RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 AXIN2Q9Y2T1 843 aa22.53■■□□□ 1.2
ERBB2-222ENST00000584908 NSD3Q9BZ95 1437 aa22.52■■□□□ 1.2
ERBB2-222ENST00000584908 EVA1CP58658 441 aa22.52■■□□□ 1.2
ERBB2-222ENST00000584908 SOX12O15370 315 aa22.51■■□□□ 1.19
ERBB2-222ENST00000584908 LARP1Q6PKG0 1096 aaKnown RBP22.51■■□□□ 1.19
ERBB2-222ENST00000584908 SEPT12Q8IYM1 358 aa22.51■■□□□ 1.19
ERBB2-222ENST00000584908 CRB1P82279 1406 aa22.5■■□□□ 1.19
ERBB2-222ENST00000584908 ZBTB7CA1YPR0 619 aa22.49■■□□□ 1.19
ERBB2-222ENST00000584908 KIF7Q2M1P5 1343 aa22.48■■□□□ 1.19
ERBB2-222ENST00000584908 FAM98CQ17RN3 349 aaKnown RBP22.48■■□□□ 1.19
ERBB2-222ENST00000584908 BARGINQ6ZT62 677 aa22.48■■□□□ 1.19
ERBB2-222ENST00000584908 POLR3GLQ9BT43 218 aa22.48■■□□□ 1.19
ERBB2-222ENST00000584908 WDR17Q8IZU2 1322 aa22.47■■□□□ 1.19
ERBB2-222ENST00000584908 UPF1Q92900 1129 aaKnown RBP eCLIP22.47■■□□□ 1.195e-6■□□□□ 8.7
ERBB2-222ENST00000584908 GGNBP2Q9H3C7 697 aa22.47■■□□□ 1.19
ERBB2-222ENST00000584908 THRAP3Q9Y2W1 955 aaKnown RBP22.47■■□□□ 1.19
ERBB2-222ENST00000584908 ANKRD26Q9UPS8 1709 aa22.47■■□□□ 1.19
ERBB2-222ENST00000584908 CGNL1Q0VF96 1302 aa22.45■■□□□ 1.19
ERBB2-222ENST00000584908 BLMP54132 1417 aaPredicted RBP22.45■■□□□ 1.19
ERBB2-222ENST00000584908 WNK3Q9BYP7 1800 aa22.45■■□□□ 1.19
ERBB2-222ENST00000584908 TCP11L2Q8N4U5 519 aa22.45■■□□□ 1.18
ERBB2-222ENST00000584908 PANK3Q9H999 370 aa22.44■■□□□ 1.18
ERBB2-222ENST00000584908 PARP4Q9UKK3 1724 aaKnown RBP22.44■■□□□ 1.18
ERBB2-222ENST00000584908 ERBB3P21860 1342 aa22.43■■□□□ 1.18
ERBB2-222ENST00000584908 MAP3K19Q56UN5 1328 aa22.43■■□□□ 1.18
ERBB2-222ENST00000584908 FAM208AQ9UK61 1670 aaKnown RBP22.42■■□□□ 1.18
ERBB2-222ENST00000584908 IP6K1Q92551 441 aa22.42■■□□□ 1.18
ERBB2-222ENST00000584908 RTL1A6NKG5 1358 aa22.41■■□□□ 1.18
ERBB2-222ENST00000584908 KRT27Q7Z3Y8 459 aa22.41■■□□□ 1.18
ERBB2-222ENST00000584908 USP35Q9P2H5 1018 aa22.41■■□□□ 1.18
ERBB2-222ENST00000584908 TOM1L2Q6ZVM7 507 aa22.4■■□□□ 1.18
ERBB2-222ENST00000584908 CARD10Q9BWT7 1032 aa22.4■■□□□ 1.18
ERBB2-222ENST00000584908 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
ERBB2-222ENST00000584908 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
ERBB2-222ENST00000584908 FBLN1P23142 703 aa22.39■■□□□ 1.18
ERBB2-222ENST00000584908 NSD2O96028 1365 aa22.39■■□□□ 1.17
ERBB2-222ENST00000584908 A0A0G2JS52 829 aa22.38■■□□□ 1.17
ERBB2-222ENST00000584908 MYT1Q01538 1121 aa22.38■■□□□ 1.17
ERBB2-222ENST00000584908 MAP2P11137 1827 aaKnown RBP22.38■■□□□ 1.17
ERBB2-222ENST00000584908 PEAK1Q9H792 1746 aa22.38■■□□□ 1.17
ERBB2-222ENST00000584908 HOXC9P31274 260 aa22.37■■□□□ 1.17
ERBB2-222ENST00000584908 WASHC2AQ641Q2 1341 aa22.37■■□□□ 1.17
ERBB2-222ENST00000584908 LRRC37A3O60309 1634 aa22.36■■□□□ 1.17
ERBB2-222ENST00000584908 CSB-PGBD3P0DP91 1061 aa22.36■■□□□ 1.17
ERBB2-222ENST00000584908 ANKRD24Q8TF21 1146 aa22.36■■□□□ 1.17
ERBB2-222ENST00000584908 DISP2A7MBM2 1401 aa22.36■■□□□ 1.17
ERBB2-222ENST00000584908 RRS1Q15050 365 aaKnown RBP22.35■■□□□ 1.17
ERBB2-222ENST00000584908 AMPHP49418 695 aa22.34■■□□□ 1.17
ERBB2-222ENST00000584908 CCDC125Q86Z20 511 aa22.34■■□□□ 1.17
ERBB2-222ENST00000584908 CDCA7Q9BWT1 371 aaPredicted RBP22.34■■□□□ 1.17
ERBB2-222ENST00000584908 FLT4P35916 1363 aa22.32■■□□□ 1.16
ERBB2-222ENST00000584908 PER1O15534 1290 aaPredicted RBP22.32■■□□□ 1.16
ERBB2-222ENST00000584908 KNSTRNQ9Y448 316 aa22.32■■□□□ 1.16
ERBB2-222ENST00000584908 RGPD2P0DJD1 1756 aa22.32■■□□□ 1.16
ERBB2-222ENST00000584908 INSRP06213 1382 aa22.32■■□□□ 1.16
ERBB2-222ENST00000584908 AMER1Q5JTC6 1135 aaPredicted RBP22.31■■□□□ 1.16
ERBB2-222ENST00000584908 NLRP2Q9NX02 1062 aa22.31■■□□□ 1.16
ERBB2-222ENST00000584908 EMILIN1Q9Y6C2 1016 aa22.29■■□□□ 1.16
ERBB2-222ENST00000584908 RGPD1P0DJD0 1748 aa22.28■■□□□ 1.16
ERBB2-222ENST00000584908 PDE3BQ13370 1112 aa22.28■■□□□ 1.16
ERBB2-222ENST00000584908 DDB1Q16531 1140 aa22.27■■□□□ 1.16
ERBB2-222ENST00000584908 HSP90AB2PQ58FF8 381 aa22.27■■□□□ 1.16
ERBB2-222ENST00000584908 FAM196AQ6ZSG2 479 aa22.27■■□□□ 1.16
ERBB2-222ENST00000584908 POLKQ9UBT6 870 aa22.27■■□□□ 1.16
ERBB2-222ENST00000584908 SMG6Q86US8 1419 aaKnown RBP22.26■■□□□ 1.15
ERBB2-222ENST00000584908 NPC1L1Q9UHC9 1359 aa22.26■■□□□ 1.15
ERBB2-222ENST00000584908 FAM182BQ5T319 152 aa22.26■■□□□ 1.15
ERBB2-222ENST00000584908 TNS2Q63HR2 1409 aa22.26■■□□□ 1.15
ERBB2-222ENST00000584908 TNS1Q9HBL0 1735 aaKnown RBP22.25■■□□□ 1.15
ERBB2-222ENST00000584908 LTV1Q96GA3 475 aaPredicted RBP22.25■■□□□ 1.15
ERBB2-222ENST00000584908 BCL9O00512 1426 aa22.24■■□□□ 1.15
ERBB2-222ENST00000584908 SBF2Q86WG5 1849 aa22.24■■□□□ 1.15
ERBB2-222ENST00000584908 IL2RBP14784 551 aa22.24■■□□□ 1.15
ERBB2-222ENST00000584908 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
ERBB2-222ENST00000584908 MORC1Q86VD1 984 aa22.23■■□□□ 1.15
ERBB2-222ENST00000584908 NCAPD2Q15021 1401 aa22.22■■□□□ 1.15
ERBB2-222ENST00000584908 NBPF6Q5VWK0 638 aa22.22■■□□□ 1.15
ERBB2-222ENST00000584908 NBPF4Q96M43 638 aa22.22■■□□□ 1.15
ERBB2-222ENST00000584908 EXOC5O00471 708 aa22.21■■□□□ 1.15
ERBB2-222ENST00000584908 ZEB1P37275 1124 aaPredicted RBP22.2■■□□□ 1.14
ERBB2-222ENST00000584908 TNNT2P45379 298 aaPredicted RBP22.2■■□□□ 1.14
ERBB2-222ENST00000584908 MARCH10Q8NA82 808 aaPredicted RBP22.2■■□□□ 1.14
ERBB2-222ENST00000584908 PPM1GO15355 546 aaPredicted RBP22.18■■□□□ 1.14
ERBB2-222ENST00000584908 SF3B2Q13435 895 aaKnown RBP22.18■■□□□ 1.14
ERBB2-222ENST00000584908 SHANK3Q9BYB0 1731 aa22.18■■□□□ 1.14
ERBB2-222ENST00000584908 MEGF6O75095 1541 aa22.17■■□□□ 1.14
ERBB2-222ENST00000584908 TRIM37O94972 964 aa22.14■■□□□ 1.14
ERBB2-222ENST00000584908 BAG6P46379 1132 aa22.13■■□□□ 1.13
ERBB2-222ENST00000584908 EIF4A2Q14240 407 aaKnown RBP22.13■■□□□ 1.13
ERBB2-222ENST00000584908 DEFB132Q7Z7B7 95 aa22.13■■□□□ 1.13
ERBB2-222ENST00000584908 CC2D1BQ5T0F9 858 aaKnown RBP22.12■■□□□ 1.13
ERBB2-222ENST00000584908 USHBP1Q8N6Y0 703 aa22.12■■□□□ 1.13
ERBB2-222ENST00000584908 PKD1L3Q7Z443 1732 aa22.12■■□□□ 1.13
ERBB2-222ENST00000584908 RGPD3A6NKT7 1758 aaPredicted RBP22.12■■□□□ 1.13
ERBB2-222ENST00000584908 RGPD4Q7Z3J3 1758 aa22.12■■□□□ 1.13
ERBB2-222ENST00000584908 EYA1Q99502 592 aa22.11■■□□□ 1.13
ERBB2-222ENST00000584908 NHSQ6T4R5 1651 aa22.11■■□□□ 1.13
ERBB2-222ENST00000584908 RAPGEF4Q8WZA2 1011 aa22.1■■□□□ 1.13
ERBB2-222ENST00000584908 PLEKHG2Q9H7P9 1386 aa22.1■■□□□ 1.13
ERBB2-222ENST00000584908 IGSF1Q8N6C5 1336 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms