RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 EVC2Q86UK5 1308 aa29.39■■■□□ 2.29
SRSF1-206ENST00000583741 C11orf95C9JLR9 678 aaPredicted RBP29.38■■■□□ 2.29
SRSF1-206ENST00000583741 DDB1Q16531 1140 aa29.38■■■□□ 2.29
SRSF1-206ENST00000583741 WDR17Q8IZU2 1322 aa29.37■■■□□ 2.29
SRSF1-206ENST00000583741 PTF1AQ7RTS3 328 aa29.36■■■□□ 2.29
SRSF1-206ENST00000583741 TTC21BQ7Z4L5 1316 aa29.35■■■□□ 2.29
SRSF1-206ENST00000583741 PLSCR1O15162 318 aa29.33■■■□□ 2.29
SRSF1-206ENST00000583741 ARHGEF25Q86VW2 580 aa29.33■■■□□ 2.29
SRSF1-206ENST00000583741 NFAT5O94916 1531 aa29.33■■■□□ 2.29
SRSF1-206ENST00000583741 MARCH10Q8NA82 808 aaPredicted RBP29.32■■■□□ 2.28
SRSF1-206ENST00000583741 SPON1Q9HCB6 807 aa29.32■■■□□ 2.28
SRSF1-206ENST00000583741 CASZ1Q86V15 1759 aa29.32■■■□□ 2.28
SRSF1-206ENST00000583741 SOX12O15370 315 aa29.31■■■□□ 2.28
SRSF1-206ENST00000583741 SIN3AQ96ST3 1273 aa29.31■■■□□ 2.28
SRSF1-206ENST00000583741 ANO8Q9HCE9 1232 aaPredicted RBP29.31■■■□□ 2.28
SRSF1-206ENST00000583741 ROCK2O75116 1388 aaKnown RBP29.3■■■□□ 2.28
SRSF1-206ENST00000583741 KCNQ2O43526 872 aa29.3■■■□□ 2.28
SRSF1-206ENST00000583741 BCL11BQ9C0K0 894 aaPredicted RBP29.3■■■□□ 2.28
SRSF1-206ENST00000583741 BCL9O00512 1426 aa29.29■■■□□ 2.28
SRSF1-206ENST00000583741 MON2Q7Z3U7 1717 aa29.29■■■□□ 2.28
SRSF1-206ENST00000583741 KCNH5Q8NCM2 988 aa29.29■■■□□ 2.28
SRSF1-206ENST00000583741 ZNF692Q9BU19 519 aaPredicted RBP29.29■■■□□ 2.28
SRSF1-206ENST00000583741 PPP1R1BQ9UD71 204 aaPredicted RBP29.28■■■□□ 2.28
SRSF1-206ENST00000583741 TTC21AQ8NDW8 1320 aa29.27■■■□□ 2.28
SRSF1-206ENST00000583741 CDCA7Q9BWT1 371 aaPredicted RBP29.27■■■□□ 2.28
SRSF1-206ENST00000583741 CARD10Q9BWT7 1032 aa29.26■■■□□ 2.27
SRSF1-206ENST00000583741 PROM2Q8N271 834 aa29.25■■■□□ 2.27
SRSF1-206ENST00000583741 CSB-PGBD3P0DP91 1061 aa29.24■■■□□ 2.27
SRSF1-206ENST00000583741 KTN1Q86UP2 1357 aaKnown RBP29.24■■■□□ 2.27
SRSF1-206ENST00000583741 PDGFDQ9GZP0 370 aaPredicted RBP29.23■■■□□ 2.27
SRSF1-206ENST00000583741 ABCC6O95255 1503 aa29.23■■■□□ 2.27
SRSF1-206ENST00000583741 NINLQ9Y2I6 1382 aa29.23■■■□□ 2.27
SRSF1-206ENST00000583741 NEUROD1Q13562 356 aa29.22■■■□□ 2.27
SRSF1-206ENST00000583741 USP54Q70EL1 1684 aa29.21■■■□□ 2.27
SRSF1-206ENST00000583741 UTRNP46939 3433 aa29.21■■■□□ 2.27
SRSF1-206ENST00000583741 YY1P25490 414 aa29.21■■■□□ 2.27
SRSF1-206ENST00000583741 TNS2Q63HR2 1409 aa29.2■■■□□ 2.26
SRSF1-206ENST00000583741 CCDC7Q96M83 1385 aa29.18■■■□□ 2.26
SRSF1-206ENST00000583741 LTN1O94822 1766 aa29.18■■■□□ 2.26
SRSF1-206ENST00000583741 MYOM1P52179 1685 aa29.17■■■□□ 2.26
SRSF1-206ENST00000583741 CD163L1Q9NR16 1453 aa29.17■■■□□ 2.26
SRSF1-206ENST00000583741 NHSQ6T4R5 1651 aa29.17■■■□□ 2.26
SRSF1-206ENST00000583741 EXOC5O00471 708 aa29.17■■■□□ 2.26
SRSF1-206ENST00000583741 TXNRD1Q16881 649 aa29.16■■■□□ 2.26
SRSF1-206ENST00000583741 SBNO2Q9Y2G9 1366 aa29.15■■■□□ 2.26
SRSF1-206ENST00000583741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.15■■■□□ 2.26
SRSF1-206ENST00000583741 USP31Q70CQ4 1352 aa29.14■■■□□ 2.26
SRSF1-206ENST00000583741 ZBTB7AO95365 584 aa29.14■■■□□ 2.26
SRSF1-206ENST00000583741 NME9Q86XW9 330 aa29.12■■■□□ 2.25
SRSF1-206ENST00000583741 ERBB3P21860 1342 aa29.12■■■□□ 2.25
SRSF1-206ENST00000583741 PTGER2P43116 358 aa29.1■■■□□ 2.25
SRSF1-206ENST00000583741 SLC15A2Q16348 729 aa29.09■■■□□ 2.25
SRSF1-206ENST00000583741 CCER1Q8TC90 406 aaPredicted RBP29.09■■■□□ 2.25
SRSF1-206ENST00000583741 STK32BQ9NY57 414 aa29.09■■■□□ 2.25
SRSF1-206ENST00000583741 ATF5Q9Y2D1 282 aaPredicted RBP29.08■■■□□ 2.25
SRSF1-206ENST00000583741 BTAF1O14981 1849 aa29.07■■■□□ 2.24
SRSF1-206ENST00000583741 DCAF8L1A6NGE4 600 aa29.07■■■□□ 2.24
SRSF1-206ENST00000583741 NLRP2Q9NX02 1062 aa29.07■■■□□ 2.24
SRSF1-206ENST00000583741 PAPPAQ13219 1627 aa29.07■■■□□ 2.24
SRSF1-206ENST00000583741 ACSBG1Q96GR2 724 aa29.06■■■□□ 2.24
SRSF1-206ENST00000583741 TMC1Q8TDI8 760 aa29.04■■■□□ 2.24
SRSF1-206ENST00000583741 CARD11Q9BXL7 1154 aa29.04■■■□□ 2.24
SRSF1-206ENST00000583741 IL2RBP14784 551 aa29.03■■■□□ 2.24
SRSF1-206ENST00000583741 SLC12A5Q9H2X9 1139 aa29.03■■■□□ 2.24
SRSF1-206ENST00000583741 EDC4Q6P2E9 1401 aaKnown RBP29.03■■■□□ 2.24
SRSF1-206ENST00000583741 KAT6BQ8WYB5 2073 aa29.02■■■□□ 2.24
SRSF1-206ENST00000583741 ANKRD24Q8TF21 1146 aa29.02■■■□□ 2.24
SRSF1-206ENST00000583741 A0A1W2PP64 1363 aa29.02■■■□□ 2.24
SRSF1-206ENST00000583741 HDGFL2Q7Z4V5 671 aaPredicted RBP29■■■□□ 2.23
SRSF1-206ENST00000583741 SGIP1Q9BQI5 828 aa28.99■■■□□ 2.23
SRSF1-206ENST00000583741 MTFR1LQ9H019 292 aa28.98■■■□□ 2.23
SRSF1-206ENST00000583741 FHDC1Q9C0D6 1143 aaPredicted RBP28.97■■■□□ 2.23
SRSF1-206ENST00000583741 FAM208AQ9UK61 1670 aaKnown RBP28.96■■■□□ 2.23
SRSF1-206ENST00000583741 SYT17Q9BSW7 474 aa28.96■■■□□ 2.23
SRSF1-206ENST00000583741 TERF2IPQ9NYB0 399 aa28.94■■■□□ 2.22
SRSF1-206ENST00000583741 ZNF827Q17R98 1081 aa28.93■■■□□ 2.22
SRSF1-206ENST00000583741 LRRC4BQ9NT99 713 aa28.92■■■□□ 2.22
SRSF1-206ENST00000583741 GOLGB1Q14789 3259 aaKnown RBP28.91■■■□□ 2.22
SRSF1-206ENST00000583741 IP6K1Q92551 441 aa28.9■■■□□ 2.22
SRSF1-206ENST00000583741 RGPD2P0DJD1 1756 aa28.89■■■□□ 2.22
SRSF1-206ENST00000583741 CLSPNQ9HAW4 1339 aa28.89■■■□□ 2.22
SRSF1-206ENST00000583741 LTV1Q96GA3 475 aaPredicted RBP28.88■■■□□ 2.21
SRSF1-206ENST00000583741 PUS7Q96PZ0 661 aaKnown RBP28.88■■■□□ 2.21
SRSF1-206ENST00000583741 TONSLQ96HA7 1378 aa28.88■■■□□ 2.21
SRSF1-206ENST00000583741 QSER1Q2KHR3 1735 aa28.88■■■□□ 2.21
SRSF1-206ENST00000583741 SHANK3Q9BYB0 1731 aa28.88■■■□□ 2.21
SRSF1-206ENST00000583741 CHD4Q14839 1912 aa28.87■■■□□ 2.21
SRSF1-206ENST00000583741 DOT1LQ8TEK3 1739 aa28.87■■■□□ 2.21
SRSF1-206ENST00000583741 ARXQ96QS3 562 aa28.87■■■□□ 2.21
SRSF1-206ENST00000583741 TUBGCP6Q96RT7 1819 aa28.87■■■□□ 2.21
SRSF1-206ENST00000583741 DDX54Q8TDD1 881 aaKnown RBP28.86■■■□□ 2.21
SRSF1-206ENST00000583741 TESK2Q96S53 571 aa28.85■■■□□ 2.21
SRSF1-206ENST00000583741 MAP3K5Q99683 1374 aa28.84■■■□□ 2.21
SRSF1-206ENST00000583741 MAP3K19Q56UN5 1328 aa28.84■■■□□ 2.21
SRSF1-206ENST00000583741 ZNF784Q8NCA9 323 aaPredicted RBP28.84■■■□□ 2.21
SRSF1-206ENST00000583741 AKT1S1Q96B36 256 aa28.84■■■□□ 2.21
SRSF1-206ENST00000583741 FBLN1P23142 703 aa28.83■■■□□ 2.21
SRSF1-206ENST00000583741 COL24A1Q17RW2 1714 aa28.83■■■□□ 2.21
SRSF1-206ENST00000583741 LY75O60449 1722 aa28.81■■■□□ 2.2
SRSF1-206ENST00000583741 HOXC9P31274 260 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms