RNA–Protein interactions for RNA: ENST00000584645.1

LIMD2-212, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-212ENST00000584645 EP400Q96L91 3159 aa23.12■■□□□ 1.29
LIMD2-212ENST00000584645 OVOS2A0A0J9YW53 1432 aa23.11■■□□□ 1.29
LIMD2-212ENST00000584645 OVOS2Q6IE36 1432 aa23.11■■□□□ 1.29
LIMD2-212ENST00000584645 ZBTB7CA1YPR0 619 aa23.11■■□□□ 1.29
LIMD2-212ENST00000584645 PARP4Q9UKK3 1724 aaKnown RBP23.11■■□□□ 1.29
LIMD2-212ENST00000584645 RGPD5Q99666 1765 aa23.09■■□□□ 1.29
LIMD2-212ENST00000584645 RGPD1P0DJD0 1748 aa23.09■■□□□ 1.29
LIMD2-212ENST00000584645 USP35Q9P2H5 1018 aa23.09■■□□□ 1.29
LIMD2-212ENST00000584645 LTN1O94822 1766 aa23.09■■□□□ 1.29
LIMD2-212ENST00000584645 WDR17Q8IZU2 1322 aa23.08■■□□□ 1.29
LIMD2-212ENST00000584645 WNK3Q9BYP7 1800 aa23.08■■□□□ 1.29
LIMD2-212ENST00000584645 SF3B2Q13435 895 aaKnown RBP23.08■■□□□ 1.29
LIMD2-212ENST00000584645 SOX12O15370 315 aa23.07■■□□□ 1.28
LIMD2-212ENST00000584645 ZRANB1Q9UGI0 708 aa23.07■■□□□ 1.28
LIMD2-212ENST00000584645 MYOM1P52179 1685 aa23.06■■□□□ 1.28
LIMD2-212ENST00000584645 AXIN2Q9Y2T1 843 aa23.06■■□□□ 1.28
LIMD2-212ENST00000584645 TOM1L2Q6ZVM7 507 aa23.04■■□□□ 1.28
LIMD2-212ENST00000584645 LRRC37A3O60309 1634 aa23.02■■□□□ 1.28
LIMD2-212ENST00000584645 PDE3BQ13370 1112 aa23.02■■□□□ 1.28
LIMD2-212ENST00000584645 FAM196AQ6ZSG2 479 aa23.02■■□□□ 1.28
LIMD2-212ENST00000584645 TNS1Q9HBL0 1735 aaKnown RBP23.02■■□□□ 1.28
LIMD2-212ENST00000584645 COG3Q96JB2 828 aa23.01■■□□□ 1.27
LIMD2-212ENST00000584645 CDCA7Q9BWT1 371 aaPredicted RBP23.01■■□□□ 1.27
LIMD2-212ENST00000584645 CARD10Q9BWT7 1032 aa23.01■■□□□ 1.27
LIMD2-212ENST00000584645 KIF20BQ96Q89 1820 aa23.01■■□□□ 1.27
LIMD2-212ENST00000584645 CCDC7Q96M83 1385 aa23.01■■□□□ 1.27
LIMD2-212ENST00000584645 C11orf95C9JLR9 678 aaPredicted RBP23■■□□□ 1.27
LIMD2-212ENST00000584645 CSB-PGBD3P0DP91 1061 aa23■■□□□ 1.27
LIMD2-212ENST00000584645 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.27
LIMD2-212ENST00000584645 DISP2A7MBM2 1401 aa22.99■■□□□ 1.27
LIMD2-212ENST00000584645 BAG6P46379 1132 aa22.99■■□□□ 1.27
LIMD2-212ENST00000584645 ERBB3P21860 1342 aa22.99■■□□□ 1.27
LIMD2-212ENST00000584645 FAM208AQ9UK61 1670 aaKnown RBP22.98■■□□□ 1.27
LIMD2-212ENST00000584645 FAM182BQ5T319 152 aa22.97■■□□□ 1.27
LIMD2-212ENST00000584645 DEFB132Q7Z7B7 95 aa22.96■■□□□ 1.27
LIMD2-212ENST00000584645 PEAK1Q9H792 1746 aa22.95■■□□□ 1.26
LIMD2-212ENST00000584645 OVOS2A0A0G2JMS6 1433 aa22.94■■□□□ 1.26
LIMD2-212ENST00000584645 FYB1O15117 783 aa22.94■■□□□ 1.26
LIMD2-212ENST00000584645 HSPA5P11021 654 aaKnown RBP22.94■■□□□ 1.26
LIMD2-212ENST00000584645 DDB1Q16531 1140 aa22.94■■□□□ 1.26
LIMD2-212ENST00000584645 IP6K1Q92551 441 aa22.94■■□□□ 1.26
LIMD2-212ENST00000584645 RTL1A6NKG5 1358 aa22.93■■□□□ 1.26
LIMD2-212ENST00000584645 NSD3Q9BZ95 1437 aa22.92■■□□□ 1.26
LIMD2-212ENST00000584645 ANKRD24Q8TF21 1146 aa22.92■■□□□ 1.26
LIMD2-212ENST00000584645 BCL9O00512 1426 aa22.91■■□□□ 1.26
LIMD2-212ENST00000584645 MAP3K19Q56UN5 1328 aa22.9■■□□□ 1.26
LIMD2-212ENST00000584645 GGNBP2Q9H3C7 697 aa22.9■■□□□ 1.26
LIMD2-212ENST00000584645 PARD3Q8TEW0 1356 aa22.89■■□□□ 1.26
LIMD2-212ENST00000584645 TRIM37O94972 964 aa22.89■■□□□ 1.25
LIMD2-212ENST00000584645 CARD14Q9BXL6 1004 aa22.89■■□□□ 1.25
LIMD2-212ENST00000584645 NLRP2Q9NX02 1062 aa22.89■■□□□ 1.25
LIMD2-212ENST00000584645 TNS2Q63HR2 1409 aa22.89■■□□□ 1.25
LIMD2-212ENST00000584645 SBF2Q86WG5 1849 aa22.89■■□□□ 1.25
LIMD2-212ENST00000584645 KIF24Q5T7B8 1368 aa22.88■■□□□ 1.25
LIMD2-212ENST00000584645 HOXC9P31274 260 aa22.87■■□□□ 1.25
LIMD2-212ENST00000584645 AMPHP49418 695 aa22.87■■□□□ 1.25
LIMD2-212ENST00000584645 RGPD3A6NKT7 1758 aaPredicted RBP22.86■■□□□ 1.25
LIMD2-212ENST00000584645 RGPD4Q7Z3J3 1758 aa22.86■■□□□ 1.25
LIMD2-212ENST00000584645 CGNL1Q0VF96 1302 aa22.85■■□□□ 1.25
LIMD2-212ENST00000584645 EXOC5O00471 708 aa22.85■■□□□ 1.25
LIMD2-212ENST00000584645 EN1Q05925 392 aaPredicted RBP22.85■■□□□ 1.25
LIMD2-212ENST00000584645 ANKRD26Q9UPS8 1709 aa22.85■■□□□ 1.25
LIMD2-212ENST00000584645 IL2RBP14784 551 aa22.84■■□□□ 1.25
LIMD2-212ENST00000584645 RREB1Q92766 1687 aa22.84■■□□□ 1.25
LIMD2-212ENST00000584645 APBA3O96018 575 aa22.83■■□□□ 1.25
LIMD2-212ENST00000584645 MARCH10Q8NA82 808 aaPredicted RBP22.83■■□□□ 1.25
LIMD2-212ENST00000584645 CAMKK2Q96RR4 588 aa22.82■■□□□ 1.24
LIMD2-212ENST00000584645 POLR3GLQ9BT43 218 aa22.82■■□□□ 1.24
LIMD2-212ENST00000584645 SMG6Q86US8 1419 aaKnown RBP22.82■■□□□ 1.24
LIMD2-212ENST00000584645 FLT4P35916 1363 aa22.81■■□□□ 1.24
LIMD2-212ENST00000584645 RRS1Q15050 365 aaKnown RBP22.81■■□□□ 1.24
LIMD2-212ENST00000584645 FBLN1P23142 703 aa22.8■■□□□ 1.24
LIMD2-212ENST00000584645 INSRP06213 1382 aa22.79■■□□□ 1.24
LIMD2-212ENST00000584645 RGPD2P0DJD1 1756 aa22.79■■□□□ 1.24
LIMD2-212ENST00000584645 EZH2Q15910 746 aaKnown RBP22.79■■□□□ 1.24
LIMD2-212ENST00000584645 LTV1Q96GA3 475 aaPredicted RBP22.79■■□□□ 1.24
LIMD2-212ENST00000584645 NUP188Q5SRE5 1749 aa22.78■■□□□ 1.24
LIMD2-212ENST00000584645 BCL11BQ9C0K0 894 aaPredicted RBP22.78■■□□□ 1.24
LIMD2-212ENST00000584645 NHSQ6T4R5 1651 aa22.77■■□□□ 1.24
LIMD2-212ENST00000584645 NSD2O96028 1365 aa22.76■■□□□ 1.23
LIMD2-212ENST00000584645 PLSCR1O15162 318 aa22.75■■□□□ 1.23
LIMD2-212ENST00000584645 PANK3Q9H999 370 aa22.75■■□□□ 1.23
LIMD2-212ENST00000584645 MAP2P11137 1827 aaKnown RBP22.75■■□□□ 1.23
LIMD2-212ENST00000584645 HSP90AB2PQ58FF8 381 aa22.72■■□□□ 1.23
LIMD2-212ENST00000584645 LRP5O75197 1615 aa22.71■■□□□ 1.23
LIMD2-212ENST00000584645 SHANK3Q9BYB0 1731 aa22.71■■□□□ 1.23
LIMD2-212ENST00000584645 NBPF6Q5VWK0 638 aa22.7■■□□□ 1.22
LIMD2-212ENST00000584645 NBPF4Q96M43 638 aa22.7■■□□□ 1.22
LIMD2-212ENST00000584645 EMILIN1Q9Y6C2 1016 aa22.7■■□□□ 1.22
LIMD2-212ENST00000584645 KIF7Q2M1P5 1343 aa22.7■■□□□ 1.22
LIMD2-212ENST00000584645 MEGF6O75095 1541 aa22.7■■□□□ 1.22
LIMD2-212ENST00000584645 WASHC2AQ641Q2 1341 aa22.69■■□□□ 1.22
LIMD2-212ENST00000584645 NCAPD2Q15021 1401 aa22.68■■□□□ 1.22
LIMD2-212ENST00000584645 NBPF14Q5TI25 921 aa22.68■■□□□ 1.22
LIMD2-212ENST00000584645 PSDA5PKW4 1024 aaPredicted RBP22.67■■□□□ 1.22
LIMD2-212ENST00000584645 PTF1AQ7RTS3 328 aa22.66■■□□□ 1.22
LIMD2-212ENST00000584645 ZCRB1Q8TBF4 217 aaKnown RBP22.66■■□□□ 1.22
LIMD2-212ENST00000584645 RAPGEF4Q8WZA2 1011 aa22.66■■□□□ 1.22
LIMD2-212ENST00000584645 POLKQ9UBT6 870 aa22.66■■□□□ 1.22
LIMD2-212ENST00000584645 R3HDM1Q15032 1099 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms