3 1724 aaKnown RBP22.54■■□□□ 1.2
GFAP-205ENST00000585543 ONECUT3O60422 494 aaPredicted RBP22.54■■□□□ 1.2
GFAP-205ENST00000585543 DIAPH1O60610 1272 aaKnown RBP22.53■■□□□ 1.2
GFAP-205ENST00000585543 IL2RBP14784 551 aa22.53■■□□□ 1.2
GFAP-205ENST00000585543 MYBBP1AQ9BQG0 1328 aaKnown RBP22.53■■□□□ 1.2
GFAP-205ENST00000585543 ANP32CO43423 234 aa22.52■■□□□ 1.2
GFAP-205ENST00000585543 RAPGEF4Q8WZA2 1011 aa22.52■■□□□ 1.2
GFAP-205ENST00000585543 BRWD3Q6RI45 1802 aa22.52■■□□□ 1.2
GFAP-205ENST00000585543 NBPF6Q5VWK0 638 aa22.51■■□□□ 1.19
GFAP-205ENST00000585543 NBPF4Q96M43 638 aa22.51■■□□□ 1.19
GFAP-205ENST00000585543 PDE3BQ13370 1112 aa22.5■■□□□ 1.19
GFAP-205ENST00000585543 DDB1Q16531 1140 aa22.5■■□□□ 1.19
GFAP-205ENST00000585543 PRKRIP1Q9H875 184 aaPredicted RBP22.5■■□□□ 1.19
GFAP-205ENST00000585543 NUDCQ9Y266 331 aa22.5■■□□□ 1.19
GFAP-205ENST00000585543 LRRC37A3O60309 1634 aa22.49■■□□□ 1.19
GFAP-205ENST00000585543 TATP17735 454 aaPredicted RBP22.49■■□□□ 1.19
GFAP-205ENST00000585543 ILDR2Q71H61 639 aa22.49■■□□□ 1.19
GFAP-205ENST00000585543 KRT27Q7Z3Y8 459 aa22.49■■□□□ 1.19
GFAP-205ENST00000585543 USHBP1Q8N6Y0 703 aa22.49■■□□□ 1.19
GFAP-205ENST00000585543 EYA1Q99502 592 aa22.49■■□□□ 1.19
GFAP-205ENST00000585543 DISP2A7MBM2 1401 aa22.48■■□□□ 1.19
GFAP-205ENST00000585543 EXOC5O00471 708 aa22.48■■□□□ 1.19
GFAP-205ENST00000585543 IL13P35225 146 aa22.47■■□□□ 1.19
GFAP-205ENST00000585543 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
GFAP-205ENST00000585543 COL3A1P02461 1466 aaPredicted RBP22.47■■□□□ 1.19
GFAP-205ENST00000585543 TNS2Q63HR2 1409 aa22.46■■□□□ 1.19
GFAP-205ENST00000585543 RGPD1P0DJD0 1748 aa22.45■■□□□ 1.19
GFAP-205ENST00000585543 U2SURPO15042 1029 aaKnown RBP22.45■■□□□ 1.18
GFAP-205ENST00000585543 NCAPD2Q15021 1401 aa22.45■■□□□ 1.18
GFAP-205ENST00000585543 OVOS2A0A0G2JMS6 1433 aa22.43■■□□□ 1.18
GFAP-205ENST00000585543 MEGF6O75095 1541 aa22.42■■□□□ 1.18
GFAP-205ENST00000585543 PLEKHG2Q9H7P9 1386 aa22.42■■□□□ 1.18
GFAP-205ENST00000585543 SULT6B1Q6IMI4 303 aa22.41■■□□□ 1.18
GFAP-205ENST00000585543 ZCRB1Q8TBF4 217 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms