RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 BARGINQ6ZT62 677 aa37.67■■■■□ 3.62
SMARCD2-210ENST00000584400 TCP11L2Q8N4U5 519 aa37.67■■■■□ 3.62
SMARCD2-210ENST00000584400 POLR3GLQ9BT43 218 aa37.67■■■■□ 3.62
SMARCD2-210ENST00000584400 CCDC125Q86Z20 511 aa37.65■■■■□ 3.62
SMARCD2-210ENST00000584400 CRB1P82279 1406 aa37.64■■■■□ 3.62
SMARCD2-210ENST00000584400 AXIN2Q9Y2T1 843 aa37.64■■■■□ 3.62
SMARCD2-210ENST00000584400 ABCC6O95255 1503 aa37.63■■■■□ 3.61
SMARCD2-210ENST00000584400 TOM1L2Q6ZVM7 507 aa37.63■■■■□ 3.61
SMARCD2-210ENST00000584400 WDR17Q8IZU2 1322 aa37.61■■■■□ 3.61
SMARCD2-210ENST00000584400 CSB-PGBD3P0DP91 1061 aa37.6■■■■□ 3.61
SMARCD2-210ENST00000584400 FYB1O15117 783 aa37.59■■■■□ 3.61
SMARCD2-210ENST00000584400 COL18A1P39060 1754 aa37.58■■■■□ 3.61
SMARCD2-210ENST00000584400 THSD7AQ9UPZ6 1657 aa37.56■■■■□ 3.6
SMARCD2-210ENST00000584400 GGNBP2Q9H3C7 697 aa37.55■■■■□ 3.6
SMARCD2-210ENST00000584400 MYOM1P52179 1685 aa37.54■■■■□ 3.6
SMARCD2-210ENST00000584400 CARD14Q9BXL6 1004 aa37.54■■■■□ 3.6
SMARCD2-210ENST00000584400 NSD3Q9BZ95 1437 aa37.53■■■■□ 3.6
SMARCD2-210ENST00000584400 BRWD3Q6RI45 1802 aa37.52■■■■□ 3.6
SMARCD2-210ENST00000584400 PDE3BQ13370 1112 aa37.51■■■■□ 3.6
SMARCD2-210ENST00000584400 CARD10Q9BWT7 1032 aa37.51■■■■□ 3.6
SMARCD2-210ENST00000584400 SF3B2Q13435 895 aaKnown RBP37.5■■■■□ 3.59
SMARCD2-210ENST00000584400 CDCA7Q9BWT1 371 aaPredicted RBP37.5■■■■□ 3.59
SMARCD2-210ENST00000584400 BLMP54132 1417 aaPredicted RBP37.5■■■■□ 3.59
SMARCD2-210ENST00000584400 IP6K1Q92551 441 aa37.49■■■■□ 3.59
SMARCD2-210ENST00000584400 CGNL1Q0VF96 1302 aa37.49■■■■□ 3.59
SMARCD2-210ENST00000584400 ERBB3P21860 1342 aa37.47■■■■□ 3.59
SMARCD2-210ENST00000584400 CCDC7Q96M83 1385 aa37.46■■■■□ 3.59
SMARCD2-210ENST00000584400 AMPHP49418 695 aa37.46■■■■□ 3.59
SMARCD2-210ENST00000584400 MAP3K19Q56UN5 1328 aa37.44■■■■□ 3.58
SMARCD2-210ENST00000584400 ANKRD24Q8TF21 1146 aa37.44■■■■□ 3.58
SMARCD2-210ENST00000584400 LTN1O94822 1766 aa37.43■■■■□ 3.58
SMARCD2-210ENST00000584400 FAM196AQ6ZSG2 479 aa37.43■■■■□ 3.58
SMARCD2-210ENST00000584400 C11orf95C9JLR9 678 aaPredicted RBP37.42■■■■□ 3.58
SMARCD2-210ENST00000584400 PANK3Q9H999 370 aa37.41■■■■□ 3.58
SMARCD2-210ENST00000584400 NLRP2Q9NX02 1062 aa37.41■■■■□ 3.58
SMARCD2-210ENST00000584400 DDB1Q16531 1140 aa37.4■■■■□ 3.58
SMARCD2-210ENST00000584400 RTL1A6NKG5 1358 aa37.4■■■■□ 3.58
SMARCD2-210ENST00000584400 HOXC9P31274 260 aa37.39■■■■□ 3.58
SMARCD2-210ENST00000584400 KIF20BQ96Q89 1820 aa37.38■■■■□ 3.58
SMARCD2-210ENST00000584400 FAM182BQ5T319 152 aa37.38■■■■□ 3.57
SMARCD2-210ENST00000584400 RGPD5Q99666 1765 aa37.37■■■■□ 3.57
SMARCD2-210ENST00000584400 FBLN1P23142 703 aa37.36■■■■□ 3.57
SMARCD2-210ENST00000584400 RRS1Q15050 365 aaKnown RBP37.36■■■■□ 3.57
SMARCD2-210ENST00000584400 KIF24Q5T7B8 1368 aa37.35■■■■□ 3.57
SMARCD2-210ENST00000584400 KIF7Q2M1P5 1343 aa37.35■■■■□ 3.57
SMARCD2-210ENST00000584400 PARP4Q9UKK3 1724 aaKnown RBP37.34■■■■□ 3.57
SMARCD2-210ENST00000584400 LTV1Q96GA3 475 aaPredicted RBP37.33■■■■□ 3.57
SMARCD2-210ENST00000584400 BAG6P46379 1132 aa37.31■■■■□ 3.56
SMARCD2-210ENST00000584400 EXOC5O00471 708 aa37.3■■■■□ 3.56
SMARCD2-210ENST00000584400 DISP2A7MBM2 1401 aa37.29■■■■□ 3.56
SMARCD2-210ENST00000584400 KNSTRNQ9Y448 316 aa37.29■■■■□ 3.56
SMARCD2-210ENST00000584400 EP400Q96L91 3159 aa37.29■■■■□ 3.56
SMARCD2-210ENST00000584400 NSD2O96028 1365 aa37.29■■■■□ 3.56
SMARCD2-210ENST00000584400 IL2RBP14784 551 aa37.28■■■■□ 3.56
SMARCD2-210ENST00000584400 FLT4P35916 1363 aa37.28■■■■□ 3.56
SMARCD2-210ENST00000584400 SMG6Q86US8 1419 aaKnown RBP37.27■■■■□ 3.56
SMARCD2-210ENST00000584400 OVOS2A0A0G2JMS6 1433 aa37.26■■■■□ 3.55
SMARCD2-210ENST00000584400 DEFB132Q7Z7B7 95 aa37.24■■■■□ 3.55
SMARCD2-210ENST00000584400 LRRC37A3O60309 1634 aa37.24■■■■□ 3.55
SMARCD2-210ENST00000584400 TRIM37O94972 964 aa37.23■■■■□ 3.55
SMARCD2-210ENST00000584400 INSRP06213 1382 aa37.23■■■■□ 3.55
SMARCD2-210ENST00000584400 FAM208AQ9UK61 1670 aaKnown RBP37.22■■■■□ 3.55
SMARCD2-210ENST00000584400 WNK3Q9BYP7 1800 aa37.2■■■■□ 3.55
SMARCD2-210ENST00000584400 RGPD1P0DJD0 1748 aa37.2■■■■□ 3.55
SMARCD2-210ENST00000584400 PPM1GO15355 546 aaPredicted RBP37.19■■■■□ 3.54
SMARCD2-210ENST00000584400 HSP90AB2PQ58FF8 381 aa37.19■■■■□ 3.54
SMARCD2-210ENST00000584400 EMILIN1Q9Y6C2 1016 aa37.19■■■■□ 3.54
SMARCD2-210ENST00000584400 TNS2Q63HR2 1409 aa37.19■■■■□ 3.54
SMARCD2-210ENST00000584400 MARCH10Q8NA82 808 aaPredicted RBP37.16■■■■□ 3.54
SMARCD2-210ENST00000584400 MORC1Q86VD1 984 aa37.15■■■■□ 3.54
SMARCD2-210ENST00000584400 BCL9O00512 1426 aa37.14■■■■□ 3.54
SMARCD2-210ENST00000584400 TNNT2P45379 298 aaPredicted RBP37.14■■■■□ 3.54
SMARCD2-210ENST00000584400 POLKQ9UBT6 870 aa37.14■■■■□ 3.54
SMARCD2-210ENST00000584400 WASHC2AQ641Q2 1341 aa37.13■■■■□ 3.54
SMARCD2-210ENST00000584400 APBA3O96018 575 aa37.13■■■■□ 3.53
SMARCD2-210ENST00000584400 EN1Q05925 392 aaPredicted RBP37.12■■■■□ 3.53
SMARCD2-210ENST00000584400 NBPF6Q5VWK0 638 aa37.12■■■■□ 3.53
SMARCD2-210ENST00000584400 NBPF4Q96M43 638 aa37.12■■■■□ 3.53
SMARCD2-210ENST00000584400 ANKRD26Q9UPS8 1709 aa37.11■■■■□ 3.53
SMARCD2-210ENST00000584400 PEAK1Q9H792 1746 aa37.09■■■■□ 3.53
SMARCD2-210ENST00000584400 PARD3Q8TEW0 1356 aa37.07■■■■□ 3.53
SMARCD2-210ENST00000584400 AMER1Q5JTC6 1135 aaPredicted RBP37.07■■■■□ 3.52
SMARCD2-210ENST00000584400 RAPGEF4Q8WZA2 1011 aa37.07■■■■□ 3.52
SMARCD2-210ENST00000584400 BCL11BQ9C0K0 894 aaPredicted RBP37.06■■■■□ 3.52
SMARCD2-210ENST00000584400 TNS1Q9HBL0 1735 aaKnown RBP37.05■■■■□ 3.52
SMARCD2-210ENST00000584400 PER1O15534 1290 aaPredicted RBP37.05■■■■□ 3.52
SMARCD2-210ENST00000584400 USHBP1Q8N6Y0 703 aa37.02■■■■□ 3.52
SMARCD2-210ENST00000584400 CAMKK2Q96RR4 588 aa37.02■■■■□ 3.52
SMARCD2-210ENST00000584400 TATP17735 454 aaPredicted RBP37.01■■■■□ 3.52
SMARCD2-210ENST00000584400 EZH2Q15910 746 aaKnown RBP37.01■■■■□ 3.52
SMARCD2-210ENST00000584400 ZCRB1Q8TBF4 217 aaKnown RBP37.01■■■■□ 3.52
SMARCD2-210ENST00000584400 DDX54Q8TDD1 881 aaKnown RBP37■■■■□ 3.51
SMARCD2-210ENST00000584400 MAP2P11137 1827 aaKnown RBP36.98■■■■□ 3.51
SMARCD2-210ENST00000584400 MEGF6O75095 1541 aa36.96■■■■□ 3.51
SMARCD2-210ENST00000584400 PLSCR1O15162 318 aa36.96■■■■□ 3.51
SMARCD2-210ENST00000584400 NPC1L1Q9UHC9 1359 aa36.94■■■■□ 3.5
SMARCD2-210ENST00000584400 EIF4A2Q14240 407 aaKnown RBP36.93■■■■□ 3.5
SMARCD2-210ENST00000584400 CC2D1BQ5T0F9 858 aaKnown RBP36.93■■■■□ 3.5
SMARCD2-210ENST00000584400 EYA1Q99502 592 aa36.93■■■■□ 3.5
SMARCD2-210ENST00000584400 RGPD2P0DJD1 1756 aa36.93■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms