RNA–Protein interactions for RNA: ENST00000583312.5

ACADVL-233, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 3

Gene ACADVL, Length 799 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-233	ENST00000583312	BARGIN	Q6ZT62	677 aa		31.72	■■■□□ 2.67
ACADVL-233	ENST00000583312	TCP11L2	Q8N4U5	519 aa		31.72	■■■□□ 2.67
ACADVL-233	ENST00000583312	CCDC125	Q86Z20	511 aa		31.71	■■■□□ 2.67
ACADVL-233	ENST00000583312	AXIN2	Q9Y2T1	843 aa		31.71	■■■□□ 2.67
ACADVL-233	ENST00000583312	CRB1	P82279	1406 aa		31.71	■■■□□ 2.67
ACADVL-233	ENST00000583312	COL18A1	P39060	1754 aa		31.71	■■■□□ 2.67
ACADVL-233	ENST00000583312	HSPA5	P11021	654 aa	Known RBP	31.68	■■■□□ 2.66
ACADVL-233	ENST00000583312	THRAP3	Q9Y2W1	955 aa	Known RBP	31.68	■■■□□ 2.66
ACADVL-233	ENST00000583312	ABCC6	O95255	1503 aa		31.68	■■■□□ 2.66
ACADVL-233	ENST00000583312	WDR17	Q8IZU2	1322 aa		31.67	■■■□□ 2.66
ACADVL-233	ENST00000583312	BLM	P54132	1417 aa	Predicted RBP	31.66	■■■□□ 2.66
ACADVL-233	ENST00000583312	TOM1L2	Q6ZVM7	507 aa		31.66	■■■□□ 2.66
ACADVL-233	ENST00000583312	COG3	Q96JB2	828 aa		31.65	■■■□□ 2.66
ACADVL-233	ENST00000583312	CSB-PGBD3	P0DP91	1061 aa		31.62	■■■□□ 2.65
ACADVL-233	ENST00000583312	MYOM1	P52179	1685 aa		31.62	■■■□□ 2.65
ACADVL-233	ENST00000583312	FAM182B	Q5T319	152 aa		31.59	■■■□□ 2.65
ACADVL-233	ENST00000583312	POLR3GL	Q9BT43	218 aa		31.59	■■■□□ 2.65
ACADVL-233	ENST00000583312	FYB1	O15117	783 aa		31.58	■■■□□ 2.65
ACADVL-233	ENST00000583312	SF3B2	Q13435	895 aa	Known RBP	31.58	■■■□□ 2.65
ACADVL-233	ENST00000583312	PDE3B	Q13370	1112 aa		31.57	■■■□□ 2.64
ACADVL-233	ENST00000583312	CARD10	Q9BWT7	1032 aa		31.56	■■■□□ 2.64
ACADVL-233	ENST00000583312	CARD14	Q9BXL6	1004 aa		31.56	■■■□□ 2.64
ACADVL-233	ENST00000583312	GGNBP2	Q9H3C7	697 aa		31.56	■■■□□ 2.64
ACADVL-233	ENST00000583312	NSD3	Q9BZ95	1437 aa		31.56	■■■□□ 2.64
ACADVL-233	ENST00000583312	LTN1	O94822	1766 aa		31.56	■■■□□ 2.64
ACADVL-233	ENST00000583312	ERBB3	P21860	1342 aa		31.55	■■■□□ 2.64
ACADVL-233	ENST00000583312	RGPD5	Q99666	1765 aa		31.54	■■■□□ 2.64
ACADVL-233	ENST00000583312	FAM196A	Q6ZSG2	479 aa		31.52	■■■□□ 2.64
ACADVL-233	ENST00000583312	PARP4	Q9UKK3	1724 aa	Known RBP	31.52	■■■□□ 2.64
ACADVL-233	ENST00000583312	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.51	■■■□□ 2.63
ACADVL-233	ENST00000583312	CCDC7	Q96M83	1385 aa		31.51	■■■□□ 2.63
ACADVL-233	ENST00000583312	MAP3K19	Q56UN5	1328 aa		31.5	■■■□□ 2.63
ACADVL-233	ENST00000583312	ANKRD24	Q8TF21	1146 aa		31.5	■■■□□ 2.63
ACADVL-233	ENST00000583312	IP6K1	Q92551	441 aa		31.5	■■■□□ 2.63
ACADVL-233	ENST00000583312	DEFB132	Q7Z7B7	95 aa		31.49	■■■□□ 2.63
ACADVL-233	ENST00000583312	FBLN1	P23142	703 aa		31.48	■■■□□ 2.63
ACADVL-233	ENST00000583312	NLRP2	Q9NX02	1062 aa		31.48	■■■□□ 2.63
ACADVL-233	ENST00000583312	AMPH	P49418	695 aa		31.47	■■■□□ 2.63
ACADVL-233	ENST00000583312	DDB1	Q16531	1140 aa		31.47	■■■□□ 2.63
ACADVL-233	ENST00000583312	KIF20B	Q96Q89	1820 aa		31.47	■■■□□ 2.63
ACADVL-233	ENST00000583312	DISP2	A7MBM2	1401 aa		31.46	■■■□□ 2.63
ACADVL-233	ENST00000583312	LRRC37A3	O60309	1634 aa		31.46	■■■□□ 2.63
ACADVL-233	ENST00000583312	CGNL1	Q0VF96	1302 aa		31.45	■■■□□ 2.62
ACADVL-233	ENST00000583312	HOXC9	P31274	260 aa		31.44	■■■□□ 2.62
ACADVL-233	ENST00000583312	BAG6	P46379	1132 aa		31.44	■■■□□ 2.62
ACADVL-233	ENST00000583312	RTL1	A6NKG5	1358 aa		31.43	■■■□□ 2.62
ACADVL-233	ENST00000583312	WNK3	Q9BYP7	1800 aa		31.43	■■■□□ 2.62
ACADVL-233	ENST00000583312	RRS1	Q15050	365 aa	Known RBP	31.43	■■■□□ 2.62
ACADVL-233	ENST00000583312	RGPD1	P0DJD0	1748 aa		31.42	■■■□□ 2.62
ACADVL-233	ENST00000583312	C11orf95	C9JLR9	678 aa	Predicted RBP	31.42	■■■□□ 2.62
ACADVL-233	ENST00000583312	TRIM37	O94972	964 aa		31.42	■■■□□ 2.62
ACADVL-233	ENST00000583312	LTV1	Q96GA3	475 aa	Predicted RBP	31.41	■■■□□ 2.62
ACADVL-233	ENST00000583312	OVOS2	A0A0G2JMS6	1433 aa		31.41	■■■□□ 2.62
ACADVL-233	ENST00000583312	PANK3	Q9H999	370 aa		31.39	■■■□□ 2.62
ACADVL-233	ENST00000583312	EXOC5	O00471	708 aa		31.36	■■■□□ 2.61
ACADVL-233	ENST00000583312	TNS1	Q9HBL0	1735 aa	Known RBP	31.35	■■■□□ 2.61
ACADVL-233	ENST00000583312	TNS2	Q63HR2	1409 aa		31.35	■■■□□ 2.61
ACADVL-233	ENST00000583312	IL2RB	P14784	551 aa		31.35	■■■□□ 2.61
ACADVL-233	ENST00000583312	KIF24	Q5T7B8	1368 aa		31.34	■■■□□ 2.61
ACADVL-233	ENST00000583312	KIF7	Q2M1P5	1343 aa		31.34	■■■□□ 2.61
ACADVL-233	ENST00000583312	EN1	Q05925	392 aa	Predicted RBP	31.34	■■■□□ 2.61
ACADVL-233	ENST00000583312	MARCH10	Q8NA82	808 aa	Predicted RBP	31.34	■■■□□ 2.61
ACADVL-233	ENST00000583312	FAM208A	Q9UK61	1670 aa	Known RBP	31.34	■■■□□ 2.61
ACADVL-233	ENST00000583312	FLT4	P35916	1363 aa		31.33	■■■□□ 2.61
ACADVL-233	ENST00000583312	PEAK1	Q9H792	1746 aa		31.33	■■■□□ 2.61
ACADVL-233	ENST00000583312	APBA3	O96018	575 aa		31.31	■■■□□ 2.6
ACADVL-233	ENST00000583312	SMG6	Q86US8	1419 aa	Known RBP	31.31	■■■□□ 2.6
ACADVL-233	ENST00000583312	BCL9	O00512	1426 aa		31.3	■■■□□ 2.6
ACADVL-233	ENST00000583312	INSR	P06213	1382 aa		31.3	■■■□□ 2.6
ACADVL-233	ENST00000583312	HSP90AB2P	Q58FF8	381 aa		31.29	■■■□□ 2.6
ACADVL-233	ENST00000583312	EMILIN1	Q9Y6C2	1016 aa		31.28	■■■□□ 2.6
ACADVL-233	ENST00000583312	NSD2	O96028	1365 aa		31.26	■■■□□ 2.59
ACADVL-233	ENST00000583312	PPM1G	O15355	546 aa	Predicted RBP	31.25	■■■□□ 2.59
ACADVL-233	ENST00000583312	PARD3	Q8TEW0	1356 aa		31.25	■■■□□ 2.59
ACADVL-233	ENST00000583312	EZH2	Q15910	746 aa	Known RBP	31.24	■■■□□ 2.59
ACADVL-233	ENST00000583312	CAMKK2	Q96RR4	588 aa		31.24	■■■□□ 2.59
ACADVL-233	ENST00000583312	NBPF6	Q5VWK0	638 aa		31.23	■■■□□ 2.59
ACADVL-233	ENST00000583312	NBPF4	Q96M43	638 aa		31.23	■■■□□ 2.59
ACADVL-233	ENST00000583312	KNSTRN	Q9Y448	316 aa		31.23	■■■□□ 2.59
ACADVL-233	ENST00000583312	ANKRD26	Q9UPS8	1709 aa		31.22	■■■□□ 2.59
ACADVL-233	ENST00000583312	TNNT2	P45379	298 aa	Predicted RBP	31.21	■■■□□ 2.59
ACADVL-233	ENST00000583312	BCL11B	Q9C0K0	894 aa	Predicted RBP	31.21	■■■□□ 2.59
ACADVL-233	ENST00000583312	POLK	Q9UBT6	870 aa		31.2	■■■□□ 2.59
ACADVL-233	ENST00000583312	SRCAP	Q6ZRS2	3230 aa		31.2	■■■□□ 2.58
ACADVL-233	ENST00000583312	WASHC2A	Q641Q2	1341 aa		31.19	■■■□□ 2.58
ACADVL-233	ENST00000583312	USHBP1	Q8N6Y0	703 aa		31.18	■■■□□ 2.58
ACADVL-233	ENST00000583312	MEGF6	O75095	1541 aa		31.18	■■■□□ 2.58
ACADVL-233	ENST00000583312	PTF1A	Q7RTS3	328 aa		31.17	■■■□□ 2.58
ACADVL-233	ENST00000583312	RGPD2	P0DJD1	1756 aa		31.17	■■■□□ 2.58
ACADVL-233	ENST00000583312	SBF2	Q86WG5	1849 aa		31.17	■■■□□ 2.58
ACADVL-233	ENST00000583312	MORC1	Q86VD1	984 aa		31.15	■■■□□ 2.58
ACADVL-233	ENST00000583312	DDX54	Q8TDD1	881 aa	Known RBP	31.14	■■■□□ 2.58
ACADVL-233	ENST00000583312	RAPGEF4	Q8WZA2	1011 aa		31.14	■■■□□ 2.58
ACADVL-233	ENST00000583312	AMER1	Q5JTC6	1135 aa	Predicted RBP	31.13	■■■□□ 2.57
ACADVL-233	ENST00000583312	ZCRB1	Q8TBF4	217 aa	Known RBP	31.12	■■■□□ 2.57
ACADVL-233	ENST00000583312	PLSCR1	O15162	318 aa		31.11	■■■□□ 2.57
ACADVL-233	ENST00000583312	MAP2	P11137	1827 aa	Known RBP	31.11	■■■□□ 2.57
ACADVL-233	ENST00000583312	KCNQ2	O43526	872 aa		31.1	■■■□□ 2.57
ACADVL-233	ENST00000583312	ACSBG1	Q96GR2	724 aa		31.1	■■■□□ 2.57
ACADVL-233	ENST00000583312	PSD	A5PKW4	1024 aa	Predicted RBP	31.09	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms