RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
TTC39C-208ENST00000584095 NOVA2Q9UNW9 492 aaKnown RBP10.19□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L15C9J2P7 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L10C9JJH3 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L13C9JLJ4 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L12C9JPN9 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L11C9JVI0 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L21D6R901 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L18D6R9N7 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L22D6RA61 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L17D6RBQ6 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L19D6RCP7 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L20D6RJB6 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 USP17L24Q0WX57 530 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 AGERQ15109 404 aa10.18□□□□□ -0.78
TTC39C-208ENST00000584095 CRTC2Q53ET0 693 aaPredicted RBP10.18□□□□□ -0.78
TTC39C-208ENST00000584095 CCDC9Q9Y3X0 531 aaKnown RBP10.18□□□□□ -0.78
TTC39C-208ENST00000584095 FAM196BA6NMK8 535 aa10.17□□□□□ -0.78
TTC39C-208ENST00000584095 PPEF1O14829 653 aaPredicted RBP10.17□□□□□ -0.78
TTC39C-208ENST00000584095 KCNA1Q09470 495 aa10.17□□□□□ -0.78
TTC39C-208ENST00000584095 MAP7D1Q3KQU3 841 aa10.17□□□□□ -0.78
TTC39C-208ENST00000584095 TMEM164Q5U3C3 297 aa10.17□□□□□ -0.78
TTC39C-208ENST00000584095 CCDC85AQ96PX6 553 aaPredicted RBP10.17□□□□□ -0.78
TTC39C-208ENST00000584095 C1QTNF2Q9BXJ5 285 aa10.17□□□□□ -0.78
TTC39C-208ENST00000584095 GIGYF1O75420 1035 aaPredicted RBP10.16□□□□□ -0.78
TTC39C-208ENST00000584095 SH3BP2P78314 561 aa10.16□□□□□ -0.78
TTC39C-208ENST00000584095 GZF1Q9H116 711 aaPredicted RBP10.16□□□□□ -0.78
TTC39C-208ENST00000584095 ATP5J2-PTCD1G3V325 749 aa10.15□□□□□ -0.78
TTC39C-208ENST00000584095 LZTS3O60299 673 aaPredicted RBP10.15□□□□□ -0.78
TTC39C-208ENST00000584095 PTK7Q13308 1070 aa10.15□□□□□ -0.78
TTC39C-208ENST00000584095 PATL2C9JE40 543 aaKnown RBP10.14□□□□□ -0.79
TTC39C-208ENST00000584095 ITGBL1O95965 494 aaPredicted RBP10.14□□□□□ -0.79
TTC39C-208ENST00000584095 RASA1P20936 1047 aa10.14□□□□□ -0.79
TTC39C-208ENST00000584095 KCNC4Q03721 635 aa10.14□□□□□ -0.79
TTC39C-208ENST00000584095 EML3Q32P44 896 aa10.14□□□□□ -0.79
TTC39C-208ENST00000584095 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
TTC39C-208ENST00000584095 SLC10A4Q96EP9 437 aa10.14□□□□□ -0.79
TTC39C-208ENST00000584095 DOLKQ9UPQ8 538 aa10.14□□□□□ -0.79
TTC39C-208ENST00000584095 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
TTC39C-208ENST00000584095 PLA2G2CQ5R387 149 aa10.13□□□□□ -0.79
TTC39C-208ENST00000584095 CLDN10P78369 228 aa10.12□□□□□ -0.79
TTC39C-208ENST00000584095 TRMT44Q8IYL2 757 aaKnown RBP10.12□□□□□ -0.79
TTC39C-208ENST00000584095 ESPNB1AK53 854 aa10.11□□□□□ -0.79
TTC39C-208ENST00000584095 TRIM32Q13049 653 aa10.11□□□□□ -0.79
TTC39C-208ENST00000584095 OXLD1Q5BKU9 147 aa10.11□□□□□ -0.79
TTC39C-208ENST00000584095 OGFOD1Q8N543 542 aa10.11□□□□□ -0.79
TTC39C-208ENST00000584095 HCSTQ9UBK5 93 aa10.11□□□□□ -0.79
TTC39C-208ENST00000584095 FAM69CQ0P6D2 419 aa10.1□□□□□ -0.79
TTC39C-208ENST00000584095 NBPF20Q3BBV1 942 aa10.1□□□□□ -0.79
TTC39C-208ENST00000584095 ANKMY2Q8IV38 441 aa10.1□□□□□ -0.79
TTC39C-208ENST00000584095 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
TTC39C-208ENST00000584095 CDCA7Q9BWT1 371 aaPredicted RBP10.1□□□□□ -0.79
TTC39C-208ENST00000584095 SLAIN2Q9P270 581 aa10.1□□□□□ -0.79
TTC39C-208ENST00000584095 NOD1Q9Y239 953 aa10.1□□□□□ -0.79
TTC39C-208ENST00000584095 SKOR1P84550 965 aa10.09□□□□□ -0.79
TTC39C-208ENST00000584095 TMCO4Q5TGY1 634 aa10.09□□□□□ -0.79
TTC39C-208ENST00000584095 RNF20Q5VTR2 975 aa10.09□□□□□ -0.79
TTC39C-208ENST00000584095 TRIM50Q86XT4 487 aa10.09□□□□□ -0.79
TTC39C-208ENST00000584095 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
TTC39C-208ENST00000584095 ZNF594Q96JF6 807 aaPredicted RBP10.09□□□□□ -0.79
TTC39C-208ENST00000584095 DNAAF2Q9NVR5 837 aaKnown RBP10.09□□□□□ -0.79
TTC39C-208ENST00000584095 KIAA1024Q9UPX6 916 aa10.09□□□□□ -0.79
TTC39C-208ENST00000584095 IVNS1ABPQ9Y6Y0 642 aa10.09□□□□□ -0.79
TTC39C-208ENST00000584095 ZBTB24O43167 697 aaPredicted RBP10.08□□□□□ -0.8
TTC39C-208ENST00000584095 DPYDQ12882 1025 aa10.08□□□□□ -0.8
TTC39C-208ENST00000584095 FAM200AQ8TCP9 573 aa10.08□□□□□ -0.8
TTC39C-208ENST00000584095 PCDH10Q9P2E7 1040 aa10.08□□□□□ -0.8
TTC39C-208ENST00000584095 DKK1O94907 266 aa10.07□□□□□ -0.8
TTC39C-208ENST00000584095 ATP1A2P50993 1020 aa10.07□□□□□ -0.8
TTC39C-208ENST00000584095 B4GALNT3Q6L9W6 998 aa10.07□□□□□ -0.8
TTC39C-208ENST00000584095 PHLDB3Q6NSJ2 640 aa10.07□□□□□ -0.8
TTC39C-208ENST00000584095 CDV3Q9UKY7 258 aaKnown RBP10.07□□□□□ -0.8
TTC39C-208ENST00000584095 PCDHB11Q9Y5F2 797 aa10.07□□□□□ -0.8
TTC39C-208ENST00000584095 ZBTB7BO15156 539 aaPredicted RBP10.06□□□□□ -0.8
TTC39C-208ENST00000584095 GGCXP38435 758 aa10.06□□□□□ -0.8
TTC39C-208ENST00000584095 GTF2IP78347 998 aa10.06□□□□□ -0.8
TTC39C-208ENST00000584095 SEPT12Q8IYM1 358 aa10.06□□□□□ -0.8
TTC39C-208ENST00000584095 SIX5Q8N196 739 aa10.06□□□□□ -0.8
TTC39C-208ENST00000584095 LARGE2Q8N3Y3 721 aa10.06□□□□□ -0.8
TTC39C-208ENST00000584095 WNT7BP56706 349 aa10.05□□□□□ -0.8
TTC39C-208ENST00000584095 CLP1Q92989 425 aaKnown RBP10.05□□□□□ -0.8
TTC39C-208ENST00000584095 KCTD15Q96SI1 283 aaPredicted RBP10.05□□□□□ -0.8
TTC39C-208ENST00000584095 VARSP26640 1264 aaKnown RBP10.04□□□□□ -0.8
TTC39C-208ENST00000584095 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
TTC39C-208ENST00000584095 PPP1R18Q6NYC8 613 aa10.04□□□□□ -0.8
TTC39C-208ENST00000584095 GNEQ9Y223 722 aaKnown RBP10.04□□□□□ -0.8
TTC39C-208ENST00000584095 PCDHGA11Q9Y5H2 935 aa10.04□□□□□ -0.8
TTC39C-208ENST00000584095 SSFA2P28290 1259 aa10.03□□□□□ -0.8
TTC39C-208ENST00000584095 RPIAP49247 311 aa10.03□□□□□ -0.8
TTC39C-208ENST00000584095 RAB15P59190 212 aa10.03□□□□□ -0.8
TTC39C-208ENST00000584095 INTS6LQ5JSJ4 861 aaKnown RBP10.03□□□□□ -0.8
TTC39C-208ENST00000584095 SPNS2Q8IVW8 549 aa10.03□□□□□ -0.8
TTC39C-208ENST00000584095 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
TTC39C-208ENST00000584095 MAP4K5Q9Y4K4 846 aa10.03□□□□□ -0.8
TTC39C-208ENST00000584095 SWI5Q1ZZU3 235 aa10.02□□□□□ -0.81
TTC39C-208ENST00000584095 CCDC125Q86Z20 511 aa10.02□□□□□ -0.81
TTC39C-208ENST00000584095 USP4Q13107 963 aa10.01□□□□□ -0.81
TTC39C-208ENST00000584095 VASH1Q7L8A9 365 aaPredicted RBP10.01□□□□□ -0.81
TTC39C-208ENST00000584095 TXNDC2Q86VQ3 553 aa10.01□□□□□ -0.81
TTC39C-208ENST00000584095 TPCN2Q8NHX9 752 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms