RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 TXNRD1Q16881 649 aa14.93□□□□□ -0.02
GGA3-219ENST00000584550 IFFO2Q5TF58 517 aa14.93□□□□□ -0.02
GGA3-219ENST00000584550 CHD4Q14839 1912 aa14.93□□□□□ -0.02
GGA3-219ENST00000584550 SLC15A2Q16348 729 aa14.92□□□□□ -0.02
GGA3-219ENST00000584550 TOPAZ1Q8N9V7 1692 aa14.92□□□□□ -0.02
GGA3-219ENST00000584550 MTFR1LQ9H019 292 aa14.9□□□□□ -0.02
GGA3-219ENST00000584550 NLRP6P59044 892 aa14.89□□□□□ -0.03
GGA3-219ENST00000584550 SRPK2P78362 688 aaKnown RBP14.89□□□□□ -0.03
GGA3-219ENST00000584550 AXIN2Q9Y2T1 843 aa14.89□□□□□ -0.03
GGA3-219ENST00000584550 AKAP12Q02952 1782 aa14.88□□□□□ -0.03
GGA3-219ENST00000584550 GPR162Q16538 588 aa14.88□□□□□ -0.03
GGA3-219ENST00000584550 ARXQ96QS3 562 aa14.88□□□□□ -0.03
GGA3-219ENST00000584550 SGIP1Q9BQI5 828 aa14.88□□□□□ -0.03
GGA3-219ENST00000584550 CABP2Q9NPB3 220 aa14.88□□□□□ -0.03
GGA3-219ENST00000584550 GOLGB1Q14789 3259 aaKnown RBP14.88□□□□□ -0.03
GGA3-219ENST00000584550 PPIP5K1Q6PFW1 1433 aa14.88□□□□□ -0.03
GGA3-219ENST00000584550 AATKQ6ZMQ8 1374 aa14.86□□□□□ -0.03
GGA3-219ENST00000584550 CEP350Q5VT06 3117 aa14.86□□□□□ -0.03
GGA3-219ENST00000584550 SOX12O15370 315 aa14.86□□□□□ -0.03
GGA3-219ENST00000584550 CSB-PGBD3P0DP91 1061 aa14.86□□□□□ -0.03
GGA3-219ENST00000584550 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
GGA3-219ENST00000584550 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
GGA3-219ENST00000584550 WNK3Q9BYP7 1800 aa14.85□□□□□ -0.03
GGA3-219ENST00000584550 GIGYF1O75420 1035 aaPredicted RBP14.85□□□□□ -0.03
GGA3-219ENST00000584550 ACSBG1Q96GR2 724 aa14.85□□□□□ -0.03
GGA3-219ENST00000584550 WDR17Q8IZU2 1322 aa14.85□□□□□ -0.03
GGA3-219ENST00000584550 RGPD5Q99666 1765 aa14.84□□□□□ -0.03
GGA3-219ENST00000584550 EXOC5O00471 708 aa14.84□□□□□ -0.03
GGA3-219ENST00000584550 CDCA7Q9BWT1 371 aaPredicted RBP14.84□□□□□ -0.03
GGA3-219ENST00000584550 CABP1Q9NZU7 370 aa14.84□□□□□ -0.03
GGA3-219ENST00000584550 COL18A1P39060 1754 aa14.83□□□□□ -0.03
GGA3-219ENST00000584550 RAB3GAP2Q9H2M9 1393 aa14.83□□□□□ -0.04
GGA3-219ENST00000584550 NBPF1Q3BBV0 1214 aa14.82□□□□□ -0.04
GGA3-219ENST00000584550 STAC3Q96MF2 364 aa14.82□□□□□ -0.04
GGA3-219ENST00000584550 BCL9O00512 1426 aa14.82□□□□□ -0.04
GGA3-219ENST00000584550 CARD10Q9BWT7 1032 aa14.81□□□□□ -0.04
GGA3-219ENST00000584550 SLIT3O75094 1523 aa14.81□□□□□ -0.04
GGA3-219ENST00000584550 ZNF827Q17R98 1081 aa14.8□□□□□ -0.04
GGA3-219ENST00000584550 USP6P35125 1406 aa14.8□□□□□ -0.04
GGA3-219ENST00000584550 ARHGEF25Q86VW2 580 aa14.79□□□□□ -0.04
GGA3-219ENST00000584550 PIK3C2AO00443 1686 aa14.78□□□□□ -0.04
GGA3-219ENST00000584550 CPSF1Q10570 1443 aaKnown RBP14.78□□□□□ -0.04
GGA3-219ENST00000584550 MAP3K5Q99683 1374 aa14.77□□□□□ -0.04
GGA3-219ENST00000584550 CENPJQ9HC77 1338 aaPredicted RBP14.77□□□□□ -0.04
GGA3-219ENST00000584550 LRRC4BQ9NT99 713 aa14.77□□□□□ -0.05
GGA3-219ENST00000584550 KAT6BQ8WYB5 2073 aa14.77□□□□□ -0.05
GGA3-219ENST00000584550 BRD4O60885 1362 aaPredicted RBP14.76□□□□□ -0.05
GGA3-219ENST00000584550 NLGN2Q8NFZ4 835 aa14.76□□□□□ -0.05
GGA3-219ENST00000584550 NHSQ6T4R5 1651 aa14.76□□□□□ -0.05
GGA3-219ENST00000584550 PAPPAQ13219 1627 aa14.75□□□□□ -0.05
GGA3-219ENST00000584550 POLD1P28340 1107 aa14.75□□□□□ -0.05
GGA3-219ENST00000584550 KCNH5Q8NCM2 988 aa14.75□□□□□ -0.05
GGA3-219ENST00000584550 TNS2Q63HR2 1409 aa14.75□□□□□ -0.05
GGA3-219ENST00000584550 BTAF1O14981 1849 aa14.74□□□□□ -0.05
GGA3-219ENST00000584550 SHANK3Q9BYB0 1731 aa14.74□□□□□ -0.05
GGA3-219ENST00000584550 CCDC7Q96M83 1385 aa14.73□□□□□ -0.05
GGA3-219ENST00000584550 TTC21BQ7Z4L5 1316 aa14.73□□□□□ -0.05
GGA3-219ENST00000584550 KCNQ4P56696 695 aa14.73□□□□□ -0.05
GGA3-219ENST00000584550 NLRP2Q9NX02 1062 aa14.73□□□□□ -0.05
GGA3-219ENST00000584550 QRICH2Q9H0J4 1663 aa14.73□□□□□ -0.05
GGA3-219ENST00000584550 KIAA1210Q9ULL0 1709 aa14.72□□□□□ -0.05
GGA3-219ENST00000584550 AKT1S1Q96B36 256 aa14.72□□□□□ -0.05
GGA3-219ENST00000584550 TRPM1Q7Z4N2 1603 aa14.71□□□□□ -0.05
GGA3-219ENST00000584550 YBX3P16989 372 aaKnown RBP eCLIP14.71□□□□□ -0.05
GGA3-219ENST00000584550 TFCP2L1Q9NZI6 479 aa14.71□□□□□ -0.05
GGA3-219ENST00000584550 PNPLA7Q6ZV29 1317 aa14.7□□□□□ -0.06
GGA3-219ENST00000584550 IL2RBP14784 551 aa14.7□□□□□ -0.06
GGA3-219ENST00000584550 SLC16A10Q8TF71 515 aa14.7□□□□□ -0.06
GGA3-219ENST00000584550 ABCC6O95255 1503 aa14.69□□□□□ -0.06
GGA3-219ENST00000584550 NFAT5O94916 1531 aa14.68□□□□□ -0.06
GGA3-219ENST00000584550 MSH5O43196 834 aa14.68□□□□□ -0.06
GGA3-219ENST00000584550 DDX54Q8TDD1 881 aaKnown RBP14.68□□□□□ -0.06
GGA3-219ENST00000584550 ZNF526Q8TF50 670 aaPredicted RBP14.68□□□□□ -0.06
GGA3-219ENST00000584550 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
GGA3-219ENST00000584550 EVC2Q86UK5 1308 aa14.67□□□□□ -0.06
GGA3-219ENST00000584550 GRIN3BO60391 1043 aa14.67□□□□□ -0.06
GGA3-219ENST00000584550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.67□□□□□ -0.06
GGA3-219ENST00000584550 SYTL4Q96C24 671 aaPredicted RBP14.67□□□□□ -0.06
GGA3-219ENST00000584550 ATP10DQ9P241 1426 aa14.66□□□□□ -0.06
GGA3-219ENST00000584550 TUBGCP6Q96RT7 1819 aa14.66□□□□□ -0.06
GGA3-219ENST00000584550 SLC27A3Q5K4L6 730 aa14.66□□□□□ -0.06
GGA3-219ENST00000584550 ERBB3P21860 1342 aa14.66□□□□□ -0.06
GGA3-219ENST00000584550 TTC21AQ8NDW8 1320 aa14.66□□□□□ -0.06
GGA3-219ENST00000584550 KTN1Q86UP2 1357 aaKnown RBP14.65□□□□□ -0.06
GGA3-219ENST00000584550 TRIM26Q12899 539 aaPredicted RBP14.65□□□□□ -0.06
GGA3-219ENST00000584550 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
GGA3-219ENST00000584550 GPBP1L1Q9HC44 474 aaPredicted RBP14.65□□□□□ -0.06
GGA3-219ENST00000584550 COL24A1Q17RW2 1714 aa14.65□□□□□ -0.06
GGA3-219ENST00000584550 QSER1Q2KHR3 1735 aa14.65□□□□□ -0.06
GGA3-219ENST00000584550 MSL1Q68DK7 614 aa14.64□□□□□ -0.07
GGA3-219ENST00000584550 LTN1O94822 1766 aa14.63□□□□□ -0.07
GGA3-219ENST00000584550 HSPA6P17066 643 aa14.63□□□□□ -0.07
GGA3-219ENST00000584550 PRIM1P49642 420 aaKnown RBP14.63□□□□□ -0.07
GGA3-219ENST00000584550 NME9Q86XW9 330 aa14.62□□□□□ -0.07
GGA3-219ENST00000584550 LTV1Q96GA3 475 aaPredicted RBP14.62□□□□□ -0.07
GGA3-219ENST00000584550 COL23A1Q86Y22 540 aaPredicted RBP14.61□□□□□ -0.07
GGA3-219ENST00000584550 WWC3Q9ULE0 1092 aa14.61□□□□□ -0.07
GGA3-219ENST00000584550 CCNL1Q9UK58 526 aaPredicted RBP14.6□□□□□ -0.07
GGA3-219ENST00000584550 LY75O60449 1722 aa14.57□□□□□ -0.08
GGA3-219ENST00000584550 MON2Q7Z3U7 1717 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms