RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 RALBP1Q15311 655 aa19.74■□□□□ 0.75
SCAMP4-209ENST00000585335 IP6K1Q92551 441 aa19.74■□□□□ 0.75
SCAMP4-209ENST00000585335 BLMP54132 1417 aaPredicted RBP19.74■□□□□ 0.75
SCAMP4-209ENST00000585335 LMO7Q8WWI1 1683 aa19.74■□□□□ 0.75
SCAMP4-209ENST00000585335 FBLN1P23142 703 aa19.73■□□□□ 0.75
SCAMP4-209ENST00000585335 UNC5CLQ8IV45 518 aa19.73■□□□□ 0.75
SCAMP4-209ENST00000585335 PARD3Q8TEW0 1356 aa19.72■□□□□ 0.75
SCAMP4-209ENST00000585335 HOXC9P31274 260 aa19.72■□□□□ 0.75
SCAMP4-209ENST00000585335 STRN4Q9NRL3 753 aa19.72■□□□□ 0.75
SCAMP4-209ENST00000585335 POLKQ9UBT6 870 aa19.72■□□□□ 0.75
SCAMP4-209ENST00000585335 EMILIN1Q9Y6C2 1016 aa19.72■□□□□ 0.75
SCAMP4-209ENST00000585335 MAP2P11137 1827 aaKnown RBP19.72■□□□□ 0.75
SCAMP4-209ENST00000585335 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-209ENST00000585335 SMG6Q86US8 1419 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-209ENST00000585335 COL18A1P39060 1754 aa19.71■□□□□ 0.75
SCAMP4-209ENST00000585335 CAMTA1Q9Y6Y1 1673 aa19.71■□□□□ 0.75
SCAMP4-209ENST00000585335 CSB-PGBD3P0DP91 1061 aa19.7■□□□□ 0.74
SCAMP4-209ENST00000585335 TRPC5Q9UL62 973 aaPredicted RBP19.7■□□□□ 0.74
SCAMP4-209ENST00000585335 COL5A2P05997 1499 aaPredicted RBP19.7■□□□□ 0.74
SCAMP4-209ENST00000585335 BCL9LQ86UU0 1499 aa19.7■□□□□ 0.74
SCAMP4-209ENST00000585335 NRAPQ86VF7 1730 aa19.69■□□□□ 0.74
SCAMP4-209ENST00000585335 ANP32CO43423 234 aa19.69■□□□□ 0.74
SCAMP4-209ENST00000585335 AXIN2Q9Y2T1 843 aa19.69■□□□□ 0.74
SCAMP4-209ENST00000585335 CCDC9Q9Y3X0 531 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-209ENST00000585335 INSRP06213 1382 aa19.69■□□□□ 0.74
SCAMP4-209ENST00000585335 CDK12Q9NYV4 1490 aaPredicted RBP19.68■□□□□ 0.74
SCAMP4-209ENST00000585335 ANKRD24Q8TF21 1146 aa19.68■□□□□ 0.74
SCAMP4-209ENST00000585335 PPP2R1AP30153 589 aa19.67■□□□□ 0.74
SCAMP4-209ENST00000585335 MTHFSP49914 203 aa19.67■□□□□ 0.74
SCAMP4-209ENST00000585335 VPS72Q15906 364 aa19.67■□□□□ 0.74
SCAMP4-209ENST00000585335 CFAP53Q96M91 514 aa19.67■□□□□ 0.74
SCAMP4-209ENST00000585335 ERBB3P21860 1342 aa19.67■□□□□ 0.74
SCAMP4-209ENST00000585335 WDR17Q8IZU2 1322 aa19.67■□□□□ 0.74
SCAMP4-209ENST00000585335 PEAK1Q9H792 1746 aa19.67■□□□□ 0.74
SCAMP4-209ENST00000585335 SOCS7O14512 581 aa19.66■□□□□ 0.74
SCAMP4-209ENST00000585335 HSP90AB2PQ58FF8 381 aa19.66■□□□□ 0.74
SCAMP4-209ENST00000585335 LTV1Q96GA3 475 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-209ENST00000585335 PRKRIP1Q9H875 184 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-209ENST00000585335 QTRT2Q9H974 415 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-209ENST00000585335 ATRNO75882 1429 aa19.66■□□□□ 0.74
SCAMP4-209ENST00000585335 RGPD5Q99666 1765 aa19.65■□□□□ 0.74
SCAMP4-209ENST00000585335 TOM1L2Q6ZVM7 507 aa19.65■□□□□ 0.74
SCAMP4-209ENST00000585335 MYBBP1AQ9BQG0 1328 aaKnown RBP19.65■□□□□ 0.74
SCAMP4-209ENST00000585335 FAM208AQ9UK61 1670 aaKnown RBP19.65■□□□□ 0.74
SCAMP4-209ENST00000585335 CRB1P82279 1406 aa19.64■□□□□ 0.73
SCAMP4-209ENST00000585335 LARP1Q6PKG0 1096 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-209ENST00000585335 NLRP2Q9NX02 1062 aa19.63■□□□□ 0.73
SCAMP4-209ENST00000585335 SPATA31A5Q5VU36 1347 aa19.62■□□□□ 0.73
SCAMP4-209ENST00000585335 SPATA31A7Q8IWB4 1347 aa19.62■□□□□ 0.73
SCAMP4-209ENST00000585335 GJD4Q96KN9 370 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-209ENST00000585335 RBM6P78332 1123 aaKnown RBP19.61■□□□□ 0.73
SCAMP4-209ENST00000585335 CARD10Q9BWT7 1032 aa19.61■□□□□ 0.73
SCAMP4-209ENST00000585335 RGS17Q9UGC6 210 aaPredicted RBP19.61■□□□□ 0.73
SCAMP4-209ENST00000585335 SPATA31A1Q5TZJ5 1347 aa19.6■□□□□ 0.73
SCAMP4-209ENST00000585335 RXRBP28702 533 aa19.6■□□□□ 0.73
SCAMP4-209ENST00000585335 THRAP3Q9Y2W1 955 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-209ENST00000585335 DIAPH1O60610 1272 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-209ENST00000585335 EIF4A2Q14240 407 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-209ENST00000585335 TCP11L2Q8N4U5 519 aa19.59■□□□□ 0.73
SCAMP4-209ENST00000585335 USP35Q9P2H5 1018 aa19.59■□□□□ 0.73
SCAMP4-209ENST00000585335 DIEXFQ68CQ4 756 aaKnown RBP19.58■□□□□ 0.72
SCAMP4-209ENST00000585335 POTEAQ6S8J7 498 aa19.57■□□□□ 0.72
SCAMP4-209ENST00000585335 NUDCQ9Y266 331 aa19.57■□□□□ 0.72
SCAMP4-209ENST00000585335 A0A0G2JS52 829 aa19.55■□□□□ 0.72
SCAMP4-209ENST00000585335 MYT1Q01538 1121 aa19.55■□□□□ 0.72
SCAMP4-209ENST00000585335 BARGINQ6ZT62 677 aa19.55■□□□□ 0.72
SCAMP4-209ENST00000585335 CDCA7Q9BWT1 371 aaPredicted RBP19.55■□□□□ 0.72
SCAMP4-209ENST00000585335 GLI3P10071 1580 aa19.54■□□□□ 0.72
SCAMP4-209ENST00000585335 IL13P35225 146 aa19.54■□□□□ 0.72
SCAMP4-209ENST00000585335 COL3A1P02461 1466 aaPredicted RBP19.54■□□□□ 0.72
SCAMP4-209ENST00000585335 FAM98CQ17RN3 349 aaKnown RBP19.53■□□□□ 0.72
SCAMP4-209ENST00000585335 NBPF6Q5VWK0 638 aa19.53■□□□□ 0.72
SCAMP4-209ENST00000585335 NBPF4Q96M43 638 aa19.53■□□□□ 0.72
SCAMP4-209ENST00000585335 U2SURPO15042 1029 aaKnown RBP19.52■□□□□ 0.72
SCAMP4-209ENST00000585335 RAPGEF4Q8WZA2 1011 aa19.52■□□□□ 0.72
SCAMP4-209ENST00000585335 EYA1Q99502 592 aa19.52■□□□□ 0.72
SCAMP4-209ENST00000585335 IGSF1Q8N6C5 1336 aa19.51■□□□□ 0.71
SCAMP4-209ENST00000585335 IL2RBP14784 551 aa19.51■□□□□ 0.71
SCAMP4-209ENST00000585335 USHBP1Q8N6Y0 703 aa19.51■□□□□ 0.71
SCAMP4-209ENST00000585335 RGPD2P0DJD1 1756 aa19.51■□□□□ 0.71
SCAMP4-209ENST00000585335 ONECUT3O60422 494 aaPredicted RBP19.49■□□□□ 0.71
SCAMP4-209ENST00000585335 NCAPD2Q15021 1401 aa19.49■□□□□ 0.71
SCAMP4-209ENST00000585335 WNK3Q9BYP7 1800 aa19.48■□□□□ 0.71
SCAMP4-209ENST00000585335 TATP17735 454 aaPredicted RBP19.48■□□□□ 0.71
SCAMP4-209ENST00000585335 SEPT12Q8IYM1 358 aa19.48■□□□□ 0.71
SCAMP4-209ENST00000585335 U2AF1L5P0DN76 240 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-209ENST00000585335 U2AF1Q01081 240 aaKnown RBP eCLIP19.47■□□□□ 0.71
SCAMP4-209ENST00000585335 WDR43Q15061 677 aaKnown RBP eCLIP19.47■□□□□ 0.71
SCAMP4-209ENST00000585335 SULT6B1Q6IMI4 303 aa19.47■□□□□ 0.71
SCAMP4-209ENST00000585335 RGPD1P0DJD0 1748 aa19.47■□□□□ 0.71
SCAMP4-209ENST00000585335 PARP4Q9UKK3 1724 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-209ENST00000585335 THSD7AQ9UPZ6 1657 aa19.46■□□□□ 0.71
SCAMP4-209ENST00000585335 PLEKHG2Q9H7P9 1386 aa19.46■□□□□ 0.71
SCAMP4-209ENST00000585335 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
SCAMP4-209ENST00000585335 RGS12O14924 1447 aa19.46■□□□□ 0.71
SCAMP4-209ENST00000585335 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
SCAMP4-209ENST00000585335 DDB1Q16531 1140 aa19.45■□□□□ 0.7
SCAMP4-209ENST00000585335 KDRP35968 1356 aa19.44■□□□□ 0.7
SCAMP4-209ENST00000585335 OVOS2A0A0G2JMS6 1433 aa19.44■□□□□ 0.7
SCAMP4-209ENST00000585335 EXOC5O00471 708 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms