RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, human

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDEL1-219	ENST00000585098	COG3	Q96JB2	828 aa		32.85	■■■□□ 2.85
NDEL1-219	ENST00000585098	COL18A1	P39060	1754 aa		32.84	■■■□□ 2.85
NDEL1-219	ENST00000585098	CARD14	Q9BXL6	1004 aa		32.82	■■■□□ 2.84
NDEL1-219	ENST00000585098	FYB1	O15117	783 aa		32.81	■■■□□ 2.84
NDEL1-219	ENST00000585098	KRT27	Q7Z3Y8	459 aa		32.81	■■■□□ 2.84
NDEL1-219	ENST00000585098	BRWD3	Q6RI45	1802 aa		32.79	■■■□□ 2.84
NDEL1-219	ENST00000585098	TCP11L2	Q8N4U5	519 aa		32.79	■■■□□ 2.84
NDEL1-219	ENST00000585098	GGNBP2	Q9H3C7	697 aa		32.79	■■■□□ 2.84
NDEL1-219	ENST00000585098	CRB1	P82279	1406 aa		32.78	■■■□□ 2.84
NDEL1-219	ENST00000585098	NSD3	Q9BZ95	1437 aa		32.78	■■■□□ 2.84
NDEL1-219	ENST00000585098	C11orf95	C9JLR9	678 aa	Predicted RBP	32.78	■■■□□ 2.84
NDEL1-219	ENST00000585098	BARGIN	Q6ZT62	677 aa		32.78	■■■□□ 2.84
NDEL1-219	ENST00000585098	TOM1L2	Q6ZVM7	507 aa		32.77	■■■□□ 2.84
NDEL1-219	ENST00000585098	WDR17	Q8IZU2	1322 aa		32.77	■■■□□ 2.84
NDEL1-219	ENST00000585098	THSD7A	Q9UPZ6	1657 aa		32.76	■■■□□ 2.84
NDEL1-219	ENST00000585098	ABCC6	O95255	1503 aa		32.76	■■■□□ 2.83
NDEL1-219	ENST00000585098	THRAP3	Q9Y2W1	955 aa	Known RBP	32.75	■■■□□ 2.83
NDEL1-219	ENST00000585098	CSB-PGBD3	P0DP91	1061 aa		32.74	■■■□□ 2.83
NDEL1-219	ENST00000585098	LTN1	O94822	1766 aa		32.71	■■■□□ 2.83
NDEL1-219	ENST00000585098	RGPD5	Q99666	1765 aa		32.71	■■■□□ 2.83
NDEL1-219	ENST00000585098	FBLN1	P23142	703 aa		32.71	■■■□□ 2.83
NDEL1-219	ENST00000585098	EP400	Q96L91	3159 aa		32.71	■■■□□ 2.83
NDEL1-219	ENST00000585098	MAP3K19	Q56UN5	1328 aa		32.68	■■■□□ 2.82
NDEL1-219	ENST00000585098	KIF20B	Q96Q89	1820 aa		32.67	■■■□□ 2.82
NDEL1-219	ENST00000585098	IP6K1	Q92551	441 aa		32.67	■■■□□ 2.82
NDEL1-219	ENST00000585098	CARD10	Q9BWT7	1032 aa		32.67	■■■□□ 2.82
NDEL1-219	ENST00000585098	PANK3	Q9H999	370 aa		32.67	■■■□□ 2.82
NDEL1-219	ENST00000585098	FAM182B	Q5T319	152 aa		32.66	■■■□□ 2.82
NDEL1-219	ENST00000585098	ERBB3	P21860	1342 aa		32.66	■■■□□ 2.82
NDEL1-219	ENST00000585098	CGNL1	Q0VF96	1302 aa		32.66	■■■□□ 2.82
NDEL1-219	ENST00000585098	CCDC125	Q86Z20	511 aa		32.65	■■■□□ 2.82
NDEL1-219	ENST00000585098	ANKRD24	Q8TF21	1146 aa		32.65	■■■□□ 2.82
NDEL1-219	ENST00000585098	KIF7	Q2M1P5	1343 aa		32.65	■■■□□ 2.82
NDEL1-219	ENST00000585098	BLM	P54132	1417 aa	Predicted RBP	32.64	■■■□□ 2.82
NDEL1-219	ENST00000585098	AMPH	P49418	695 aa		32.63	■■■□□ 2.81
NDEL1-219	ENST00000585098	RRS1	Q15050	365 aa	Known RBP	32.63	■■■□□ 2.81
NDEL1-219	ENST00000585098	PDE3B	Q13370	1112 aa		32.62	■■■□□ 2.81
NDEL1-219	ENST00000585098	HOXC9	P31274	260 aa		32.61	■■■□□ 2.81
NDEL1-219	ENST00000585098	NLRP2	Q9NX02	1062 aa		32.61	■■■□□ 2.81
NDEL1-219	ENST00000585098	CCDC7	Q96M83	1385 aa		32.59	■■■□□ 2.81
NDEL1-219	ENST00000585098	LTV1	Q96GA3	475 aa	Predicted RBP	32.59	■■■□□ 2.81
NDEL1-219	ENST00000585098	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.57	■■■□□ 2.8
NDEL1-219	ENST00000585098	PARP4	Q9UKK3	1724 aa	Known RBP	32.57	■■■□□ 2.8
NDEL1-219	ENST00000585098	RTL1	A6NKG5	1358 aa		32.56	■■■□□ 2.8
NDEL1-219	ENST00000585098	SF3B2	Q13435	895 aa	Known RBP	32.55	■■■□□ 2.8
NDEL1-219	ENST00000585098	DDB1	Q16531	1140 aa		32.55	■■■□□ 2.8
NDEL1-219	ENST00000585098	FAM196A	Q6ZSG2	479 aa		32.54	■■■□□ 2.8
NDEL1-219	ENST00000585098	DISP2	A7MBM2	1401 aa		32.53	■■■□□ 2.8
NDEL1-219	ENST00000585098	WNK3	Q9BYP7	1800 aa		32.51	■■■□□ 2.79
NDEL1-219	ENST00000585098	LRRC37A3	O60309	1634 aa		32.51	■■■□□ 2.79
NDEL1-219	ENST00000585098	KNSTRN	Q9Y448	316 aa		32.49	■■■□□ 2.79
NDEL1-219	ENST00000585098	EMILIN1	Q9Y6C2	1016 aa		32.49	■■■□□ 2.79
NDEL1-219	ENST00000585098	KIF24	Q5T7B8	1368 aa		32.48	■■■□□ 2.79
NDEL1-219	ENST00000585098	WASHC2A	Q641Q2	1341 aa		32.48	■■■□□ 2.79
NDEL1-219	ENST00000585098	FLT4	P35916	1363 aa		32.47	■■■□□ 2.79
NDEL1-219	ENST00000585098	HSP90AB2P	Q58FF8	381 aa		32.47	■■■□□ 2.79
NDEL1-219	ENST00000585098	DEFB132	Q7Z7B7	95 aa		32.47	■■■□□ 2.79
NDEL1-219	ENST00000585098	NSD2	O96028	1365 aa		32.46	■■■□□ 2.79
NDEL1-219	ENST00000585098	EXOC5	O00471	708 aa		32.46	■■■□□ 2.79
NDEL1-219	ENST00000585098	IL2RB	P14784	551 aa		32.46	■■■□□ 2.79
NDEL1-219	ENST00000585098	TNNT2	P45379	298 aa	Predicted RBP	32.46	■■■□□ 2.79
NDEL1-219	ENST00000585098	PEAK1	Q9H792	1746 aa		32.46	■■■□□ 2.79
NDEL1-219	ENST00000585098	INSR	P06213	1382 aa		32.45	■■■□□ 2.79
NDEL1-219	ENST00000585098	PPM1G	O15355	546 aa	Predicted RBP	32.45	■■■□□ 2.79
NDEL1-219	ENST00000585098	TRIM37	O94972	964 aa		32.45	■■■□□ 2.79
NDEL1-219	ENST00000585098	FAM208A	Q9UK61	1670 aa	Known RBP	32.44	■■■□□ 2.78
NDEL1-219	ENST00000585098	SMG6	Q86US8	1419 aa	Known RBP	32.43	■■■□□ 2.78
NDEL1-219	ENST00000585098	ANKRD26	Q9UPS8	1709 aa		32.43	■■■□□ 2.78
NDEL1-219	ENST00000585098	OVOS2	A0A0G2JMS6	1433 aa		32.43	■■■□□ 2.78
NDEL1-219	ENST00000585098	MARCH10	Q8NA82	808 aa	Predicted RBP	32.42	■■■□□ 2.78
NDEL1-219	ENST00000585098	BAG6	P46379	1132 aa		32.41	■■■□□ 2.78
NDEL1-219	ENST00000585098	POLK	Q9UBT6	870 aa		32.41	■■■□□ 2.78
NDEL1-219	ENST00000585098	TNS2	Q63HR2	1409 aa		32.41	■■■□□ 2.78
NDEL1-219	ENST00000585098	RGPD1	P0DJD0	1748 aa		32.4	■■■□□ 2.78
NDEL1-219	ENST00000585098	NBPF6	Q5VWK0	638 aa		32.4	■■■□□ 2.78
NDEL1-219	ENST00000585098	MORC1	Q86VD1	984 aa		32.4	■■■□□ 2.78
NDEL1-219	ENST00000585098	NBPF4	Q96M43	638 aa		32.4	■■■□□ 2.78
NDEL1-219	ENST00000585098	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.38	■■■□□ 2.77
NDEL1-219	ENST00000585098	PER1	O15534	1290 aa	Predicted RBP	32.36	■■■□□ 2.77
NDEL1-219	ENST00000585098	USHBP1	Q8N6Y0	703 aa		32.36	■■■□□ 2.77
NDEL1-219	ENST00000585098	EN1	Q05925	392 aa	Predicted RBP	32.35	■■■□□ 2.77
NDEL1-219	ENST00000585098	RGPD2	P0DJD1	1756 aa		32.35	■■■□□ 2.77
NDEL1-219	ENST00000585098	TNS1	Q9HBL0	1735 aa	Known RBP	32.34	■■■□□ 2.77
NDEL1-219	ENST00000585098	MAP2	P11137	1827 aa	Known RBP	32.33	■■■□□ 2.77
NDEL1-219	ENST00000585098	APBA3	O96018	575 aa		32.33	■■■□□ 2.77
NDEL1-219	ENST00000585098	BCL9	O00512	1426 aa		32.31	■■■□□ 2.76
NDEL1-219	ENST00000585098	MEGF6	O75095	1541 aa		32.29	■■■□□ 2.76
NDEL1-219	ENST00000585098	CC2D1B	Q5T0F9	858 aa	Known RBP	32.27	■■■□□ 2.76
NDEL1-219	ENST00000585098	RAPGEF4	Q8WZA2	1011 aa		32.27	■■■□□ 2.76
NDEL1-219	ENST00000585098	EZH2	Q15910	746 aa	Known RBP	32.26	■■■□□ 2.75
NDEL1-219	ENST00000585098	DDX54	Q8TDD1	881 aa	Known RBP	32.26	■■■□□ 2.75
NDEL1-219	ENST00000585098	CAMKK2	Q96RR4	588 aa		32.25	■■■□□ 2.75
NDEL1-219	ENST00000585098	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.25	■■■□□ 2.75
NDEL1-219	ENST00000585098	EIF4A2	Q14240	407 aa	Known RBP	32.24	■■■□□ 2.75
NDEL1-219	ENST00000585098	PTF1A	Q7RTS3	328 aa		32.24	■■■□□ 2.75
NDEL1-219	ENST00000585098	ZCRB1	Q8TBF4	217 aa	Known RBP	32.24	■■■□□ 2.75
NDEL1-219	ENST00000585098	TAT	P17735	454 aa	Predicted RBP	32.23	■■■□□ 2.75
NDEL1-219	ENST00000585098	SBF2	Q86WG5	1849 aa		32.22	■■■□□ 2.75
NDEL1-219	ENST00000585098	EYA1	Q99502	592 aa		32.22	■■■□□ 2.75
NDEL1-219	ENST00000585098	CNGB1	Q14028	1251 aa	Predicted RBP	32.21	■■■□□ 2.75

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