RNA–Protein interactions for RNA: ENST00000585375.1

GHDC-204, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-204ENST00000585375 TERF2IPQ9NYB0 399 aa22.62■■□□□ 1.21
GHDC-204ENST00000585375 TMC1Q8TDI8 760 aa22.61■■□□□ 1.21
GHDC-204ENST00000585375 WDR17Q8IZU2 1322 aa22.6■■□□□ 1.21
GHDC-204ENST00000585375 CLSPNQ9HAW4 1339 aa22.6■■□□□ 1.21
GHDC-204ENST00000585375 ST20-MTHFSA0A0A6YYL1 179 aa22.6■■□□□ 1.21
GHDC-204ENST00000585375 C11orf95C9JLR9 678 aaPredicted RBP22.6■■□□□ 1.21
GHDC-204ENST00000585375 SLC12A5Q9H2X9 1139 aa22.6■■□□□ 1.21
GHDC-204ENST00000585375 TIMELESSQ9UNS1 1208 aa22.59■■□□□ 1.21
GHDC-204ENST00000585375 TOM1L2Q6ZVM7 507 aa22.58■■□□□ 1.21
GHDC-204ENST00000585375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.58■■□□□ 1.21
GHDC-204ENST00000585375 AXIN2Q9Y2T1 843 aa22.58■■□□□ 1.21
GHDC-204ENST00000585375 A0A1W2PP64 1363 aa22.58■■□□□ 1.21
GHDC-204ENST00000585375 WNK3Q9BYP7 1800 aa22.57■■□□□ 1.2
GHDC-204ENST00000585375 PARD3Q8TEW0 1356 aa22.56■■□□□ 1.2
GHDC-204ENST00000585375 CDCA7Q9BWT1 371 aaPredicted RBP22.56■■□□□ 1.2
GHDC-204ENST00000585375 LRRC37A3O60309 1634 aa22.56■■□□□ 1.2
GHDC-204ENST00000585375 RGPD5Q99666 1765 aa22.55■■□□□ 1.2
GHDC-204ENST00000585375 TRIM37O94972 964 aa22.55■■□□□ 1.2
GHDC-204ENST00000585375 EN1Q05925 392 aaPredicted RBP22.55■■□□□ 1.2
GHDC-204ENST00000585375 NME9Q86XW9 330 aa22.55■■□□□ 1.2
GHDC-204ENST00000585375 USP47Q96K76 1375 aa22.54■■□□□ 1.2
GHDC-204ENST00000585375 SOX12O15370 315 aa22.54■■□□□ 1.2
GHDC-204ENST00000585375 CARD10Q9BWT7 1032 aa22.54■■□□□ 1.2
GHDC-204ENST00000585375 OVOS2A0A0G2JMS6 1433 aa22.53■■□□□ 1.2
GHDC-204ENST00000585375 OVOS2A0A0J9YW53 1432 aa22.53■■□□□ 1.2
GHDC-204ENST00000585375 OVOS2Q6IE36 1432 aa22.53■■□□□ 1.2
GHDC-204ENST00000585375 CCDC7Q96M83 1385 aa22.51■■□□□ 1.19
GHDC-204ENST00000585375 PEAK1Q9H792 1746 aa22.51■■□□□ 1.19
GHDC-204ENST00000585375 CSB-PGBD3P0DP91 1061 aa22.51■■□□□ 1.19
GHDC-204ENST00000585375 DDB1Q16531 1140 aa22.51■■□□□ 1.19
GHDC-204ENST00000585375 LTN1O94822 1766 aa22.5■■□□□ 1.19
GHDC-204ENST00000585375 TMF1P82094 1093 aa22.5■■□□□ 1.19
GHDC-204ENST00000585375 CAMKK2Q96RR4 588 aa22.5■■□□□ 1.19
GHDC-204ENST00000585375 ANKRD36BQ8N2N9 1353 aa22.5■■□□□ 1.19
GHDC-204ENST00000585375 SRCAPQ6ZRS2 3230 aa22.5■■□□□ 1.19
GHDC-204ENST00000585375 APBA3O96018 575 aa22.49■■□□□ 1.19
GHDC-204ENST00000585375 ERBB3P21860 1342 aa22.48■■□□□ 1.19
GHDC-204ENST00000585375 BCL9O00512 1426 aa22.48■■□□□ 1.19
GHDC-204ENST00000585375 LRP5O75197 1615 aa22.47■■□□□ 1.19
GHDC-204ENST00000585375 RREB1Q92766 1687 aa22.47■■□□□ 1.19
GHDC-204ENST00000585375 EZH2Q15910 746 aaKnown RBP22.47■■□□□ 1.19
GHDC-204ENST00000585375 CDCA8Q53HL2 280 aa22.47■■□□□ 1.19
GHDC-204ENST00000585375 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
GHDC-204ENST00000585375 RGPD3A6NKT7 1758 aaPredicted RBP22.44■■□□□ 1.18
GHDC-204ENST00000585375 RGPD4Q7Z3J3 1758 aa22.44■■□□□ 1.18
GHDC-204ENST00000585375 SBF2Q86WG5 1849 aa22.44■■□□□ 1.18
GHDC-204ENST00000585375 COG3Q96JB2 828 aa22.43■■□□□ 1.18
GHDC-204ENST00000585375 TNS2Q63HR2 1409 aa22.42■■□□□ 1.18
GHDC-204ENST00000585375 NUP188Q5SRE5 1749 aa22.41■■□□□ 1.18
GHDC-204ENST00000585375 PSDA5PKW4 1024 aaPredicted RBP22.41■■□□□ 1.18
GHDC-204ENST00000585375 EXOC5O00471 708 aa22.41■■□□□ 1.18
GHDC-204ENST00000585375 FAM208AQ9UK61 1670 aaKnown RBP22.41■■□□□ 1.18
GHDC-204ENST00000585375 MARCH10Q8NA82 808 aaPredicted RBP22.4■■□□□ 1.18
GHDC-204ENST00000585375 ANKRD24Q8TF21 1146 aa22.4■■□□□ 1.18
GHDC-204ENST00000585375 IP6K1Q92551 441 aa22.4■■□□□ 1.18
GHDC-204ENST00000585375 BCL11BQ9C0K0 894 aaPredicted RBP22.39■■□□□ 1.17
GHDC-204ENST00000585375 NLRP2Q9NX02 1062 aa22.39■■□□□ 1.17
GHDC-204ENST00000585375 PLSCR1O15162 318 aa22.38■■□□□ 1.17
GHDC-204ENST00000585375 R3HDM1Q15032 1099 aaKnown RBP22.38■■□□□ 1.17
GHDC-204ENST00000585375 IL2RBP14784 551 aa22.36■■□□□ 1.17
GHDC-204ENST00000585375 NBPF14Q5TI25 921 aa22.36■■□□□ 1.17
GHDC-204ENST00000585375 RTL1A6NKG5 1358 aa22.36■■□□□ 1.17
GHDC-204ENST00000585375 MAP3K19Q56UN5 1328 aa22.35■■□□□ 1.17
GHDC-204ENST00000585375 MYOM1P52179 1685 aa22.35■■□□□ 1.17
GHDC-204ENST00000585375 FYB1O15117 783 aa22.34■■□□□ 1.17
GHDC-204ENST00000585375 KIF20BQ96Q89 1820 aa22.33■■□□□ 1.16
GHDC-204ENST00000585375 HOXC9P31274 260 aa22.32■■□□□ 1.16
GHDC-204ENST00000585375 NHSQ6T4R5 1651 aa22.31■■□□□ 1.16
GHDC-204ENST00000585375 AMPHP49418 695 aa22.31■■□□□ 1.16
GHDC-204ENST00000585375 GGNBP2Q9H3C7 697 aa22.29■■□□□ 1.16
GHDC-204ENST00000585375 KIF24Q5T7B8 1368 aa22.28■■□□□ 1.16
GHDC-204ENST00000585375 PTF1AQ7RTS3 328 aa22.28■■□□□ 1.16
GHDC-204ENST00000585375 NSD3Q9BZ95 1437 aa22.26■■□□□ 1.15
GHDC-204ENST00000585375 LTV1Q96GA3 475 aaPredicted RBP22.26■■□□□ 1.15
GHDC-204ENST00000585375 SMG6Q86US8 1419 aaKnown RBP22.25■■□□□ 1.15
GHDC-204ENST00000585375 FBLN1P23142 703 aa22.25■■□□□ 1.15
GHDC-204ENST00000585375 CARD14Q9BXL6 1004 aa22.25■■□□□ 1.15
GHDC-204ENST00000585375 RRS1Q15050 365 aaKnown RBP22.24■■□□□ 1.15
GHDC-204ENST00000585375 EIF4G2P78344 907 aaKnown RBP eCLIP22.23■■□□□ 1.15
GHDC-204ENST00000585375 PROM2Q8N271 834 aa22.23■■□□□ 1.15
GHDC-204ENST00000585375 INSRP06213 1382 aa22.23■■□□□ 1.15
GHDC-204ENST00000585375 FLT4P35916 1363 aa22.23■■□□□ 1.15
GHDC-204ENST00000585375 KCNQ2O43526 872 aa22.22■■□□□ 1.15
GHDC-204ENST00000585375 RGPD2P0DJD1 1756 aa22.22■■□□□ 1.15
GHDC-204ENST00000585375 TXNRD1Q16881 649 aa22.21■■□□□ 1.15
GHDC-204ENST00000585375 CGNL1Q0VF96 1302 aa22.2■■□□□ 1.14
GHDC-204ENST00000585375 BTAF1O14981 1849 aa22.2■■□□□ 1.14
GHDC-204ENST00000585375 ACSBG1Q96GR2 724 aa22.19■■□□□ 1.14
GHDC-204ENST00000585375 ANO8Q9HCE9 1232 aaPredicted RBP22.19■■□□□ 1.14
GHDC-204ENST00000585375 ANKRD26Q9UPS8 1709 aa22.18■■□□□ 1.14
GHDC-204ENST00000585375 MEGF6O75095 1541 aa22.18■■□□□ 1.14
GHDC-204ENST00000585375 NBPF6Q5VWK0 638 aa22.18■■□□□ 1.14
GHDC-204ENST00000585375 NBPF4Q96M43 638 aa22.18■■□□□ 1.14
GHDC-204ENST00000585375 HSPA5P11021 654 aaKnown RBP22.17■■□□□ 1.14
GHDC-204ENST00000585375 ZCRB1Q8TBF4 217 aaKnown RBP22.17■■□□□ 1.14
GHDC-204ENST00000585375 DDX54Q8TDD1 881 aaKnown RBP22.17■■□□□ 1.14
GHDC-204ENST00000585375 SPON1Q9HCB6 807 aa22.17■■□□□ 1.14
GHDC-204ENST00000585375 CASZ1Q86V15 1759 aa22.17■■□□□ 1.14
GHDC-204ENST00000585375 SHANK3Q9BYB0 1731 aa22.17■■□□□ 1.14
GHDC-204ENST00000585375 HSP90AB2PQ58FF8 381 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms