RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SYT17Q9BSW7 474 aa20.76■□□□□ 0.91
CSNK1D-224ENST00000584672 STK32BQ9NY57 414 aa20.76■□□□□ 0.91
CSNK1D-224ENST00000584672 C1QTNF8P60827 252 aa20.75■□□□□ 0.91
CSNK1D-224ENST00000584672 MARCH10Q8NA82 808 aaPredicted RBP20.75■□□□□ 0.91
CSNK1D-224ENST00000584672 PPIP5K1Q6PFW1 1433 aa20.73■□□□□ 0.91
CSNK1D-224ENST00000584672 TXNRD1Q16881 649 aa20.73■□□□□ 0.91
CSNK1D-224ENST00000584672 SRPK2P78362 688 aaKnown RBP20.72■□□□□ 0.91
CSNK1D-224ENST00000584672 SLC15A2Q16348 729 aa20.71■□□□□ 0.91
CSNK1D-224ENST00000584672 AATKQ6ZMQ8 1374 aa20.71■□□□□ 0.91
CSNK1D-224ENST00000584672 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
CSNK1D-224ENST00000584672 COL18A1P39060 1754 aa20.7■□□□□ 0.9
CSNK1D-224ENST00000584672 RGPD5Q99666 1765 aa20.7■□□□□ 0.9
CSNK1D-224ENST00000584672 NLRP6P59044 892 aa20.7■□□□□ 0.9
CSNK1D-224ENST00000584672 SLIT3O75094 1523 aa20.69■□□□□ 0.9
CSNK1D-224ENST00000584672 MTFR1LQ9H019 292 aa20.69■□□□□ 0.9
CSNK1D-224ENST00000584672 CABP2Q9NPB3 220 aa20.69■□□□□ 0.9
CSNK1D-224ENST00000584672 AXIN2Q9Y2T1 843 aa20.68■□□□□ 0.9
CSNK1D-224ENST00000584672 SGIP1Q9BQI5 828 aa20.67■□□□□ 0.9
CSNK1D-224ENST00000584672 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
CSNK1D-224ENST00000584672 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
CSNK1D-224ENST00000584672 SOX12O15370 315 aa20.66■□□□□ 0.9
CSNK1D-224ENST00000584672 USP6P35125 1406 aa20.65■□□□□ 0.9
CSNK1D-224ENST00000584672 CSB-PGBD3P0DP91 1061 aa20.65■□□□□ 0.9
CSNK1D-224ENST00000584672 ARXQ96QS3 562 aa20.65■□□□□ 0.9
CSNK1D-224ENST00000584672 IFFO2Q5TF58 517 aa20.64■□□□□ 0.89
CSNK1D-224ENST00000584672 KLHL34Q8N239 644 aa20.64■□□□□ 0.89
CSNK1D-224ENST00000584672 ACSBG1Q96GR2 724 aa20.64■□□□□ 0.89
CSNK1D-224ENST00000584672 BCL9O00512 1426 aa20.63■□□□□ 0.89
CSNK1D-224ENST00000584672 CPSF1Q10570 1443 aaKnown RBP20.63■□□□□ 0.89
CSNK1D-224ENST00000584672 STAC3Q96MF2 364 aa20.63■□□□□ 0.89
CSNK1D-224ENST00000584672 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
CSNK1D-224ENST00000584672 GPR162Q16538 588 aa20.62■□□□□ 0.89
CSNK1D-224ENST00000584672 NBPF1Q3BBV0 1214 aa20.62■□□□□ 0.89
CSNK1D-224ENST00000584672 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
CSNK1D-224ENST00000584672 CABP1Q9NZU7 370 aa20.62■□□□□ 0.89
CSNK1D-224ENST00000584672 QRICH2Q9H0J4 1663 aa20.61■□□□□ 0.89
CSNK1D-224ENST00000584672 CDCA7Q9BWT1 371 aaPredicted RBP20.61■□□□□ 0.89
CSNK1D-224ENST00000584672 KIAA1210Q9ULL0 1709 aa20.61■□□□□ 0.89
CSNK1D-224ENST00000584672 EXOC5O00471 708 aa20.6■□□□□ 0.89
CSNK1D-224ENST00000584672 GIGYF1O75420 1035 aaPredicted RBP20.6■□□□□ 0.89
CSNK1D-224ENST00000584672 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
CSNK1D-224ENST00000584672 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
CSNK1D-224ENST00000584672 CENPJQ9HC77 1338 aaPredicted RBP20.59■□□□□ 0.89
CSNK1D-224ENST00000584672 CARD10Q9BWT7 1032 aa20.59■□□□□ 0.89
CSNK1D-224ENST00000584672 ZNF827Q17R98 1081 aa20.58■□□□□ 0.89
CSNK1D-224ENST00000584672 TNS2Q63HR2 1409 aa20.58■□□□□ 0.88
CSNK1D-224ENST00000584672 BTAF1O14981 1849 aa20.57■□□□□ 0.88
CSNK1D-224ENST00000584672 ARHGEF25Q86VW2 580 aa20.57■□□□□ 0.88
CSNK1D-224ENST00000584672 KAT6BQ8WYB5 2073 aa20.57■□□□□ 0.88
CSNK1D-224ENST00000584672 MAP3K5Q99683 1374 aa20.56■□□□□ 0.88
CSNK1D-224ENST00000584672 TRPM1Q7Z4N2 1603 aa20.55■□□□□ 0.88
CSNK1D-224ENST00000584672 SHANK3Q9BYB0 1731 aa20.54■□□□□ 0.88
CSNK1D-224ENST00000584672 CCDC7Q96M83 1385 aa20.53■□□□□ 0.88
CSNK1D-224ENST00000584672 ABCC6O95255 1503 aa20.52■□□□□ 0.87
CSNK1D-224ENST00000584672 TTC21BQ7Z4L5 1316 aa20.52■□□□□ 0.87
CSNK1D-224ENST00000584672 KCNH5Q8NCM2 988 aa20.51■□□□□ 0.87
CSNK1D-224ENST00000584672 LRRC4BQ9NT99 713 aa20.51■□□□□ 0.87
CSNK1D-224ENST00000584672 NFAT5O94916 1531 aa20.51■□□□□ 0.87
CSNK1D-224ENST00000584672 CEP350Q5VT06 3117 aa20.5■□□□□ 0.87
CSNK1D-224ENST00000584672 NLGN2Q8NFZ4 835 aa20.5■□□□□ 0.87
CSNK1D-224ENST00000584672 TUBGCP6Q96RT7 1819 aa20.49■□□□□ 0.87
CSNK1D-224ENST00000584672 POLD1P28340 1107 aa20.48■□□□□ 0.87
CSNK1D-224ENST00000584672 NLRP2Q9NX02 1062 aa20.48■□□□□ 0.87
CSNK1D-224ENST00000584672 GOLGB1Q14789 3259 aaKnown RBP20.47■□□□□ 0.87
CSNK1D-224ENST00000584672 QSER1Q2KHR3 1735 aa20.46■□□□□ 0.87
CSNK1D-224ENST00000584672 KCNQ4P56696 695 aa20.45■□□□□ 0.86
CSNK1D-224ENST00000584672 AKT1S1Q96B36 256 aa20.45■□□□□ 0.86
CSNK1D-224ENST00000584672 PNPLA7Q6ZV29 1317 aa20.45■□□□□ 0.86
CSNK1D-224ENST00000584672 IL2RBP14784 551 aa20.44■□□□□ 0.86
CSNK1D-224ENST00000584672 LTN1O94822 1766 aa20.44■□□□□ 0.86
CSNK1D-224ENST00000584672 YBX3P16989 372 aaKnown RBP eCLIP20.43■□□□□ 0.862e-6■□□□□ 10.5
CSNK1D-224ENST00000584672 COL24A1Q17RW2 1714 aa20.43■□□□□ 0.86
CSNK1D-224ENST00000584672 EVC2Q86UK5 1308 aa20.43■□□□□ 0.86
CSNK1D-224ENST00000584672 SLC16A10Q8TF71 515 aa20.42■□□□□ 0.86
CSNK1D-224ENST00000584672 ERBB3P21860 1342 aa20.42■□□□□ 0.86
CSNK1D-224ENST00000584672 TTC21AQ8NDW8 1320 aa20.42■□□□□ 0.86
CSNK1D-224ENST00000584672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.41■□□□□ 0.862e-7■■□□□ 13.2
CSNK1D-224ENST00000584672 ZNF692Q9BU19 519 aaPredicted RBP20.41■□□□□ 0.86
CSNK1D-224ENST00000584672 TFCP2L1Q9NZI6 479 aa20.41■□□□□ 0.86
CSNK1D-224ENST00000584672 KTN1Q86UP2 1357 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-224ENST00000584672 ATP10DQ9P241 1426 aa20.4■□□□□ 0.86
CSNK1D-224ENST00000584672 DDX54Q8TDD1 881 aaKnown RBP20.39■□□□□ 0.85
CSNK1D-224ENST00000584672 MON2Q7Z3U7 1717 aa20.39■□□□□ 0.85
CSNK1D-224ENST00000584672 MSH5O43196 834 aa20.38■□□□□ 0.85
CSNK1D-224ENST00000584672 ANKRD24Q8TF21 1146 aa20.38■□□□□ 0.85
CSNK1D-224ENST00000584672 SYTL4Q96C24 671 aaPredicted RBP20.38■□□□□ 0.85
CSNK1D-224ENST00000584672 DOT1LQ8TEK3 1739 aa20.37■□□□□ 0.85
CSNK1D-224ENST00000584672 SLC27A3Q5K4L6 730 aa20.36■□□□□ 0.85
CSNK1D-224ENST00000584672 MSL1Q68DK7 614 aa20.36■□□□□ 0.85
CSNK1D-224ENST00000584672 NME9Q86XW9 330 aa20.36■□□□□ 0.85
CSNK1D-224ENST00000584672 ZNF526Q8TF50 670 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-224ENST00000584672 GRIN3BO60391 1043 aa20.35■□□□□ 0.85
CSNK1D-224ENST00000584672 LY75O60449 1722 aa20.33■□□□□ 0.85
CSNK1D-224ENST00000584672 USP54Q70EL1 1684 aa20.32■□□□□ 0.84
CSNK1D-224ENST00000584672 PRIM1P49642 420 aaKnown RBP20.32■□□□□ 0.84
CSNK1D-224ENST00000584672 LTV1Q96GA3 475 aaPredicted RBP20.32■□□□□ 0.84
CSNK1D-224ENST00000584672 GPBP1L1Q9HC44 474 aaPredicted RBP20.32■□□□□ 0.84
CSNK1D-224ENST00000584672 USP31Q70CQ4 1352 aa20.31■□□□□ 0.84
CSNK1D-224ENST00000584672 HSPA6P17066 643 aa20.29■□□□□ 0.84
CSNK1D-224ENST00000584672 COL23A1Q86Y22 540 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms