RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 SPATA31A1Q5TZJ5 1347 aa34.57■■■■□ 3.13
TTC39C-209ENST00000584250 UPF1Q92900 1129 aaKnown RBP eCLIP34.56■■■■□ 3.12
TTC39C-209ENST00000584250 USP35Q9P2H5 1018 aa34.55■■■■□ 3.12
TTC39C-209ENST00000584250 FYB1O15117 783 aa34.54■■■■□ 3.12
TTC39C-209ENST00000584250 FBLN1P23142 703 aa34.54■■■■□ 3.12
TTC39C-209ENST00000584250 GGNBP2Q9H3C7 697 aa34.53■■■■□ 3.12
TTC39C-209ENST00000584250 NSD3Q9BZ95 1437 aa34.52■■■■□ 3.12
TTC39C-209ENST00000584250 LTN1O94822 1766 aa34.51■■■■□ 3.11
TTC39C-209ENST00000584250 A0A0G2JS52 829 aa34.5■■■■□ 3.11
TTC39C-209ENST00000584250 MYT1Q01538 1121 aa34.5■■■■□ 3.11
TTC39C-209ENST00000584250 COG3Q96JB2 828 aa34.5■■■■□ 3.11
TTC39C-209ENST00000584250 THSD7AQ9UPZ6 1657 aa34.49■■■■□ 3.11
TTC39C-209ENST00000584250 KIF20BQ96Q89 1820 aa34.48■■■■□ 3.11
TTC39C-209ENST00000584250 CRB1P82279 1406 aa34.44■■■■□ 3.1
TTC39C-209ENST00000584250 KIF7Q2M1P5 1343 aa34.43■■■■□ 3.1
TTC39C-209ENST00000584250 WDR17Q8IZU2 1322 aa34.42■■■■□ 3.1
TTC39C-209ENST00000584250 TCP11L2Q8N4U5 519 aa34.42■■■■□ 3.1
TTC39C-209ENST00000584250 KRT27Q7Z3Y8 459 aa34.41■■■■□ 3.1
TTC39C-209ENST00000584250 PANK3Q9H999 370 aa34.41■■■■□ 3.1
TTC39C-209ENST00000584250 FAM182BQ5T319 152 aa34.4■■■■□ 3.1
TTC39C-209ENST00000584250 TOM1L2Q6ZVM7 507 aa34.4■■■■□ 3.1
TTC39C-209ENST00000584250 ABCC6O95255 1503 aa34.4■■■■□ 3.1
TTC39C-209ENST00000584250 MAP3K19Q56UN5 1328 aa34.39■■■■□ 3.1
TTC39C-209ENST00000584250 BARGINQ6ZT62 677 aa34.39■■■■□ 3.1
TTC39C-209ENST00000584250 EP400Q96L91 3159 aa34.38■■■■□ 3.09
TTC39C-209ENST00000584250 RRS1Q15050 365 aaKnown RBP34.37■■■■□ 3.09
TTC39C-209ENST00000584250 CSB-PGBD3P0DP91 1061 aa34.36■■■■□ 3.09
TTC39C-209ENST00000584250 ERBB3P21860 1342 aa34.33■■■■□ 3.09
TTC39C-209ENST00000584250 IP6K1Q92551 441 aa34.33■■■■□ 3.09
TTC39C-209ENST00000584250 THRAP3Q9Y2W1 955 aaKnown RBP34.33■■■■□ 3.09
TTC39C-209ENST00000584250 ANKRD24Q8TF21 1146 aa34.32■■■■□ 3.08
TTC39C-209ENST00000584250 CGNL1Q0VF96 1302 aa34.31■■■■□ 3.08
TTC39C-209ENST00000584250 HOXC9P31274 260 aa34.3■■■■□ 3.08
TTC39C-209ENST00000584250 CARD10Q9BWT7 1032 aa34.3■■■■□ 3.08
TTC39C-209ENST00000584250 LTV1Q96GA3 475 aaPredicted RBP34.29■■■■□ 3.08
TTC39C-209ENST00000584250 WNK3Q9BYP7 1800 aa34.28■■■■□ 3.08
TTC39C-209ENST00000584250 PEAK1Q9H792 1746 aa34.28■■■■□ 3.08
TTC39C-209ENST00000584250 AMPHP49418 695 aa34.28■■■■□ 3.08
TTC39C-209ENST00000584250 BLMP54132 1417 aaPredicted RBP34.27■■■■□ 3.08
TTC39C-209ENST00000584250 WASHC2AQ641Q2 1341 aa34.27■■■■□ 3.08
TTC39C-209ENST00000584250 PARP4Q9UKK3 1724 aaKnown RBP34.27■■■■□ 3.08
TTC39C-209ENST00000584250 CCDC7Q96M83 1385 aa34.26■■■■□ 3.08
TTC39C-209ENST00000584250 NLRP2Q9NX02 1062 aa34.26■■■■□ 3.08
TTC39C-209ENST00000584250 EMILIN1Q9Y6C2 1016 aa34.24■■■■□ 3.07
TTC39C-209ENST00000584250 LRRC37A3O60309 1634 aa34.23■■■■□ 3.07
TTC39C-209ENST00000584250 DISP2A7MBM2 1401 aa34.23■■■■□ 3.07
TTC39C-209ENST00000584250 ANKRD26Q9UPS8 1709 aa34.23■■■■□ 3.07
TTC39C-209ENST00000584250 RGPD2P0DJD1 1756 aa34.21■■■■□ 3.07
TTC39C-209ENST00000584250 PDE3BQ13370 1112 aa34.2■■■■□ 3.07
TTC39C-209ENST00000584250 RTL1A6NKG5 1358 aa34.2■■■■□ 3.07
TTC39C-209ENST00000584250 TNNT2P45379 298 aaPredicted RBP34.19■■■■□ 3.06
TTC39C-209ENST00000584250 HSP90AB2PQ58FF8 381 aa34.19■■■■□ 3.06
TTC39C-209ENST00000584250 MAP2P11137 1827 aaKnown RBP34.17■■■■□ 3.06
TTC39C-209ENST00000584250 DDB1Q16531 1140 aa34.16■■■■□ 3.06
TTC39C-209ENST00000584250 KNSTRNQ9Y448 316 aa34.15■■■■□ 3.06
TTC39C-209ENST00000584250 DEFB132Q7Z7B7 95 aa34.14■■■■□ 3.06
TTC39C-209ENST00000584250 CCDC125Q86Z20 511 aa34.14■■■■□ 3.06
TTC39C-209ENST00000584250 FLT4P35916 1363 aa34.13■■■■□ 3.05
TTC39C-209ENST00000584250 FAM208AQ9UK61 1670 aaKnown RBP34.13■■■■□ 3.05
TTC39C-209ENST00000584250 PPM1GO15355 546 aaPredicted RBP34.13■■■■□ 3.05
TTC39C-209ENST00000584250 PER1O15534 1290 aaPredicted RBP34.13■■■■□ 3.05
TTC39C-209ENST00000584250 POLKQ9UBT6 870 aa34.13■■■■□ 3.05
TTC39C-209ENST00000584250 AMER1Q5JTC6 1135 aaPredicted RBP34.12■■■■□ 3.05
TTC39C-209ENST00000584250 INSRP06213 1382 aa34.11■■■■□ 3.05
TTC39C-209ENST00000584250 FAM196AQ6ZSG2 479 aa34.11■■■■□ 3.05
TTC39C-209ENST00000584250 MARCH10Q8NA82 808 aaPredicted RBP34.11■■■■□ 3.05
TTC39C-209ENST00000584250 CDCA7Q9BWT1 371 aaPredicted RBP34.11■■■■□ 3.05
TTC39C-209ENST00000584250 NBPF6Q5VWK0 638 aa34.1■■■■□ 3.05
TTC39C-209ENST00000584250 NBPF4Q96M43 638 aa34.1■■■■□ 3.05
TTC39C-209ENST00000584250 NSD2O96028 1365 aa34.1■■■■□ 3.05
TTC39C-209ENST00000584250 TRIM37O94972 964 aa34.09■■■■□ 3.05
TTC39C-209ENST00000584250 USHBP1Q8N6Y0 703 aa34.09■■■■□ 3.05
TTC39C-209ENST00000584250 IL2RBP14784 551 aa34.08■■■■□ 3.05
TTC39C-209ENST00000584250 KIF24Q5T7B8 1368 aa34.08■■■■□ 3.05
TTC39C-209ENST00000584250 TNS1Q9HBL0 1735 aaKnown RBP34.07■■■■□ 3.04
TTC39C-209ENST00000584250 MORC1Q86VD1 984 aa34.06■■■■□ 3.04
TTC39C-209ENST00000584250 TNS2Q63HR2 1409 aa34.05■■■■□ 3.04
TTC39C-209ENST00000584250 RGPD1P0DJD0 1748 aa34.05■■■■□ 3.04
TTC39C-209ENST00000584250 EXOC5O00471 708 aa34.05■■■■□ 3.04
TTC39C-209ENST00000584250 SF3B2Q13435 895 aaKnown RBP34.04■■■■□ 3.04
TTC39C-209ENST00000584250 OVOS2A0A0G2JMS6 1433 aa34.03■■■■□ 3.04
TTC39C-209ENST00000584250 MEGF6O75095 1541 aa34.01■■■■□ 3.04
TTC39C-209ENST00000584250 SMG6Q86US8 1419 aaKnown RBP34.01■■■■□ 3.03
TTC39C-209ENST00000584250 CC2D1BQ5T0F9 858 aaKnown RBP34■■■■□ 3.03
TTC39C-209ENST00000584250 PTF1AQ7RTS3 328 aa34■■■■□ 3.03
TTC39C-209ENST00000584250 SBF2Q86WG5 1849 aa34■■■■□ 3.03
TTC39C-209ENST00000584250 CNGB1Q14028 1251 aaPredicted RBP33.99■■■■□ 3.03
TTC39C-209ENST00000584250 EN1Q05925 392 aaPredicted RBP33.98■■■■□ 3.03
TTC39C-209ENST00000584250 BAG6P46379 1132 aa33.95■■■■□ 3.03
TTC39C-209ENST00000584250 EIF4A2Q14240 407 aaKnown RBP33.94■■■■□ 3.02
TTC39C-209ENST00000584250 EYA1Q99502 592 aa33.93■■■■□ 3.02
TTC39C-209ENST00000584250 SHANK3Q9BYB0 1731 aa33.93■■■■□ 3.02
TTC39C-209ENST00000584250 APBA3O96018 575 aa33.92■■■■□ 3.02
TTC39C-209ENST00000584250 BCL9O00512 1426 aa33.9■■■■□ 3.02
TTC39C-209ENST00000584250 DDX54Q8TDD1 881 aaKnown RBP33.9■■■■□ 3.02
TTC39C-209ENST00000584250 NCAPD2Q15021 1401 aa33.89■■■■□ 3.02
TTC39C-209ENST00000584250 EZH2Q15910 746 aaKnown RBP33.89■■■■□ 3.02
TTC39C-209ENST00000584250 NPC1L1Q9UHC9 1359 aa33.87■■■■□ 3.01
TTC39C-209ENST00000584250 KCNQ2O43526 872 aa33.87■■■■□ 3.01
TTC39C-209ENST00000584250 ZCRB1Q8TBF4 217 aaKnown RBP33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms