RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 RGPD3A6NKT7 1758 aaPredicted RBP16.46■□□□□ 0.22
GGA3-217ENST00000583667 RGPD4Q7Z3J3 1758 aa16.46■□□□□ 0.22
GGA3-217ENST00000583667 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
GGA3-217ENST00000583667 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
GGA3-217ENST00000583667 GOLGB1Q14789 3259 aaKnown RBP16.44■□□□□ 0.22
GGA3-217ENST00000583667 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
GGA3-217ENST00000583667 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
GGA3-217ENST00000583667 THRAP3Q9Y2W1 955 aaKnown RBP16.44■□□□□ 0.22
GGA3-217ENST00000583667 ANKARQ7Z5J8 1434 aa16.44■□□□□ 0.22
GGA3-217ENST00000583667 ANP32CO43423 234 aa16.43■□□□□ 0.22
GGA3-217ENST00000583667 PUS7Q96PZ0 661 aaKnown RBP16.43■□□□□ 0.22
GGA3-217ENST00000583667 OVOS2A0A0G2JMS6 1433 aa16.42■□□□□ 0.22
GGA3-217ENST00000583667 OVOS2A0A0J9YW53 1432 aa16.42■□□□□ 0.22
GGA3-217ENST00000583667 OVOS2Q6IE36 1432 aa16.42■□□□□ 0.22
GGA3-217ENST00000583667 TXNRD1Q16881 649 aa16.41■□□□□ 0.22
GGA3-217ENST00000583667 PELP1Q8IZL8 1130 aaKnown RBP16.41■□□□□ 0.22
GGA3-217ENST00000583667 PRAM1Q96QH2 718 aa16.41■□□□□ 0.22
GGA3-217ENST00000583667 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
GGA3-217ENST00000583667 CENPJQ9HC77 1338 aaPredicted RBP16.4■□□□□ 0.22
GGA3-217ENST00000583667 NGDNQ8NEJ9 315 aaKnown RBP16.38■□□□□ 0.21
GGA3-217ENST00000583667 PRR36Q9H6K5 1346 aa16.38■□□□□ 0.21
GGA3-217ENST00000583667 PARP4Q9UKK3 1724 aaKnown RBP16.37■□□□□ 0.21
GGA3-217ENST00000583667 SBF2Q86WG5 1849 aa16.37■□□□□ 0.21
GGA3-217ENST00000583667 CAPN15O75808 1086 aa16.36■□□□□ 0.21
GGA3-217ENST00000583667 NUTM2GQ5VZR2 741 aa16.36■□□□□ 0.21
GGA3-217ENST00000583667 TRAK1Q9UPV9 953 aa16.36■□□□□ 0.21
GGA3-217ENST00000583667 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
GGA3-217ENST00000583667 PER1O15534 1290 aaPredicted RBP16.35■□□□□ 0.21
GGA3-217ENST00000583667 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
GGA3-217ENST00000583667 GPBP1L1Q9HC44 474 aaPredicted RBP16.35■□□□□ 0.21
GGA3-217ENST00000583667 POGKQ9P215 609 aa16.35■□□□□ 0.21
GGA3-217ENST00000583667 KTN1Q86UP2 1357 aaKnown RBP16.35■□□□□ 0.21
GGA3-217ENST00000583667 ATP7BP35670 1465 aa16.35■□□□□ 0.21
GGA3-217ENST00000583667 DDB1Q16531 1140 aa16.34■□□□□ 0.21
GGA3-217ENST00000583667 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
GGA3-217ENST00000583667 GRIN3BO60391 1043 aa16.33■□□□□ 0.2
GGA3-217ENST00000583667 COL13A1Q5TAT6 717 aaPredicted RBP16.33■□□□□ 0.2
GGA3-217ENST00000583667 MARCH10Q8NA82 808 aaPredicted RBP16.33■□□□□ 0.2
GGA3-217ENST00000583667 PHRF1Q9P1Y6 1649 aaKnown RBP16.33■□□□□ 0.2
GGA3-217ENST00000583667 YBX3P16989 372 aaKnown RBP eCLIP16.32■□□□□ 0.2
GGA3-217ENST00000583667 ARHGEF28Q8N1W1 1705 aaKnown RBP16.32■□□□□ 0.2
GGA3-217ENST00000583667 DNAJC5GQ8N7S2 189 aa16.32■□□□□ 0.2
GGA3-217ENST00000583667 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
GGA3-217ENST00000583667 BCL9O00512 1426 aa16.3■□□□□ 0.2
GGA3-217ENST00000583667 CPDO75976 1380 aa16.3■□□□□ 0.2
GGA3-217ENST00000583667 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
GGA3-217ENST00000583667 AATKQ6ZMQ8 1374 aa16.29■□□□□ 0.2
GGA3-217ENST00000583667 PRELPP51888 382 aa16.29■□□□□ 0.2
GGA3-217ENST00000583667 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
GGA3-217ENST00000583667 CRB1P82279 1406 aa16.28■□□□□ 0.2
GGA3-217ENST00000583667 QRICH2Q9H0J4 1663 aa16.28■□□□□ 0.2
GGA3-217ENST00000583667 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
GGA3-217ENST00000583667 MINK1Q8N4C8 1332 aaPredicted RBP16.28■□□□□ 0.2
GGA3-217ENST00000583667 WASLO00401 505 aaPredicted RBP16.28■□□□□ 0.2
GGA3-217ENST00000583667 ZNF526Q8TF50 670 aaPredicted RBP16.28■□□□□ 0.2
GGA3-217ENST00000583667 COL5A2P05997 1499 aaPredicted RBP16.28■□□□□ 0.2
GGA3-217ENST00000583667 APLP1P51693 650 aa16.27■□□□□ 0.2
GGA3-217ENST00000583667 RALBP1Q15311 655 aa16.27■□□□□ 0.2
GGA3-217ENST00000583667 PANK3Q9H999 370 aa16.27■□□□□ 0.2
GGA3-217ENST00000583667 TULP4Q9NRJ4 1543 aa16.27■□□□□ 0.2
GGA3-217ENST00000583667 LRRC37A3O60309 1634 aa16.27■□□□□ 0.19
GGA3-217ENST00000583667 NPC1L1Q9UHC9 1359 aa16.26■□□□□ 0.19
GGA3-217ENST00000583667 SLC34A2O95436 690 aa16.26■□□□□ 0.19
GGA3-217ENST00000583667 POLD1P28340 1107 aa16.26■□□□□ 0.19
GGA3-217ENST00000583667 ZNF827Q17R98 1081 aa16.25■□□□□ 0.19
GGA3-217ENST00000583667 SLC16A10Q8TF71 515 aa16.25■□□□□ 0.19
GGA3-217ENST00000583667 GCP02774 474 aa16.23■□□□□ 0.19
GGA3-217ENST00000583667 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
GGA3-217ENST00000583667 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
GGA3-217ENST00000583667 ADCY9O60503 1353 aa16.23■□□□□ 0.19
GGA3-217ENST00000583667 USP19O94966 1318 aa16.22■□□□□ 0.19
GGA3-217ENST00000583667 KIF3CO14782 793 aa16.22■□□□□ 0.19
GGA3-217ENST00000583667 TOM1L2Q6ZVM7 507 aa16.22■□□□□ 0.19
GGA3-217ENST00000583667 NUDT16Q96DE0 195 aaKnown RBP16.22■□□□□ 0.19
GGA3-217ENST00000583667 CDCA7Q9BWT1 371 aaPredicted RBP16.21■□□□□ 0.19
GGA3-217ENST00000583667 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
GGA3-217ENST00000583667 LRRC4BQ9NT99 713 aa16.2■□□□□ 0.18
GGA3-217ENST00000583667 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
GGA3-217ENST00000583667 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
GGA3-217ENST00000583667 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
GGA3-217ENST00000583667 ACEP12821 1306 aa16.18■□□□□ 0.18
GGA3-217ENST00000583667 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
GGA3-217ENST00000583667 COL24A1Q17RW2 1714 aa16.17■□□□□ 0.18
GGA3-217ENST00000583667 POLR3AO14802 1390 aaPredicted RBP16.17■□□□□ 0.18
GGA3-217ENST00000583667 ZBTB7CA1YPR0 619 aa16.17■□□□□ 0.18
GGA3-217ENST00000583667 EXOC5O00471 708 aa16.17■□□□□ 0.18
GGA3-217ENST00000583667 CENPBP07199 599 aaPredicted RBP16.17■□□□□ 0.18
GGA3-217ENST00000583667 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
GGA3-217ENST00000583667 PNPLA7Q6ZV29 1317 aa16.17■□□□□ 0.18
GGA3-217ENST00000583667 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
GGA3-217ENST00000583667 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
GGA3-217ENST00000583667 CARD14Q9BXL6 1004 aa16.16■□□□□ 0.18
GGA3-217ENST00000583667 JMYQ8N9B5 988 aa16.15■□□□□ 0.18
GGA3-217ENST00000583667 CDK19Q9BWU1 502 aa16.15■□□□□ 0.18
GGA3-217ENST00000583667 SLC12A5Q9H2X9 1139 aa16.15■□□□□ 0.18
GGA3-217ENST00000583667 AXIN2Q9Y2T1 843 aa16.15■□□□□ 0.18
GGA3-217ENST00000583667 AKAP12Q02952 1782 aa16.15■□□□□ 0.18
GGA3-217ENST00000583667 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
GGA3-217ENST00000583667 TOPAZ1Q8N9V7 1692 aa16.14■□□□□ 0.18
GGA3-217ENST00000583667 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms