RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NFAT5O94916 1531 aa34.92■■■■□ 3.18
TSEN54-209ENST00000583454 PSDA5PKW4 1024 aaPredicted RBP34.92■■■■□ 3.18
TSEN54-209ENST00000583454 CD163L1Q9NR16 1453 aa34.9■■■■□ 3.18
TSEN54-209ENST00000583454 EZH2Q15910 746 aaKnown RBP34.9■■■■□ 3.18
TSEN54-209ENST00000583454 CAMKK2Q96RR4 588 aa34.9■■■■□ 3.18
TSEN54-209ENST00000583454 PDE3BQ13370 1112 aa34.89■■■■□ 3.18
TSEN54-209ENST00000583454 PUS7Q96PZ0 661 aaKnown RBP34.89■■■■□ 3.18
TSEN54-209ENST00000583454 SBF2Q86WG5 1849 aa34.88■■■■□ 3.17
TSEN54-209ENST00000583454 TTC21AQ8NDW8 1320 aa34.88■■■■□ 3.17
TSEN54-209ENST00000583454 ZBTB7CA1YPR0 619 aa34.88■■■■□ 3.17
TSEN54-209ENST00000583454 AXIN2Q9Y2T1 843 aa34.88■■■■□ 3.17
TSEN54-209ENST00000583454 NUP188Q5SRE5 1749 aa34.88■■■■□ 3.17
TSEN54-209ENST00000583454 KTN1Q86UP2 1357 aaKnown RBP34.87■■■■□ 3.17
TSEN54-209ENST00000583454 ARHGEF25Q86VW2 580 aa34.86■■■■□ 3.17
TSEN54-209ENST00000583454 PARD3Q8TEW0 1356 aa34.84■■■■□ 3.17
TSEN54-209ENST00000583454 WDR17Q8IZU2 1322 aa34.82■■■■□ 3.17
TSEN54-209ENST00000583454 APBA3O96018 575 aa34.82■■■■□ 3.16
TSEN54-209ENST00000583454 KCNH5Q8NCM2 988 aa34.81■■■■□ 3.16
TSEN54-209ENST00000583454 ABCC6O95255 1503 aa34.81■■■■□ 3.16
TSEN54-209ENST00000583454 R3HDM1Q15032 1099 aaKnown RBP34.79■■■■□ 3.16
TSEN54-209ENST00000583454 USP31Q70CQ4 1352 aa34.78■■■■□ 3.16
TSEN54-209ENST00000583454 TMF1P82094 1093 aa34.78■■■■□ 3.16
TSEN54-209ENST00000583454 EIF4G2P78344 907 aaKnown RBP eCLIP34.77■■■■□ 3.16
TSEN54-209ENST00000583454 TOM1L2Q6ZVM7 507 aa34.77■■■■□ 3.16
TSEN54-209ENST00000583454 OVOS2A0A0G2JMS6 1433 aa34.77■■■■□ 3.16
TSEN54-209ENST00000583454 OVOS2A0A0J9YW53 1432 aa34.77■■■■□ 3.16
TSEN54-209ENST00000583454 OVOS2Q6IE36 1432 aa34.77■■■■□ 3.16
TSEN54-209ENST00000583454 RGPD3A6NKT7 1758 aaPredicted RBP34.77■■■■□ 3.16
TSEN54-209ENST00000583454 LTN1O94822 1766 aa34.77■■■■□ 3.16
TSEN54-209ENST00000583454 RGPD4Q7Z3J3 1758 aa34.77■■■■□ 3.16
TSEN54-209ENST00000583454 SOX12O15370 315 aa34.76■■■■□ 3.16
TSEN54-209ENST00000583454 HSPA5P11021 654 aaKnown RBP34.72■■■■□ 3.15
TSEN54-209ENST00000583454 DDB1Q16531 1140 aa34.71■■■■□ 3.15
TSEN54-209ENST00000583454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.71■■■■□ 3.15
TSEN54-209ENST00000583454 SLC12A5Q9H2X9 1139 aa34.71■■■■□ 3.15
TSEN54-209ENST00000583454 NME9Q86XW9 330 aa34.7■■■■□ 3.15
TSEN54-209ENST00000583454 CARD10Q9BWT7 1032 aa34.7■■■■□ 3.15
TSEN54-209ENST00000583454 CDCA8Q53HL2 280 aa34.69■■■■□ 3.14
TSEN54-209ENST00000583454 TMC1Q8TDI8 760 aa34.69■■■■□ 3.14
TSEN54-209ENST00000583454 EDC4Q6P2E9 1401 aaKnown RBP34.69■■■■□ 3.14
TSEN54-209ENST00000583454 A0A1W2PP64 1363 aa34.68■■■■□ 3.14
TSEN54-209ENST00000583454 C11orf95C9JLR9 678 aaPredicted RBP34.68■■■■□ 3.14
TSEN54-209ENST00000583454 NINLQ9Y2I6 1382 aa34.67■■■■□ 3.14
TSEN54-209ENST00000583454 BCL9O00512 1426 aa34.66■■■■□ 3.14
TSEN54-209ENST00000583454 MARCH10Q8NA82 808 aaPredicted RBP34.65■■■■□ 3.14
TSEN54-209ENST00000583454 CDCA7Q9BWT1 371 aaPredicted RBP34.65■■■■□ 3.14
TSEN54-209ENST00000583454 PTF1AQ7RTS3 328 aa34.64■■■■□ 3.14
TSEN54-209ENST00000583454 HDGFL2Q7Z4V5 671 aaPredicted RBP34.62■■■■□ 3.13
TSEN54-209ENST00000583454 TERF2IPQ9NYB0 399 aa34.62■■■■□ 3.13
TSEN54-209ENST00000583454 CCDC7Q96M83 1385 aa34.62■■■■□ 3.13
TSEN54-209ENST00000583454 CSB-PGBD3P0DP91 1061 aa34.61■■■■□ 3.13
TSEN54-209ENST00000583454 ERBB3P21860 1342 aa34.59■■■■□ 3.13
TSEN54-209ENST00000583454 TNS2Q63HR2 1409 aa34.58■■■■□ 3.13
TSEN54-209ENST00000583454 PLSCR1O15162 318 aa34.56■■■■□ 3.12
TSEN54-209ENST00000583454 BCL11BQ9C0K0 894 aaPredicted RBP34.56■■■■□ 3.12
TSEN54-209ENST00000583454 NHSQ6T4R5 1651 aa34.53■■■■□ 3.12
TSEN54-209ENST00000583454 NBPF14Q5TI25 921 aa34.52■■■■□ 3.12
TSEN54-209ENST00000583454 ANKRD36BQ8N2N9 1353 aa34.51■■■■□ 3.12
TSEN54-209ENST00000583454 CASZ1Q86V15 1759 aa34.51■■■■□ 3.11
TSEN54-209ENST00000583454 EXOC5O00471 708 aa34.5■■■■□ 3.11
TSEN54-209ENST00000583454 FAM208AQ9UK61 1670 aaKnown RBP34.5■■■■□ 3.11
TSEN54-209ENST00000583454 PROM2Q8N271 834 aa34.49■■■■□ 3.11
TSEN54-209ENST00000583454 MYOM1P52179 1685 aa34.48■■■■□ 3.11
TSEN54-209ENST00000583454 ANKRD24Q8TF21 1146 aa34.47■■■■□ 3.11
TSEN54-209ENST00000583454 ANO8Q9HCE9 1232 aaPredicted RBP34.47■■■■□ 3.11
TSEN54-209ENST00000583454 NLRP2Q9NX02 1062 aa34.46■■■■□ 3.11
TSEN54-209ENST00000583454 RGPD2P0DJD1 1756 aa34.43■■■■□ 3.1
TSEN54-209ENST00000583454 IL2RBP14784 551 aa34.41■■■■□ 3.1
TSEN54-209ENST00000583454 IP6K1Q92551 441 aa34.41■■■■□ 3.1
TSEN54-209ENST00000583454 BTAF1O14981 1849 aa34.41■■■■□ 3.1
TSEN54-209ENST00000583454 KCNQ2O43526 872 aa34.4■■■■□ 3.1
TSEN54-209ENST00000583454 POLR3GLQ9BT43 218 aa34.39■■■■□ 3.1
TSEN54-209ENST00000583454 MAP3K19Q56UN5 1328 aa34.37■■■■□ 3.09
TSEN54-209ENST00000583454 CARD14Q9BXL6 1004 aa34.37■■■■□ 3.09
TSEN54-209ENST00000583454 SHANK3Q9BYB0 1731 aa34.35■■■■□ 3.09
TSEN54-209ENST00000583454 PAPPAQ13219 1627 aa34.35■■■■□ 3.09
TSEN54-209ENST00000583454 FBLN1P23142 703 aa34.35■■■■□ 3.09
TSEN54-209ENST00000583454 TXNRD1Q16881 649 aa34.35■■■■□ 3.09
TSEN54-209ENST00000583454 COG3Q96JB2 828 aa34.35■■■■□ 3.09
TSEN54-209ENST00000583454 KIF20BQ96Q89 1820 aa34.34■■■■□ 3.09
TSEN54-209ENST00000583454 KAT6BQ8WYB5 2073 aa34.34■■■■□ 3.09
TSEN54-209ENST00000583454 PDGFDQ9GZP0 370 aaPredicted RBP34.33■■■■□ 3.09
TSEN54-209ENST00000583454 SPON1Q9HCB6 807 aa34.33■■■■□ 3.09
TSEN54-209ENST00000583454 KIF7Q2M1P5 1343 aa34.32■■■■□ 3.09
TSEN54-209ENST00000583454 ACSBG1Q96GR2 724 aa34.32■■■■□ 3.08
TSEN54-209ENST00000583454 HOXC9P31274 260 aa34.31■■■■□ 3.08
TSEN54-209ENST00000583454 FYB1O15117 783 aa34.3■■■■□ 3.08
TSEN54-209ENST00000583454 LTV1Q96GA3 475 aaPredicted RBP34.29■■■■□ 3.08
TSEN54-209ENST00000583454 NSD3Q9BZ95 1437 aa34.27■■■■□ 3.08
TSEN54-209ENST00000583454 RTL1A6NKG5 1358 aa34.26■■■■□ 3.08
TSEN54-209ENST00000583454 PANK3Q9H999 370 aa34.25■■■■□ 3.07
TSEN54-209ENST00000583454 DOT1LQ8TEK3 1739 aa34.24■■■■□ 3.07
TSEN54-209ENST00000583454 MEGF6O75095 1541 aa34.24■■■■□ 3.07
TSEN54-209ENST00000583454 AMPHP49418 695 aa34.23■■■■□ 3.07
TSEN54-209ENST00000583454 SLC15A2Q16348 729 aa34.23■■■■□ 3.07
TSEN54-209ENST00000583454 GGNBP2Q9H3C7 697 aa34.23■■■■□ 3.07
TSEN54-209ENST00000583454 ZEB1P37275 1124 aaPredicted RBP34.21■■■■□ 3.07
TSEN54-209ENST00000583454 RRS1Q15050 365 aaKnown RBP34.21■■■■□ 3.07
TSEN54-209ENST00000583454 STK32BQ9NY57 414 aa34.2■■■■□ 3.07
TSEN54-209ENST00000583454 WASHC2AQ641Q2 1341 aa34.2■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms