RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 RAB15P59190 212 aa7.5□□□□□ -1.21
PPP4R1-229ENST00000584754 MPNDQ8N594 471 aa7.5□□□□□ -1.21
PPP4R1-229ENST00000584754 KIFC2Q96AC6 838 aa7.5□□□□□ -1.21
PPP4R1-229ENST00000584754 FBXO45P0C2W1 286 aa7.49□□□□□ -1.21
PPP4R1-229ENST00000584754 ITPKCQ96DU7 683 aa7.49□□□□□ -1.21
PPP4R1-229ENST00000584754 TBC1D2BQ9UPU7 963 aa7.49□□□□□ -1.21
PPP4R1-229ENST00000584754 TIMP2P16035 220 aa7.48□□□□□ -1.21
PPP4R1-229ENST00000584754 TRMT44Q8IYL2 757 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-229ENST00000584754 SLC16A10Q8TF71 515 aa7.48□□□□□ -1.21
PPP4R1-229ENST00000584754 KLF16Q9BXK1 252 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-229ENST00000584754 ZC3H4Q9UPT8 1303 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-229ENST00000584754 ZIC2O95409 532 aaPredicted RBP7.47□□□□□ -1.21
PPP4R1-229ENST00000584754 NR5A1Q13285 461 aa7.47□□□□□ -1.21
PPP4R1-229ENST00000584754 TRIM46Q7Z4K8 759 aa7.47□□□□□ -1.21
PPP4R1-229ENST00000584754 SLC10A4Q96EP9 437 aa7.47□□□□□ -1.21
PPP4R1-229ENST00000584754 KCTD15Q96SI1 283 aaPredicted RBP7.47□□□□□ -1.21
PPP4R1-229ENST00000584754 FAM181BA6NEQ2 426 aa7.46□□□□□ -1.22
PPP4R1-229ENST00000584754 ZBBXA8MT70 800 aa7.46□□□□□ -1.22
PPP4R1-229ENST00000584754 APBB1O00213 710 aa7.46□□□□□ -1.22
PPP4R1-229ENST00000584754 DZIP3Q86Y13 1208 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-229ENST00000584754 GDPD2Q9HCC8 539 aa7.46□□□□□ -1.22
PPP4R1-229ENST00000584754 GPSM3Q9Y4H4 160 aa7.46□□□□□ -1.22
PPP4R1-229ENST00000584754 PCDHB9Q9Y5E1 797 aa7.46□□□□□ -1.22
PPP4R1-229ENST00000584754 NDUFB9Q9Y6M9 179 aa7.46□□□□□ -1.22
PPP4R1-229ENST00000584754 MAP4K5Q9Y4K4 846 aa7.45□□□□□ -1.22
PPP4R1-229ENST00000584754 CBLBQ13191 982 aa7.44□□□□□ -1.22
PPP4R1-229ENST00000584754 INTS6LQ5JSJ4 861 aaKnown RBP7.44□□□□□ -1.22
PPP4R1-229ENST00000584754 PPP1R26Q5T8A7 1209 aaPredicted RBP7.44□□□□□ -1.22
PPP4R1-229ENST00000584754 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
PPP4R1-229ENST00000584754 CCDC116Q8IYX3 515 aa7.44□□□□□ -1.22
PPP4R1-229ENST00000584754 TMPRSS4Q9NRS4 437 aa7.44□□□□□ -1.22
PPP4R1-229ENST00000584754 GIGYF1O75420 1035 aaPredicted RBP7.43□□□□□ -1.22
PPP4R1-229ENST00000584754 ABL2P42684 1182 aa7.43□□□□□ -1.22
PPP4R1-229ENST00000584754 IRF5Q13568 498 aa7.43□□□□□ -1.22
PPP4R1-229ENST00000584754 MCM6Q14566 821 aa7.43□□□□□ -1.22
PPP4R1-229ENST00000584754 PURBQ96QR8 312 aaKnown RBP7.43□□□□□ -1.22
PPP4R1-229ENST00000584754 NR1H3Q13133 447 aa7.42□□□□□ -1.22
PPP4R1-229ENST00000584754 C6orf118Q5T5N4 469 aa7.42□□□□□ -1.22
PPP4R1-229ENST00000584754 POM121Q96HA1 1249 aa7.42□□□□□ -1.22
PPP4R1-229ENST00000584754 ZFP42Q96MM3 310 aa7.42□□□□□ -1.22
PPP4R1-229ENST00000584754 PRM3Q9NNZ6 103 aa7.42□□□□□ -1.22
PPP4R1-229ENST00000584754 NXF1Q9UBU9 619 aaKnown RBP7.42□□□□□ -1.22
PPP4R1-229ENST00000584754 MRPL14Q6P1L8 145 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-229ENST00000584754 SOBPA7XYQ1 873 aa7.4□□□□□ -1.22
PPP4R1-229ENST00000584754 ERVH48-1M5A8F1 160 aa7.4□□□□□ -1.22
PPP4R1-229ENST00000584754 GMPRP36959 345 aa7.4□□□□□ -1.22
PPP4R1-229ENST00000584754 VEGFBP49765 207 aa7.4□□□□□ -1.22
PPP4R1-229ENST00000584754 VAC14Q08AM6 782 aa7.4□□□□□ -1.22
PPP4R1-229ENST00000584754 IRF7Q92985 503 aa7.4□□□□□ -1.22
PPP4R1-229ENST00000584754 AGBL1Q96MI9 1066 aa7.4□□□□□ -1.22
PPP4R1-229ENST00000584754 EMILIN1Q9Y6C2 1016 aa7.39□□□□□ -1.23
PPP4R1-229ENST00000584754 SOCS7O14512 581 aa7.38□□□□□ -1.23
PPP4R1-229ENST00000584754 ADD1P35611 737 aaKnown RBP7.38□□□□□ -1.23
PPP4R1-229ENST00000584754 NBPF20Q3BBV1 942 aa7.38□□□□□ -1.23
PPP4R1-229ENST00000584754 ZSCAN1Q8NBB4 408 aa7.38□□□□□ -1.23
PPP4R1-229ENST00000584754 ZNF784Q8NCA9 323 aaPredicted RBP7.38□□□□□ -1.23
PPP4R1-229ENST00000584754 CDV3Q9UKY7 258 aaKnown RBP7.38□□□□□ -1.23
PPP4R1-229ENST00000584754 COG6Q9Y2V7 657 aa7.38□□□□□ -1.23
PPP4R1-229ENST00000584754 ESPNB1AK53 854 aa7.37□□□□□ -1.23
PPP4R1-229ENST00000584754 BMP2P12643 396 aa7.37□□□□□ -1.23
PPP4R1-229ENST00000584754 TSGA10IPQ3SY00 556 aa7.37□□□□□ -1.23
PPP4R1-229ENST00000584754 CYLDQ9NQC7 956 aa7.37□□□□□ -1.23
PPP4R1-229ENST00000584754 PGPEP1Q9NXJ5 209 aa7.37□□□□□ -1.23
PPP4R1-229ENST00000584754 RELBQ01201 579 aa7.36□□□□□ -1.23
PPP4R1-229ENST00000584754 SCARF1Q14162 830 aa7.36□□□□□ -1.23
PPP4R1-229ENST00000584754 MEIOBQ8N635 442 aa7.36□□□□□ -1.23
PPP4R1-229ENST00000584754 ZNF592Q92610 1267 aa7.36□□□□□ -1.23
PPP4R1-229ENST00000584754 TRIM52Q96A61 297 aa7.36□□□□□ -1.23
PPP4R1-229ENST00000584754 ZNF395Q9H8N7 513 aaPredicted RBP7.36□□□□□ -1.23
PPP4R1-229ENST00000584754 GTF3C3Q9Y5Q9 886 aa7.36□□□□□ -1.23
PPP4R1-229ENST00000584754 LILRA1O75019 489 aa7.35□□□□□ -1.23
PPP4R1-229ENST00000584754 DHX9Q08211 1270 aaKnown RBP7.35□□□□□ -1.23
PPP4R1-229ENST00000584754 LINC00528Q8N1L1 170 aa7.35□□□□□ -1.23
PPP4R1-229ENST00000584754 CEP126Q9P2H0 1117 aa7.35□□□□□ -1.23
PPP4R1-229ENST00000584754 Q6ZVU0 165 aa7.34□□□□□ -1.23
PPP4R1-229ENST00000584754 NPAS3Q8IXF0 933 aa7.34□□□□□ -1.23
PPP4R1-229ENST00000584754 ZNF330Q9Y3S2 320 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-229ENST00000584754 FIGNL2A6NMB9 653 aa7.33□□□□□ -1.24
PPP4R1-229ENST00000584754 UPP2O95045 317 aa7.33□□□□□ -1.24
PPP4R1-229ENST00000584754 SCTRP47872 440 aa7.33□□□□□ -1.24
PPP4R1-229ENST00000584754 KDF1Q8NAX2 398 aaPredicted RBP7.33□□□□□ -1.24
PPP4R1-229ENST00000584754 CLUAP1Q96AJ1 413 aa7.33□□□□□ -1.24
PPP4R1-229ENST00000584754 CDCA7Q9BWT1 371 aaPredicted RBP7.33□□□□□ -1.24
PPP4R1-229ENST00000584754 H3BM21 787 aa7.32□□□□□ -1.24
PPP4R1-229ENST00000584754 UBTFP17480 764 aaKnown RBP7.32□□□□□ -1.24
PPP4R1-229ENST00000584754 CCDC85AQ96PX6 553 aaPredicted RBP7.32□□□□□ -1.24
PPP4R1-229ENST00000584754 INSM2Q96T92 566 aaPredicted RBP7.32□□□□□ -1.24
PPP4R1-229ENST00000584754 PCDHB11Q9Y5F2 797 aa7.32□□□□□ -1.24
PPP4R1-229ENST00000584754 EIF4G2P78344 907 aaKnown RBP eCLIP7.31□□□□□ -1.24
PPP4R1-229ENST00000584754 TSEN34Q9BSV6 310 aaKnown RBP7.31□□□□□ -1.24
PPP4R1-229ENST00000584754 ERBB4Q15303 1308 aa7.3□□□□□ -1.24
PPP4R1-229ENST00000584754 POM121CA8CG34 1229 aa7.3□□□□□ -1.24
PPP4R1-229ENST00000584754 MAN1A2O60476 641 aa7.3□□□□□ -1.24
PPP4R1-229ENST00000584754 CTSOP43234 321 aaPredicted RBP7.3□□□□□ -1.24
PPP4R1-229ENST00000584754 FLIIQ13045 1269 aa7.3□□□□□ -1.24
PPP4R1-229ENST00000584754 SEPT12Q8IYM1 358 aa7.3□□□□□ -1.24
PPP4R1-229ENST00000584754 DNMT3LQ9UJW3 386 aa7.3□□□□□ -1.24
PPP4R1-229ENST00000584754 SOS2Q07890 1332 aaPredicted RBP7.29□□□□□ -1.24
PPP4R1-229ENST00000584754 TTLL8A6PVC2 850 aa7.28□□□□□ -1.24
PPP4R1-229ENST00000584754 PIK3CDO00329 1044 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms